mRNA_L-elsbetiae_contig7077.15882.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_L-elsbetiae_contig7077.15882.1
Unique Name	mRNA_L-elsbetiae_contig7077.15882.1
Type	mRNA
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)

Homology

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BLAST of mRNA_L-elsbetiae_contig7077.15882.1 vs. uniprot
Match: D7FTK5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTK5_ECTSI)

HSP 1 Score: 343 bits (879), Expect = 1.910e-113
Identity = 178/287 (62.02%), Postives = 222/287 (77.35%), Query Frame = 1

Query:    1 MSFALSCESDYFVAGLIEGENFATPVRVIGTLIAVSVASNWCCRTKIKRLSLFFSHWLSGLVFGLGFIVEDMMVSVCWASSNVEGFIKTVKFIELTAANMLAITNLGICVNLAFIVLSHRTMTRVSSVSSLPLLLLFLALSLVIATLVVPFWDTIVVLGTSFVIIHPDQVKDDFIDVISLFLVEFVVGICMLLIIAWLLWYRMKEVKECWKMHRRIRYYFGLTILGTAVNLGIGICGTMFVAGGQVRPVLIIVSWALRYIHIALDTVVLFGVLRERDMDERSDRNRS 861
            M   LSCE+ +   GL EGE+  TP+RV+ TL++VSV S WC  TK+KRLSLFF+HWLSGLV+GL F+VEDMMV+VCW  S++ GFIK VKFIE  ++NM+AIT+L ICVNLA IV SHRT+TRV SVSS  LL L LA+S+ I ++ VP W+T+ V+GT F I++ DQ   D + V+S+F +EF+VGICM +I+AWLL +RMKEVKECW++  RIRYYF LT+LGTAVN+GIGIC T+FV G    P L I SW  RYIH+ALDT VL+GVLRE+DMDER    RS
Sbjct:    1 MPTILSCETGFTAIGLQEGEDKITPIRVLSTLVSVSVVSAWCSWTKVKRLSLFFAHWLSGLVWGLCFVVEDMMVTVCWTESDLIGFIKAVKFIEFVSSNMMAITHLAICVNLALIVSSHRTLTRVQSVSSPWLLSLLLAISIGITSVTVPLWETVYVIGTGFWIVNSDQGSYDAV-VVSIFFLEFMVGICMFVILAWLLLFRMKEVKECWRIDARIRYYFCLTLLGTAVNIGIGICSTVFVIGDMDEPRLAIWSWVSRYIHVALDTFVLYGVLREKDMDERGGNARS 286

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BLAST of mRNA_L-elsbetiae_contig7077.15882.1 vs. uniprot
Match: D8LNM4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNM4_ECTSI)

HSP 1 Score: 266 bits (679), Expect = 5.120e-84
Identity = 142/242 (58.68%), Postives = 180/242 (74.38%), Query Frame = 1

Query:    7 FALSCESDYFVAGLIEGENFATPVRVIGTLIAVSVASNWCCRTK-IKRLSLFFSHWLSGLVFGLGFIVEDMMVSVCWASSNVEGFIKTVKFIELTAANMLAITNLGICVNLAFIVLSHRTMTRVSSVSSLPLLLLFLALSLVIATLVVPFWDTIVVLGTSFVIIHPDQVKDDFIDVISLFLVEFVVGICMLLIIAWLLWYRMKEVKECWKMHRRIRYYFGLTILGTAVNLGIGICGTMFVAG 729
            F+L C + +FV GL EGE   TP+RVI TLI +SVAS W  R K IK+L LFFSHWLSGL+  L F+ E  MVSVCWA  ++   IKT+KF EL A+NMLAITNL ICVNLA IV+SHRT++RV S S+  L+L+FLALSL +A + VPFW  +VV GT+F +   +Q   D+I V++ F VEF VGICML+I+ WL+ +R  E+K+ WKMH RIRYYFGLT++ T VNL +GICGT++V G
Sbjct:   28 FSLKCNAGFFVVGLQEGEAVCTPIRVISTLITMSVASAWFSRRKSIKKLLLFFSHWLSGLLHQLVFMTEATMVSVCWAGDSLTKLIKTLKFFELAASNMLAITNLAICVNLALIVMSHRTLSRVRSASTPALILVFLALSLGVAAISVPFWTEMVVSGTAFWVQTHEQAAHDWI-VVAGFFVEFFVGICMLVIVVWLVIFRRTEIKQSWKMHARIRYYFGLTLIATGVNLALGICGTIYVVG 268

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BLAST of mRNA_L-elsbetiae_contig7077.15882.1 vs. uniprot
Match: D7FTK4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTK4_ECTSI)

HSP 1 Score: 259 bits (661), Expect = 3.540e-81
Identity = 132/223 (59.19%), Postives = 176/223 (78.92%), Query Frame = 1

Query:  175 SGLVFGLGFIVEDMMVSVCWASSNVEGFIKTVKFIELTAANMLAITNLGICVNLAFIVLSHRTMTRVSSVSSLPLLLLFLALSLVIATLVVPFWDTIVVLGTSFVIIHPDQVKDDFIDVISLFLVEFVVGICMLLIIAWLLWYRMKEVKECWKMHRRIRYYFGLTILGTAVNLGIGICGTMFVAGGQVRPVLIIVSWALRYIHIALDTVVLFGVLRERDMDER 843
            +G+++ L ++VEDMMV+VCWA  N+E  IKTVKF+EL +++MLA+T+L ICVNLA IV SHRT+ RV SVSS  LL L LA+S+ +    VP W+T++V+GTSF I++ DQ K D + V+S+F +EF+VG+CM +I+AWLL +R+KEVKECW++H RIRYY  LT+LGT ++L IGIC T+FV GG  +  L I +W  RYIHIALDT VL+GVLRE+DMDER
Sbjct:   10 TGIIWSLCWLVEDMMVTVCWAGKNLEDLIKTVKFVELASSHMLALTHLAICVNLALIVSSHRTLKRVQSVSSPGLLTLMLAISMGMTAATVPLWETVIVVGTSFWIVNSDQGKYDAV-VVSIFFLEFIVGLCMFVIVAWLLLFRLKEVKECWRIHARIRYYLCLTVLGTGISLSIGICSTVFVLGGLKQTRLAIWAWVFRYIHIALDTFVLYGVLREKDMDER 231

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BLAST of mRNA_L-elsbetiae_contig7077.15882.1 vs. uniprot
Match: A0A6H5JWL8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWL8_9PHAE)

HSP 1 Score: 248 bits (634), Expect = 4.100e-77
Identity = 131/243 (53.91%), Postives = 179/243 (73.66%), Query Frame = 1

Query:  175 SGLVFGLGFIVEDMMVSVCWASSNVEGFIKTVKFIELTAANMLAITNLGICVNLAFIVLSHRTMTRVSSVSSLPLLLLFLALSLVIATLVVPFWDTIVVLGTSFVIIHPDQVKDDFIDVISLFLVEFVVGICMLLIIAWLLWYRMKEVKECWKMHRRIRYYFGLTILGTAVNLGIGICGTMFVAGGQVRPVLIIVSWALRYIHIALDTVVLFGVLRERDMDERSDRNRSLQERT--TASGISR 897
            SG +  L  + ED+MVS C+A++N+ G IKT+ F+ +T++NMLA TNLGIC+NLA IV SHRTMTRV +VSS  +L + L +S  +A   VP W+T VVLGT F   + D VK+DFI ++S++++EF+VGICML+I+ WL  +RM E+KECW+ H RIRYYF LT+ GTAVNLG+GICG  +V G +  P+  I SW  RYIHI+ DT+VL+G LRE  +DER++ +RS Q+     ASG++R
Sbjct:    9 SGTLVCLALMTEDVMVSACYAATNLVGLIKTINFVMMTSSNMLAATNLGICINLALIVSSHRTMTRVKTVSSPRVLFIMLLVSASLAAATVPLWETTVVLGTHFWFTNSDPVKNDFI-IMSIYIIEFLVGICMLVIVFWLAMFRMTEIKECWRFHSRIRYYFCLTLFGTAVNLGLGICGAAYVFGDRKEPLPQIWSWLFRYIHISFDTLVLYGALREGSIDERAEADRSSQDGHGHNASGLAR 250

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BLAST of mRNA_L-elsbetiae_contig7077.15882.1 vs. uniprot
Match: D8LNN1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNN1_ECTSI)

HSP 1 Score: 238 bits (606), Expect = 1.060e-72
Identity = 118/201 (58.71%), Postives = 155/201 (77.11%), Query Frame = 1

Query:  217 MVSVCWASSNVEGFIKTVKFIELTAANMLAITNLGICVNLAFIVLSHRTMTRVSSVSSLPLLLLFLALSLVIATLVVPFWDTIVVLGTSFVIIHPDQVKDDFIDVISLFLVEFVVGICMLLIIAWLLWYRMKEVKECWKMHRRIRYYFGLTILGTAVNLGIGICGTMFVAGGQVRPVLIIVSWALRYIHIALDTVVLFGVL 819
            MV VCWA SNV GF+K +KF+EL A+NMLAITNL IC NLA +++SHRT+ RV S SS  L+ L LA+S+ +A    PFW T VV GT F + + DQ   D++ V S F +EF+VGICM +I+AWLL +R+ EVKECWK+H RIRYYFGLT++GT VNL +G+CGT++V GG+ + +LI+++W  R+IHIALDT VL+GVL
Sbjct:    1 MVLVCWAGSNVTGFVKALKFLELVASNMLAITNLAICANLALVIMSHRTLARVKSFSSPSLVFLSLAVSIAVAVAAAPFWQTTVVSGTGFAVRNEDQRSGDWLAV-SRFFLEFLVGICMFVIVAWLLLFRINEVKECWKVHARIRYYFGLTLIGTTVNLALGVCGTIYVVGGREKSLLIVLTWTFRHIHIALDTFVLYGVL 200

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BLAST of mRNA_L-elsbetiae_contig7077.15882.1 vs. uniprot
Match: A0A6H5K8K6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8K6_9PHAE)

HSP 1 Score: 230 bits (586), Expect = 6.450e-70
Identity = 115/213 (53.99%), Postives = 161/213 (75.59%), Query Frame = 1

Query:  202 IVEDMMVSVCWASSNVEGFIKTVKFIELTAANMLAITNLGICVNLAFIVLSHRTMTRVSSVSSLPLLLLFLALSLVIATLVVPFWDTIVVLGTSFVIIHPDQVKDDFIDVISLFLVEFVVGICMLLIIAWLLWYRMKEVKECWKMHRRIRYYFGLTILGTAVNLGIGICGTMFVAGGQVRPVLIIVSWALRYIHIALDTVVLFGVLRERDMDE 840
            + +  M+SVCW    +EGFIK +K++E T++NMLAITNL IC+NLA +V SHRT++RV+SVS+  L+LLFLA+S+V A   VPFW   VV GT+F + + D+ K D+I ++S+ ++EFVVGICM +I++WL+ +RM+ +KECWK+H RIRYYF LT++GTAVNL +GI G  +V        L+ ++WA RY H+ALDT+VL+GVL  R MDE
Sbjct:    3 MTQGTMISVCWVGERLEGFIKALKYLEQTSSNMLAITNLAICINLALVVNSHRTLSRVNSVSTPALVLLFLAISVVAAAASVPFWSITVVSGTAFWVTNADKAKADWI-IVSIIILEFVVGICMFIIVSWLMAFRMRAIKECWKLHARIRYYFVLTVIGTAVNLALGISGFSYVFRANAGEYLLSLTWAFRYAHVALDTIVLYGVLGTRHMDE 214

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BLAST of mRNA_L-elsbetiae_contig7077.15882.1 vs. uniprot
Match: D8LNP0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNP0_ECTSI)

HSP 1 Score: 216 bits (550), Expect = 4.330e-65
Identity = 113/211 (53.55%), Postives = 154/211 (72.99%), Query Frame = 1

Query:  217 MVSVCWASSNVEGFIKTVKFIELTAANMLAITNLGICVNLAFIVLSHRTMTRVSSVSSLPLLLLFLALSLVIATLVVPFWDTIVVLGTSFVIIHPDQVKDDFIDVISLFLVEFVVGICMLLIIAWLLWYRMKEVKECWKMHRRIRYYFGLTILGTAVNLGIGICGTMFVAGGQVRPVLIIVSWALRYIHIALDTVVLFGVLRERDMDERSD 849
            M+SVCWA  N+  FIKT+KF+EL A+NMLAITNL ICVNL+ IV+S R  + V S+S+  L+LLFLALS  +A + VPFW   V+ GT F  +  ++   +F+ +IS F+VEF+VGICM +I++WLL +RM E+KECW MH  +RYYFGLT+LGT  NL +G+CGT++V      P+L+I SW  R + IALDT+VL  VL  + +DER++
Sbjct:    1 MISVCWAGENLATFIKTLKFLELFASNMLAITNLAICVNLSLIVMSRRPQSHVKSISTHKLVLLFLALSAGLAAIAVPFWGLTVLSGTGFWELGENKRDHEFV-MISTFMVEFLVGICMFVIVSWLLLFRMTEIKECWMMHACLRYYFGLTLLGTVGNLTLGVCGTIYVISDMAWPLLMIFSWGFRQVRIALDTIVLHSVLATKSVDERAE 210

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BLAST of mRNA_L-elsbetiae_contig7077.15882.1 vs. uniprot
Match: D8LNN2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNN2_ECTSI)

HSP 1 Score: 187 bits (476), Expect = 6.830e-55
Identity = 94/169 (55.62%), Postives = 132/169 (78.11%), Query Frame = 1

Query:  217 MVSVCWASSNVEGFIKTVKFIELTAANMLAITNLGICVNLAFIVLSHRTMTRVSSVSSLPLLLLFLALSLVIATLVVPFWDTIVVLGTSFVIIHPDQVKDDFIDVISLFLVEFVVGICMLLIIAWLLWYRMKEVKECWKMHRRIRYYFGLTILGTAVNLGIGICGTMFV 723
            M+SVCW    +EGFIK +K++E T++NMLAITNL IC+NLA +V SHRT++RV SVS+  L+LLFLA+S++ A   VPFW   VV GT+F + + D+ K D+I ++S+ ++EFVVGICM +I++WL+ +RM+ +KECWK+H RIRYYF LT++ TAVNL +GI G  +V
Sbjct:    1 MISVCWVGERLEGFIKALKYLEQTSSNMLAITNLAICINLALVVNSHRTLSRVKSVSTPALVLLFLAISVIAAAASVPFWSITVVSGTAFWVTNADKAKADWI-IVSIIILEFVVGICMFVIVSWLMAFRMQAIKECWKIHARIRYYFVLTLIATAVNLALGISGLSYV 168

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BLAST of mRNA_L-elsbetiae_contig7077.15882.1 vs. uniprot
Match: A0A6H5KRY2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRY2_9PHAE)

HSP 1 Score: 186 bits (473), Expect = 2.250e-54
Identity = 100/177 (56.50%), Postives = 132/177 (74.58%), Query Frame = 1

Query:  217 MVSVCWASSNVEGFIKTVKFIELTAANMLAITNLGICVNLAFIVLSHRTMTRVSSVSSLPLLLLFLALSLVIATLVVPFWDTIVVLGTSFVIIHPDQVKDDFIDVISLFLVEFVVGICMLLIIAWLLWYRMKEVKECWKMHRRIRYYFGLTILGTAVNLGIGICGTMFVAG-GQVRP 744
            M+SVCWA  N+   IK +KF+EL +ANMLA+TNL ICVNLA +V+SHRT++RVSS+SS  ++ L L L++  A   VP W TI++ GT F     D+   D+  V+S FL EF+VGICM+ I+AWLL +RMKE+KECWK+H RIRYYFGLT++ T VNL +GI GT+++ G GQ RP
Sbjct:    1 MISVCWAGGNLSNLIKFLKFLELASANMLAVTNLAICVNLALVVMSHRTLSRVSSLSSPRVIWLSLVLAVGGAAAAVPSWKTIILTGTYFSPYSEDKQDLDW-SVVSRFLFEFIVGICMIAIVAWLLLFRMKEIKECWKVHTRIRYYFGLTLIATGVNLVLGIFGTVYIVGEGQRRP 176

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BLAST of mRNA_L-elsbetiae_contig7077.15882.1 vs. uniprot
Match: D8LNN7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNN7_ECTSI)

HSP 1 Score: 175 bits (444), Expect = 7.900e-50
Identity = 89/156 (57.05%), Postives = 122/156 (78.21%), Query Frame = 1

Query:  403 LLFLALSLVIATLVVPFWDTIVVLGTSFVIIHPDQVKDDFIDVISLFLVEFVVGICMLLIIAWLLWYRMKEVKECWKMHRRIRYYFGLTILGTAVNLGIGICGTMFVAGGQVRPVLIIVSWALRYIHIALDTVVLFGVLRERDMDERSDRNRSLQE 870
            +L ++ SL +AT  VP W+T VVLGT+F   +PD  K DF+ ++S+++ EF+VGICML+I++WL  +RMKE+KECWK+H RIRYYF LT+LGTAVNLG+GICG  FV G + +P+L I SW  RYI I+ DT+VL+GVLRE  +DER++ +RS Q+
Sbjct:    1 MLLVSASLAVAT--VPLWETTVVLGTAFWFTNPDPAKYDFV-IMSIYIFEFIVGICMLVIVSWLAMFRMKEMKECWKIHPRIRYYFCLTLLGTAVNLGLGICGAAFVKGDRKQPLLQIWSWLFRYIQISFDTLVLYGVLREGSIDERAEEDRSSQD 153

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig7077.15882.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig7077.15882.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 17


Match Name	E-value	Identity	Description
D7FTK5_ECTSI	1.910e-113	62.02	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
D8LNM4_ECTSI	5.120e-84	58.68	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
D7FTK4_ECTSI	3.540e-81	59.19	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5JWL8_9PHAE	4.100e-77	53.91	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D8LNN1_ECTSI	1.060e-72	58.71	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]
A0A6H5K8K6_9PHAE	6.450e-70	53.99	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D8LNP0_ECTSI	4.330e-65	53.55	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]
D8LNN2_ECTSI	6.830e-55	55.62	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5KRY2_9PHAE	2.250e-54	56.50	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D8LNN7_ECTSI	7.900e-50	57.05	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig7077	contig	L-elsbetiae_contig7077:1056..7067 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Properties


Property Name	Value
Hectar predicted targeting category	other localisation
Exons	5
Model size	1157
Cds size	951
Stop	1
Start	1

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig7077.15882.1	prot_L-elsbetiae_contig7077.15882.1	Laminarionema elsbetiae ELsaHSoW15	polypeptide	L-elsbetiae_contig7077 1056..6861 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622816785.2970865-CDS-L-elsbetiae_contig7077:1055..1231	1622816785.2970865-CDS-L-elsbetiae_contig7077:1055..1231	Laminarionema elsbetiae ELsaHSoW15	CDS	L-elsbetiae_contig7077 1056..1231 +
1691683811.561022-CDS-L-elsbetiae_contig7077:1055..1231	1691683811.561022-CDS-L-elsbetiae_contig7077:1055..1231	Laminarionema elsbetiae ELsaHSoW15	CDS	L-elsbetiae_contig7077 1056..1231 +
1622816785.3094742-CDS-L-elsbetiae_contig7077:3782..3957	1622816785.3094742-CDS-L-elsbetiae_contig7077:3782..3957	Laminarionema elsbetiae ELsaHSoW15	CDS	L-elsbetiae_contig7077 3783..3957 +
1691683811.5744455-CDS-L-elsbetiae_contig7077:3782..3957	1691683811.5744455-CDS-L-elsbetiae_contig7077:3782..3957	Laminarionema elsbetiae ELsaHSoW15	CDS	L-elsbetiae_contig7077 3783..3957 +
1622816785.3210082-CDS-L-elsbetiae_contig7077:4743..4899	1622816785.3210082-CDS-L-elsbetiae_contig7077:4743..4899	Laminarionema elsbetiae ELsaHSoW15	CDS	L-elsbetiae_contig7077 4744..4899 +
1691683811.5825999-CDS-L-elsbetiae_contig7077:4743..4899	1691683811.5825999-CDS-L-elsbetiae_contig7077:4743..4899	Laminarionema elsbetiae ELsaHSoW15	CDS	L-elsbetiae_contig7077 4744..4899 +
1622816785.3318326-CDS-L-elsbetiae_contig7077:6034..6267	1622816785.3318326-CDS-L-elsbetiae_contig7077:6034..6267	Laminarionema elsbetiae ELsaHSoW15	CDS	L-elsbetiae_contig7077 6035..6267 +
1691683811.5910594-CDS-L-elsbetiae_contig7077:6034..6267	1691683811.5910594-CDS-L-elsbetiae_contig7077:6034..6267	Laminarionema elsbetiae ELsaHSoW15	CDS	L-elsbetiae_contig7077 6035..6267 +
1622816785.3416083-CDS-L-elsbetiae_contig7077:6650..6861	1622816785.3416083-CDS-L-elsbetiae_contig7077:6650..6861	Laminarionema elsbetiae ELsaHSoW15	CDS	L-elsbetiae_contig7077 6651..6861 +
1691683811.6031454-CDS-L-elsbetiae_contig7077:6650..6861	1691683811.6031454-CDS-L-elsbetiae_contig7077:6650..6861	Laminarionema elsbetiae ELsaHSoW15	CDS	L-elsbetiae_contig7077 6651..6861 +

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622816785.3520613-UTR-L-elsbetiae_contig7077:6861..7067	1622816785.3520613-UTR-L-elsbetiae_contig7077:6861..7067	Laminarionema elsbetiae ELsaHSoW15	UTR	L-elsbetiae_contig7077 6862..7067 +
1691683811.6180623-UTR-L-elsbetiae_contig7077:6861..7067	1691683811.6180623-UTR-L-elsbetiae_contig7077:6861..7067	Laminarionema elsbetiae ELsaHSoW15	UTR	L-elsbetiae_contig7077 6862..7067 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at L-elsbetiae_contig7077:1056..7067+
coding sequence from alignment at L-elsbetiae_contig7077:1056..7067+

protein sequence of mRNA_L-elsbetiae_contig7077.15882.1

>prot_L-elsbetiae_contig7077.15882.1 ID=prot_L-elsbetiae_contig7077.15882.1|Name=mRNA_L-elsbetiae_contig7077.15882.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=317bp
MSFALSCESDYFVAGLIEGENFATPVRVIGTLIAVSVASNWCCRTKIKRL
SLFFSHWLSGLVFGLGFIVEDMMVSVCWASSNVEGFIKTVKFIELTAANM
LAITNLGICVNLAFIVLSHRTMTRVSSVSSLPLLLLFLALSLVIATLVVP
FWDTIVVLGTSFVIIHPDQVKDDFIDVISLFLVEFVVGICMLLIIAWLLW
YRMKEVKECWKMHRRIRYYFGLTILGTAVNLGIGICGTMFVAGGQVRPVL
IIVSWALRYIHIALDTVVLFGVLRERDMDERSDRNRSLQERTTASGISRV
SGVPNIKPVSSSSLIV*

mRNA from alignment at L-elsbetiae_contig7077:1056..7067+

Legend: polypeptideCDSUTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_L-elsbetiae_contig7077.15882.1 ID=mRNA_L-elsbetiae_contig7077.15882.1|Name=mRNA_L-elsbetiae_contig7077.15882.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=6012bp|location=Sequence derived from alignment at L-elsbetiae_contig7077:1056..7067+ (Laminarionema elsbetiae ELsaHSoW15)
ATGTCATTCGCGTTGTCATGTGAATCAGACTATTTTGTTGCTGGACTCAT
CGAGGGGGAAAACTTCGCCACCCCAGTGAGGGTAATCGGAACTCTCATCG
CCGTGAGCGTCGCTTCCAACTGGTGCTGCAGGACGAAGATCAAGAGGCTC
AGCCTCTTCTTTTCCCACTGGCTTAGGTATGGATGCAGGACGTGCGTTGC
CCAGAGAAGGACATTCGCGCTTGTTCTATTATAACTCATTTTTACGGTGG
ATGATATCTATCTAGATATCCACATGTTTATTCAACGGATGTTGATATGT
TTCATTCATGTTTCATTCATCCTGACACTTGAGACGCGAACTGAAAGCCA
TTGTGGTGGTCATATTTCGTCAACAGATCCTCACTCGAAGCCATGAAATA
ATACTTACTTGAAATCATGTAGTAGTGGAAGCCTTCCATTCAGACGTGTG
GCTCAGGGCTCAGTCCATGACAACATCTCAGAGGGTGAAGACAACAAACA
AAGCGTCCGATACTCATGTGTTACAGTCTATGGTATCTAGTCTATGTTTG
ATGCTGTACTGTGCGACATATTGAGAGAGGATATGTGTGTATGTATGCAT
GGGTGACAGAGCAGAGCTGCTTTCACCATCTGCAAAGGCGTCTGTGAAAG
ACCCTTCCGGAAAACGCGGCGACTTAAATTTGAAAAAAGGCTCGCGGGAA
AATAAATGATAAAATGATGATCTATCTGGGGGCAAAAATAAGCCGCAGTC
TACATGGCTCAAAGTTTGCCAGACACGGTTCGTGAGGGCGAAGCTTACGA
ACAGACGAAGCGCCCGGTTCCTAAATGATTTCCTGTGAGACATGAAGAGG
GTGCAGTTGTTGCATATTTTACCAACGGCGATGCTGGGCTCTTCTGTGTC
GCAGGAAGAGTACCAAAAATCACACAACATACATTTAGACTTGTTTGTAA
GGAGTGACGCGTCAGCCCTTACGGTAGCGTTTCGCCAGGAAGGGAATACT
TTGAGGCAGTGAGTGTGATAGCAGTAACTTCCCGTCTTGGACTAAAAGCA
GCTGTGTATCTATCTGTTCTTTAGACGGGCAGCGCACTATGTTAGATACA
TACCTCGTATCTAGAGACATGAAAAAAAAATTAAATTATGTTTGACCTGG
CAGAGTTGTCAGGGAGGTGTTGATCAGGTGTTGATGTCTTTGGAATGTTG
ATCAGGCGTTTTTGTACTCGACTGGACCATAAACAACACCGTCATTTCAT
GGAGTACCGGTTGAACACCACGGAGTCCTGGGCTGAGTTCCATTTTTGAT
TCACTTCTTTTTAACCTGTGATGGGCCCACTCGCGTGGCGCGGTGACTTT
AATTTTGAAAAACAAAGTATTTAAACAACAAGTTAATGTATTTGTATTCT
AGACTATCTAGTCTAGTCTACATCGCTTTTTTTAGTTAGATAATGTATAC
AAAATATCAGCAGTCTAGATACTACGTCCAGTCTGTAAAAAAATCGTTCC
AGAGGGATCTGTTGTAAGTAGGTCAGCTTCCTTTAGGCTCCCTGGGCCAT
AGGTTCCATTCTCGATCACTGAATTTTTATTTCTATGTAACACCTGGGCC
GGGCCATTATTAGTGGACGGCCTATTCGTTTGGATGCCAAACCCGGACGA
GGATCCGAGTAATTTGGGGTAACAAATACACGAGGTACGTTATTTGCTGT
GTTATGTGTCTTACGTGTGGTAGCTGGCTCAACAAGACATGTTTGTTCGT
CATGATGTTGTGTGTCGGGCTGTAACGATTTGAAAGGTCGGCCTGATTCT
TGAATTCGTGCAAGTAAGAGAGTGTGTGACGTCATGCAAAGACAGCACAA
CAGTATCAGTTGTTTTCATGACACCCACGGGCACACAGATACCACATTCA
CCAGACAACAGTTACAAAGCTAGTTTTCCAGAAATGAGAGTCTGCTACAC
AGAGTGGCACTATAATTGATCCGGACCCGGCAGCTGCATCTGTACCTCCT
GCACTGCAGCAGTATAGGGCGCATAGCTAGACGGTAACCAAGCTGGTTCT
CTTGTACTAAAACGTACCATAGTACGTTTAGTTTTCCAAAGCTGGATATC
CCAAAAGCTGTAAGAAAAAATAAAAATAAAAAAGCTGCGTTTCCCTGATG
TTGCTCAACGGCCCGAACATTTGCGTGCGTAGTCGGACGTGGCAACCAGC
AGCCCGGTAGCTGCCCCTGCAGTACGTCACTCCAGTCGAGTTCGAAAGGC
TTGACAGAAAGGACCCCAGGAACTGACAGAAACACTCTTCTTTAGATATT
AGACTAGTCTAGTCTAGACTTACATATTAATTGAAGTTTAGCGCAGCGGT
TTGTTCACTTATTTGACAGAGAAAAGAATGTGCGTGTACACAAACTGCCT
GTCGAGATTGGTGCAGACGATCAACCCAGCTAGAGTTTTCAAGTAACAAA
GAAGAGAGAGTAAAATGATTTCGAGAGCGTTCGACACCACGTGCAATGCT
CTCTTTGTCGCTTTGCTGCACCGACAGAGATGATGGAATAGAGACCACGT
CCCGACTGGTTTGATCTCGATCGATGAACTATGTATCTAGAGTGCGGAGT
CCTCCTATCCCTGCAAAAAGGCTGCCTTTTTGTGCTGTCTGGCCGATCGA
TGTGTCCTGACTTCGTGTGTTACCCTACATCTGCACACAACTTCGTGAAC
CAAAACCAACCTCATTACTCTGTACAGCGGACTGGTCTTTGGGCTCGGCT
TCATTGTGGAGGATATGATGGTTAGCGTATGCTGGGCCTCGAGCAACGTG
GAGGGCTTCATCAAGACTGTCAAGTTCATCGAGCTGACTGCGGCTAACAT
GCTGGCCATCACCAACCTCGGCATCTGCGTCAACCTTGCCTTCATCGTCT
TGGTGAGCAACCAACGAGGCTCGACTTGAAACTCTTCATATGGGATGTGC
GATGTACGTCACCAAGATGCACATTTTCATTGCTAAAAAGAAAAAAAAAA
GCATTCGTACATACCGTTGTTCCAGGTAGTGAAAACATTCGTTTCAGCGG
GAAGATGCATTTAAAAAAGGGCTTGTTTACAATTTTGGCTCTTGGGCTTG
TGCGACCGCATGACGCATCTCGGTCGAGTCGAAACATGTGCACAACCGTT
GGCTTTGACCAAGGCACTCTCCGCGTGTCGGTGCGCTTCTGCGTGACATT
CTATGACAAAATATTTTTTCTTTTTCCTCCCATTATTGGCATATTTTGTC
ATGACCACCGGCTGGGGCAGCGCTGGTGTGAATTGATGCAGGAAGCTTAC
ATGTTACGTCCTCTTTACCTTGTCAACCTGCGGGCTACATTCTAGAATCT
CCGGCCTGCAGTGGCCGACTGTCGAGCCACTGATCCCTCCACTAGACTCA
GCGGCTTTCTGGTTTGCATTCAATGGATGACGAGTTGGTCCGCTTTAGAG
CTCTTATCTCGCCTATTTCGTTTCTACGAGGCGCGATATTTGTGGTCGGG
AGTTGGCGAAGGTATGACACATAGACTACATTCGAGACATTTCCGAGAGT
CGGCCAGCGTGTCTGTTTGTATCAACCTCCGGAGCTGTTGTTTTATATTT
TTCCTGGTGATGACGTTTCGTTATTCCTCGCCTTTCTCTTCATGTGGGCT
CTCTTCTTCCTGATTGGATGCATCATCGTTATTCGCAGTCTCACCGAACA
ATGACACGCGTGTCAAGCGTCAGCTCCCTTCCGCTGCTCCTGCTCTTCCT
GGCCCTCTCCCTGGTGATCGCGACTCTGGTGGTTCCTTTTTGGGACACCA
TTGTTGTCCTCGGAACCAGCTTTGTTATCATCCACCCTGATCAGGTAAAA
CTCTTGTGCATATCGTTAATAACAATGTATGTACAGTTCTAGGGCCGATT
GATTTTCATTCGAGGAAAAATCAATGATTTTAGCGCGAAGGAAGTTGGTT
TCATTCTAAATTTATCGGAAGCAGCTCTGCGTTTTGCGCCTGGGGAAATA
TAAAACATTCACCGACGGCTTCCATTTTGCATAGGCTAGGCGATTGTTCG
AATGCAGTTGCTCGGTGGATAGTAGTTGCTTCAAAATCAGCGAGCACTGT
GTAGCTATGTACACGCCTGAACATATCGTGCACGGTGTCGACTTGGGAGC
ACGACCTCCAGTAGCGTCAATTTTACATGTTGATATCAAATTTTTATTTT
TAAGTGTATGCACCGTATCATTGAATTTGTATATAGTCCATACACCCGAA
GTTGAAAGGGTACCTCTCATACCAGGTGCATTTACCGCCGCTTGTGCATA
TATTTCGTGCCACGTGCACAGCCGCGAAGAGACTAGCTTTTTTCTCGTTC
ACCGTGATCAGGAACGAACGTAGATGCGGATGGTAGATCATTCTCGAGCT
AGCTGTTGTACGGCGGTCGGTACATGTGTCTTGCATCATCTCGTGAGTGG
TGACGTCGTATTCAAAACCAGCGACCAAAATGGACCACGGCGATTGCAAG
CATCTGCTGAAGTTGAGTGCGGTTCTGTACGTTGGCACTACTGTGGTGCC
AGATAAATAAGGTGGTGAGTTGATGGGCGCAGGCGGCGTTTGGTGTTTGG
ACCCACATAGTGTCGTGAGCACGCACTGACCGCTTGGGTCACTCTACCTG
CAATGACTGGATCAGTTCCGTGTGTGGAACGTGAGAGGCGTGGCACGGCA
TGCCGATTATCGGAACAAGAGATATTTAACGCTCCCAAGGCACCGCCCAA
AACTCAAACTTCATAACTGATGCTGCAGCTGGCGAAGCCGTGAAGAGATC
CGCCGATTGAACCCCGTAATACACATGCATGCGGCTTCCCATTCATCCAA
TCGCTGCGCACAACACCGCTTAACGTTTCTCCTGACTCCTGCGCTTTCGT
GGTGTTTCCGTGCCGCCCGACGCCTCCGTGTGATGCGTGGACGCATTTTA
CGACGCCAATCCCGAACGTCTGTGCGCAGGTCAAAGACGATTTCATCGAC
GTTATTTCCTTGTTCCTTGTCGAGTTCGTGGTCGGGATCTGCATGCTCCT
CATCATAGCCTGGCTTCTGTGGTACCGGATGAAGGAGGTGAAGGAGTGCT
GGAAGATGCACCGCCGCATCCGCTACTATTTCGGTCTCACTATCCTTGGC
ACGGCTGTAAACCTGGGTATCGGCATTTGCGGCACGATGTTTGTCGCCGG
AGGGCAAGTTCGGTGAGTGCGGTACGGTGCAGGTTTGATCAAATTGAGGG
GGGGTGTTTGCGACCCAAAGGGAAGAGACGACAGGAAAGTCAAAACTTTA
TATACCTGTTTTTTCTGCCGGGAGTCGATTCGTTGCGCCTCTACGGCCCG
GGGTGCTGTAACCGGACTGTACGGCTGTACTGTACTGCACTGCGGTAGTT
TTGAACCTGATGTGGTGAGAAAGCATATGTATGTGTAGTAACGATAGGAC
TGGATGATGCCTCTTTTTGAAGTATGGACGTCTCTCTGTCTCCCTGTCTC
GAAAGGAATGAATGCACCAAGCAGGTGAAGTAACGAACCTTTGTACCCCT
TCCCGTGCGTGCGCCGACCCTCTTGAAACCCATGATGGCTGCTAGCCCCG
TCCTCATTATCGTGAGCTGGGCCTTGAGGTACATCCACATTGCCCTGGAC
ACCGTTGTGTTGTTCGGCGTGCTTCGAGAGAGGGACATGGACGAACGCAG
CGACCGCAACCGATCTCTTCAGGAGAGGACGACTGCATCAGGAATATCGA
GAGTATCAGGAGTGCCCAACATCAAGCCCGTCTCAAGTTCCTCCCTCATC
GTCTGATCGCATCGACTGGGTGGCATTCGAGACCATGCATCACACTTCGA
TGCCTCCATCCATTCGACTTTTGTACCACCAACGACGTACTGTATCAGGT
TGTTTCTTGTGACTTGCAGCTTTGGTATGAGGTTTAACGGCCAATCGCTC
GCGGTGTGTAGTAGTCGTGCACAATGTAACGTTTCTTGAACACACTACAA
TGTTGTTGTAGC

Coding sequence (CDS) from alignment at L-elsbetiae_contig7077:1056..7067+

>mRNA_L-elsbetiae_contig7077.15882.1 ID=mRNA_L-elsbetiae_contig7077.15882.1|Name=mRNA_L-elsbetiae_contig7077.15882.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1902bp|location=Sequence derived from alignment at L-elsbetiae_contig7077:1056..7067+ (Laminarionema elsbetiae ELsaHSoW15)
ATGTCATTCGCGTTGTCATGTGAATCAGACTATTTTGTTGCTGGACTCAT
CGAGGGGGAAAACTTCGCCACCCCAGTGAGGGTAATCGGAACTCTCATCG
CCGTGAGCGTCGCTTCCAACTGGTGCTGCAGGACGAAGATCAAGAGGCTC
AGCCTCTTCTTTTCCCACTGGCTTAGATGTCATTCGCGTTGTCATGTGAA
TCAGACTATTTTGTTGCTGGACTCATCGAGGGGGAAAACTTCGCCACCCC
AGTGAGGGTAATCGGAACTCTCATCGCCGTGAGCGTCGCTTCCAACTGGT
GCTGCAGGACGAAGATCAAGAGGCTCAGCCTCTTCTTTTCCCACTGGCTT
AGCGGACTGGTCTTTGGGCTCGGCTTCATTGTGGAGGATATGATGGTTAG
CGTATGCTGGGCCTCGAGCAACGTGGAGGGCTTCATCAAGACTGTCAAGT
TCATCGAGCTGACTGCGGCTAACATGCTGGCCATCACCAACCTCGGCATC
TGCGTCAACCTTGCCTTCATCGTCTTGCGGACTGGTCTTTGGGCTCGGCT
TCATTGTGGAGGATATGATGGTTAGCGTATGCTGGGCCTCGAGCAACGTG
GAGGGCTTCATCAAGACTGTCAAGTTCATCGAGCTGACTGCGGCTAACAT
GCTGGCCATCACCAACCTCGGCATCTGCGTCAACCTTGCCTTCATCGTCT
TGTCTCACCGAACAATGACACGCGTGTCAAGCGTCAGCTCCCTTCCGCTG
CTCCTGCTCTTCCTGGCCCTCTCCCTGGTGATCGCGACTCTGGTGGTTCC
TTTTTGGGACACCATTGTTGTCCTCGGAACCAGCTTTGTTATCATCCACC
CTGATCAGTCTCACCGAACAATGACACGCGTGTCAAGCGTCAGCTCCCTT
CCGCTGCTCCTGCTCTTCCTGGCCCTCTCCCTGGTGATCGCGACTCTGGT
GGTTCCTTTTTGGGACACCATTGTTGTCCTCGGAACCAGCTTTGTTATCA
TCCACCCTGATCAGGTCAAAGACGATTTCATCGACGTTATTTCCTTGTTC
CTTGTCGAGTTCGTGGTCGGGATCTGCATGCTCCTCATCATAGCCTGGCT
TCTGTGGTACCGGATGAAGGAGGTGAAGGAGTGCTGGAAGATGCACCGCC
GCATCCGCTACTATTTCGGTCTCACTATCCTTGGCACGGCTGTAAACCTG
GGTATCGGCATTTGCGGCACGATGTTTGTCGCCGGAGGGCAAGTTCGGTC
AAAGACGATTTCATCGACGTTATTTCCTTGTTCCTTGTCGAGTTCGTGGT
CGGGATCTGCATGCTCCTCATCATAGCCTGGCTTCTGTGGTACCGGATGA
AGGAGGTGAAGGAGTGCTGGAAGATGCACCGCCGCATCCGCTACTATTTC
GGTCTCACTATCCTTGGCACGGCTGTAAACCTGGGTATCGGCATTTGCGG
CACGATGTTTGTCGCCGGAGGGCAAGTTCGCCCCGTCCTCATTATCGTGA
GCTGGGCCTTGAGGTACATCCACATTGCCCTGGACACCGTTGTGTTGTTC
GGCGTGCTTCGAGAGAGGGACATGGACGAACGCAGCGACCGCAACCGATC
TCTTCAGGAGAGGACGACTGCATCAGGAATATCGAGAGTATCAGGAGTGC
CCAACATCAAGCCCGTCTCAAGTTCCTCCCTCATCGTCTGACCCCGTCCT
CATTATCGTGAGCTGGGCCTTGAGGTACATCCACATTGCCCTGGACACCG
TTGTGTTGTTCGGCGTGCTTCGAGAGAGGGACATGGACGAACGCAGCGAC
CGCAACCGATCTCTTCAGGAGAGGACGACTGCATCAGGAATATCGAGAGT
ATCAGGAGTGCCCAACATCAAGCCCGTCTCAAGTTCCTCCCTCATCGTCT
GA