prot_L-elsbetiae_contig7061.15866.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig7061.15866.1
Unique Nameprot_L-elsbetiae_contig7061.15866.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length276
Homology
BLAST of mRNA_L-elsbetiae_contig7061.15866.1 vs. uniprot
Match: D8LHG5_ECTSI (DNA primase large subunit n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHG5_ECTSI)

HSP 1 Score: 517 bits (1331), Expect = 5.560e-181
Identity = 246/273 (90.11%), Postives = 257/273 (94.14%), Query Frame = 0
Query:    1 QQQVYLEGGFAYVPVQRVVTIVVARYRMGISRSLMEASNHFAFVASDSRFGPLLQAGWFNMSKQYLGRDFGGADGTDSDKIKPGMLNTLAERSMPLCMKQLHAALNREHKLKHWGRLQYGLFLKGAGLSVDDAMAFWQTMFTKIMGLDQFQKQYAYNVRHMYGKEGKRTNYTPYSCLKIIMGNPPAAGDHHGCPYRHYDEDHLSNLLSQVRVGGPDKDAILRQVKSKNYQLACQRHFEATHKGHGTSSVSSEGVGNHPNAWMHASMEFHKEKV 273
            ++QVYLEGGFAYVPVQRVVTIVVARYRMGIS+SLMEASNHFA+V SDSRFGPLLQ    NMSKQYLGRDFG  DGTD D IKPGMLN+LAERSMPLCMKQLH+ALNREHKLKHWGRLQYGLFLKGAGLSVDDAMAFWQ MFTKIMGLDQFQKQYAYNVRHMYGKEGKRTNYTPYSCLKIIMGNPPAAGDHHGCPYRHYDEDHLS+LLSQVR+G  DKDAILRQVKSKNYQLACQRHFEATHKG+  S VS++GVGNHPNAWMHASMEFHKEK 
Sbjct:  196 KRQVYLEGGFAYVPVQRVVTIVVARYRMGISKSLMEASNHFAYVTSDSRFGPLLQ----NMSKQYLGRDFGNGDGTDPDNIKPGMLNSLAERSMPLCMKQLHSALNREHKLKHWGRLQYGLFLKGAGLSVDDAMAFWQAMFTKIMGLDQFQKQYAYNVRHMYGKEGKRTNYTPYSCLKIIMGNPPAAGDHHGCPYRHYDEDHLSSLLSQVRIGATDKDAILRQVKSKNYQLACQRHFEATHKGYEASGVSTDGVGNHPNAWMHASMEFHKEKA 464          
BLAST of mRNA_L-elsbetiae_contig7061.15866.1 vs. uniprot
Match: A0A835YS26_9STRA (DNA primase large subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YS26_9STRA)

HSP 1 Score: 384 bits (986), Expect = 6.200e-129
Identity = 183/274 (66.79%), Postives = 215/274 (78.47%), Query Frame = 0
Query:    1 QQQVYLEGGFAYVPVQRVVTIVVARYRMGISRSLMEASNHFAFVASDSRFGPLLQAGWFNMSKQYLGRDFGGADGTDSDKIKPGMLNTLAERSMPLCMKQLHAALNREHKLKHWGRLQYGLFLKGAGLSVDDAMAFWQTMFTKIMGLDQFQKQYAYNVRHMYGKEGKRTNYTPYSCLKIIMGNPPAAGDHHGCPYRHYDEDHLSNLLSQVRVGGPDKDAILRQVKSKNYQLACQRHFEATHKGHGTSSVSSEGVGNHPNAWMHASMEFHKEKVG 274
            Q+ VYLEGG+AYVPVQRVV IVVAR+R  +SRSL EAS  F  V  D RFGPLLQ    NMS+QY+GRDFGG      D I+P  L+ +A RSMPLCM+ LH AL R+HKLKH GRLQYGLFLKGAGLS++DA AFWQ+ FT++M +D F K YAYNVRHMYGKEGKRTNYTPYSCLKIIMG  P AG+HHGCPYRH+DE HLS L  Q+++   D+DA+   VK +NYQLACQRHFEATH+G+  + VS++GVGNHPNAW  ASM++ K K G
Sbjct:  193 QRLVYLEGGYAYVPVQRVVAIVVARFRAALSRSLAEASGAFPAVTGDPRFGPLLQ----NMSRQYVGRDFGGXXXXXXDAIRPEHLDAMAARSMPLCMRGLHLALRRDHKLKHMGRLQYGLFLKGAGLSMEDAAAFWQSEFTRVMSVDAFTKGYAYNVRHMYGKEGKRTNYTPYSCLKIIMGAAPGAGEHHGCPYRHFDESHLSALFGQLKLERADRDAMAAHVKGRNYQLACQRHFEATHRGYEDAGVSADGVGNHPNAWTAASMQYWKAKEG 462          
BLAST of mRNA_L-elsbetiae_contig7061.15866.1 vs. uniprot
Match: A0A7S3H234_9STRA (DNA primase large subunit n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H234_9STRA)

HSP 1 Score: 327 bits (837), Expect = 2.230e-106
Identity = 155/274 (56.57%), Postives = 193/274 (70.44%), Query Frame = 0
Query:    2 QQVYLEGGFAYVPVQRVVTIVVARYRMGISRSLMEASNHFAFVASDSRFGPLLQAGWFNMSKQYLGRDFGGADGTDSDKIKPGMLNTLAERSMPLCMKQLHAALNREHKLKHWGRLQYGLFLKGAGLSVDDAMAFWQTMFTKIMGLDQFQKQYAYNVRHMYGKEGKRTNYTPYSCLKIIMGNPPAAGDHHGCPYRHYDEDHLSNLLSQVRVGGPDKDAILRQVKSKNYQLACQRHFEATHKGH-GTSSVSSEGVGNHPNAWMHASMEFHKEKVG 274
            + VYLE GFAYVP+QR+V+I+V R+RM +SR+L EA+N F  V SD R GPLL+    NM+KQ++G DF   +    DK+ P  +   AE +MPLCMK LH+ L REHKLKHWGRLQYGLFLKGAGL ++ A  FW++ FTK++  DQF K YAY+ RHMYGKEG R NYTPYSC+KIIMG PP  G  HGCPYRH  ++ LS+LLS +++  PD   I    KS NYQ+ACQRHF+ TH GH     + S+ V NHPN W   S+ +HK K G
Sbjct:  195 RSVYLEKGFAYVPLQRLVSIIVTRFRMQLSRALAEAANSFDIVGSDHRIGPLLK----NMNKQFIGNDFTKTN-QSIDKLSPDKIELAAEVNMPLCMKNLHSNLKREHKLKHWGRLQYGLFLKGAGLDLEGAQQFWESHFTKLISHDQFVKSYAYSFRHMYGKEGARKNYTPYSCMKIIMGTPPETGAFHGCPYRHMPDNQLSSLLSSLKLSTPDVSEIAALAKSSNYQIACQRHFDVTHPGHLNNPELKSDAVANHPNLWFQTSVNYHKLKNG 463          
BLAST of mRNA_L-elsbetiae_contig7061.15866.1 vs. uniprot
Match: W7TRK8_9STRA (DNA primase large subunit n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TRK8_9STRA)

HSP 1 Score: 321 bits (823), Expect = 3.740e-104
Identity = 153/273 (56.04%), Postives = 200/273 (73.26%), Query Frame = 0
Query:    2 QQVYLEGGFAYVPVQRVVTIVVARYRMGISRSLMEASNHFAFVASDSRFGPLLQAGWFNMSKQYLGRDFGGADGTDSDKIKPGMLNTLAERSMPLCMKQLHAALNREHKLKHWGRLQYGLFLKGAGLSVDDAMAFWQTMFTKIMGLDQFQKQYAYNVRHMYGKEGKRTNYTPYSCLKIIMGNPPAAGDHHGCPYRHYDEDHLSNLLSQVRVGGPDKDAILRQVKSKNYQLACQRHFEATHKGHGTSSVSSEGVGNHPNAWMHASMEFHKEKVG 274
            +QV+LEGGFAYVPV+R+V+I+VAR+R  +SR L+EA     +V +D R  PL+     NM+KQY G+DF G    DS  +    L+ LA+RSMP+CM+ LH  L  EHKLKHWGRLQYGLFLKGAG+ ++DA+ FW+  FTKIM  D F KQYAY++RH +GKEGKR +YTP++C KII+G  P  G+ HGCP+RHYDE +L+ LL +  VG  D+D +++  K ++YQLAC +HFE THKG   S +S +GVGNHPNA+  ASM F+KEK G
Sbjct:  201 RQVFLEGGFAYVPVERLVSIIVARFRSSLSRGLLEAFGAMPYVLTDGRIAPLVS----NMAKQYTGKDFSGTKTGDSLDLND--LDMLADRSMPMCMRVLHKNLRLEHKLKHWGRLQYGLFLKGAGIGMEDAIQFWEKEFTKIMTTDVFNKQYAYSIRHYFGKEGKRKDYTPFNCSKIILGPGPGHGEFHGCPFRHYDEANLNKLLERAGVGAMDRDEMIKLSKGQHYQLACMKHFETTHKG-AESLISMDGVGNHPNAFFAASMAFYKEKNG 466          
BLAST of mRNA_L-elsbetiae_contig7061.15866.1 vs. uniprot
Match: F0YER9_AURAN (DNA primase large subunit n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YER9_AURAN)

HSP 1 Score: 308 bits (788), Expect = 2.920e-99
Identity = 148/273 (54.21%), Postives = 190/273 (69.60%), Query Frame = 0
Query:    1 QQQVYLEGGFAYVPVQRVVTIVVARYRMGISRSLMEASNHFAFVASDSRFGPLLQAGWFNMSKQYL--GRDFGGADGTDSDKIKPGMLNTLAERSMPLCMKQLHAALNREHKLKHWGRLQYGLFLKGAGLSVDDAMAFWQTMFTKIMGLDQFQKQYAYNVRHMYGKEGKRTNYTPYSCLKIIMGNPPAAGDHHGCPYRHYDEDHLSNLLSQVRVGGPDKDAILRQVKSKNYQLACQRHFEATHKGHGTSSVSSEGVGNHPNAWMHASMEFHKE 271
            +++VYLE G+AYVP  ++  IVVAR+R  +SRSL +AS+  A  A D R  PLL     N+ K  L  G+D    +  D + I P  ++ LA++SMPLCM+QLH AL R+HKLKHWGR QYGLFLK AGLS++D + F+Q  FTKIM +D F K+YAYN+RH YGKEGKRT Y+PY C K+IM   P  G++HGCPY+HYD+DHL+++L  + +      AIL Q KSKNYQLACQ+HFE TH      +   +GVGNHPNAW  AS  +HKE
Sbjct:  190 RREVYLEKGYAYVPAAKLHAIVVARFRSALSRSLAKASSSLAAAAGDPRLSPLLN----NIEKHDLSNGKDL---EDDDVEGIHPEQIDALAKQSMPLCMQQLHGALKRDHKLKHWGRQQYGLFLKAAGLSMEDQLRFFQAEFTKIMTVDAFSKEYAYNIRHRYGKEGKRTEYSPYGCYKLIMDMAPGPGEYHGCPYKHYDDDHLASILGAMDISRESSQAILGQAKSKNYQLACQKHFEVTHPKAAGVAARPDGVGNHPNAWFKASRIYHKE 455          
BLAST of mRNA_L-elsbetiae_contig7061.15866.1 vs. uniprot
Match: A0A7S1ZF14_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZF14_9STRA)

HSP 1 Score: 302 bits (774), Expect = 7.420e-97
Identity = 144/272 (52.94%), Postives = 200/272 (73.53%), Query Frame = 0
Query:    5 YLEGGFAYVPVQRVVTIVVARYRMGISRSLMEASNHFAFVASDS-RFGPLLQAGWFNMSKQYLGRDFGGADGT-DSDKIKPGMLNTLAERSMPLCMKQLHAALNREHKLKHWGRLQYGLFLKGAGLSVDDAMAFWQTMFTKIMGLDQFQKQYAYNVRHMYGKEGKRTNYTPYSCLKIIMGNPPAAGDHHGCPYRHYDEDHLSNLLSQVRVGGP-DKDAILRQVKSKNYQLACQRHFEATHKGHGT-SSVSSEGVGNHPNAWMHASMEFHKEK 272
            Y+  G AYVP  R+V+I+VA+YRM +S+SL+ A+  F  V  ++ R  PLL++    M+ QYLGRD+G  D   ++D++    +++ A++SMPLCM QLHA + R+ KLKH GRLQYGLFLKG G+S ++ +AF+Q +FTKIM  +QF K Y+YN+RHM+G+EGKR +Y+PYSC+KII+GNPP  G+ HGCP+RHYD+  LS+LL+++ VG   D+ AIL Q K++NYQLAC +HFE  H G  +   +S  GVGNHPNAW  AS+ +HK K
Sbjct:  226 YVHDGMAYVPQSRMVSIIVAKYRMALSKSLVRAALSFGEVTEENERIAPLLKS----MNSQYLGRDYGKEDTPLENDELTANTVDSYAKQSMPLCMSQLHAGMKRDSKLKHQGRLQYGLFLKGGGMSTEEHLAFFQRVFTKIMTTEQFNKNYSYNIRHMHGQEGKRASYSPYSCMKIILGNPPQGGESHGCPFRHYDDSSLSSLLTKLNVGSASDRSAILAQKKARNYQLACAKHFEVMHPGAASVEGLSMNGVGNHPNAWFAASVGYHKAK 493          
BLAST of mRNA_L-elsbetiae_contig7061.15866.1 vs. uniprot
Match: A0A7S4A6J1_9STRA (DNA primase large subunit n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A6J1_9STRA)

HSP 1 Score: 297 bits (761), Expect = 4.500e-95
Identity = 144/275 (52.36%), Postives = 193/275 (70.18%), Query Frame = 0
Query:    1 QQQVYLEGGFAYVPVQRVVTIVVARYRMGISRSLMEASNHFAFVASDSRFGPLLQAGWFNMSKQYLGRDFGGADGTDSDKIKPGMLNTLAERSMPLCMKQLHAALNREHKLKHWGRLQYGLFLKGAGLSVDDAMAFWQTMFTKIMGLDQFQKQYAYNVRHMYGKEGKRTNYTPYSCLKIIMGNPPAAGDHHGCPYRHYDEDHLSNLLSQVRVGGPDKDAILRQVKSKNYQLACQRHFEATHKG---HGTSSVSS-EGVGNHPNAWMHASMEFHKE 271
            +++VYLE G+AYVP  ++ +IVV+R+R  +SRSL +AS   A  A+D R GPLL     N+ K  L R     D  D + I P  ++ LA++SMPLCM+QLH AL R+HKLKHWGR QYGLFLK AGLS++D + F+Q  FTKIM  DQF K+YAYN+RH YGKEGKRT Y+PY C K++M   P  G++HGCPYRH+D DHL+ +LS+  +   ++  +L + K +NYQ+ACQRHFE  HK    +G   V++ +GVGNHPNAW  AS  +H++
Sbjct:  190 RREVYLEKGYAYVPQAKLHSIVVSRFRASLSRSLAKASGSLAAAAADPRLGPLLT----NVEKHDLERQ--DVDDDDIEGITPEQIDALADQSMPLCMQQLHYALKRDHKLKHWGRQQYGLFLKAAGLSMEDQLRFFQAEFTKIMTHDQFSKEYAYNIRHRYGKEGKRTEYSPYGCYKLVMDMAPGPGEYHGCPYRHFDADHLAAVLSKTSLDAGEQSLVLGKAKERNYQIACQRHFEFAHKKQTVNGKKVVANLDGVGNHPNAWFKASRVYHQD 458          
BLAST of mRNA_L-elsbetiae_contig7061.15866.1 vs. uniprot
Match: A0A7S2UM83_9STRA (DNA primase large subunit n=2 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UM83_9STRA)

HSP 1 Score: 288 bits (738), Expect = 1.650e-91
Identity = 137/277 (49.46%), Postives = 195/277 (70.40%), Query Frame = 0
Query:    1 QQQVYLEGGFAYVPVQRVVTIVVARYRMGISRSLMEASNHFAFVASDS-RFGPLLQAGWFNMSKQYLGRD--FGGADGTDSDKIKPGMLNTLAERSMPLCMKQLHAALNREHKLKHWGRLQYGLFLKGAGLSVDDAMAFWQTMFTKIMGLDQFQKQYAYNVRHMYGKEGKRTNYTPYSCLKIIMGNPPAAGDHHGCPYRHYDEDHLSNLLSQVRVGGP-DKDAILRQVKSKNYQLACQRHFEATHKGH-GTSSVSSEGVGNHPNAWMHASMEFHKEK 272
            ++Q Y+E G AYVP+ ++V+IV  ++   +S+SL  A   F+ V +++ R  PLL++    M  QY  ++    G   +D  ++    ++T A +SMPLCM QLH+ L ++HKLKHWGRLQYGLFLKGAG+++++++ F+Q  F KI+  +QF K Y+YN+RHMYGKEGKR +YTPY+C KII+GNPP +GDHHGCPYRHYD+ HLS+LL+++ +G P D+DAI+   K++N QLAC RHFEA H        V+ + VGNHPNAW   S+ +H  K
Sbjct:  209 KRQCYVEAGLAYVPLPKIVSIVTNKFTTALSKSLTNAGYAFSKVTNENGRINPLLKS----MHSQYADKNRYTTGEGMSDGQELTSQNVDTYAAQSMPLCMSQLHSGLQQDHKLKHWGRLQYGLFLKGAGMTMEESLMFFQREFGKIITAEQFNKNYSYNIRHMYGKEGKRASYTPYNCTKIILGNPPQSGDHHGCPYRHYDDTHLSSLLTKMNIGTPADRDAIMSHKKAQNPQLACVRHFEAVHPAATSVKGVTLDNVGNHPNAWFAGSVSYHAAK 481          
BLAST of mRNA_L-elsbetiae_contig7061.15866.1 vs. uniprot
Match: K0RJG2_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RJG2_THAOC)

HSP 1 Score: 285 bits (729), Expect = 3.880e-91
Identity = 141/281 (50.18%), Postives = 204/281 (72.60%), Query Frame = 0
Query:    1 QQQVYLEGGFAYVPVQRVVTIVVARYRMGISRSLMEASNHFAFVASD--SRFGPLLQAGWFNMSKQYLGRDFGGAD-GTDSDKI-KPGMLNTLAERSMPLCMKQLHAALNREHKLKHWGRLQYGLFLKGAGLSVDDAMAFWQTMFTKIMGLDQFQKQYAYNVRHMYGKEGKRTNYTPYSCLKIIMGNPPAAG-DHHGCPYRHYDEDHLSNLLSQVRVG-GPDKDAILRQVKSKNYQLACQRHFEATHKGHGT-SSVSSEGVGNHPNAWMHASMEFHKEKVG 274
            +++ Y+E GFA+VP+ R+V+IVVA++R+ +S+S+  A   F  VA +  +R GPLL++    M+ QY G     A  G D +++     ++ LA +SMPLCM+QLH  L R+HKLKH GRLQ+GLFLKG+G+S+++   F+Q  FT+IM  +QF KQY+Y++RHM+GKEGKR +YTPY+C+KIIMGNPP +G +HHGCPY+HYD+ +LS LL ++++G   D+DAI+R  K  N+QLAC + FE  H    T + V+ +GVGNHPNAW +AS+ +H+ K G
Sbjct:  133 RRECYVEDGFAFVPLTRIVSIVVAKFRVSLSKSMALAVGAFGQVAHEESTRIGPLLKS----MNSQYTGPSTPDAMVGLDGERVLTAATVDGLAAQSMPLCMQQLHTGLKRDHKLKHQGRLQFGLFLKGSGMSLEEHTLFFQREFTRIMTSEQFNKQYSYSIRHMHGKEGKRASYTPYNCMKIIMGNPPQSGVEHHGCPYKHYDDQNLSALLGKLKIGDSADRDAIMRLKKEGNFQLACAKQFEVQHPLASTVAGVNMDGVGNHPNAWFNASVSYHQAKSG 409          
BLAST of mRNA_L-elsbetiae_contig7061.15866.1 vs. uniprot
Match: B8CCN9_THAPS (DNA primase (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CCN9_THAPS)

HSP 1 Score: 282 bits (722), Expect = 6.260e-90
Identity = 140/272 (51.47%), Postives = 191/272 (70.22%), Query Frame = 0
Query:    1 QQQVYLEGGFAYVPVQRVVTIVVARYRMGISRSLMEASNHFAFVASD--SRFGPLLQAGWFNMSKQYLGRDFGGA--DGTDSDKIKPGMLNTLAERSMPLCMKQLHAALNREHKLKHWGRLQYGLFLKGAGLSVDDAMAFWQTMFTKIMGLDQFQKQYAYNVRHMYGKEGKRTNYTPYSCLKIIMGNPPAAG-DHHGCPYRHYDEDHLSNLLSQVRVGG-PDKDAILRQVKSKNYQLACQRHFEATHKGH-GTSSVSSEGVGNHPNAWMHAS 265
            +++ ++E GFAYVP+ R+V+IV A++R  +S+SL  A+  F  VA+D  SR GPLL++    M+ QY G     A  D +  + +    ++ LA +SMPLCM+QLH  L R+HKLKH GRLQYGLFLKGAG+ +++ M F+Q  FTKIM  +QF K YAYN+RH +GKEGKR  YTPY+C+KII GNPP  G +HHGCPY+HYD+ +LS LL+++++GG  D+DAI+   K  N+QLAC +HFE  H        ++ +GVGNHPNAW  AS
Sbjct:  169 KRECFVEKGFAYVPLGRIVSIVAAKFRATLSKSLALAAGVFGQVANDESSRIGPLLKS----MNSQYTGPGAPNAVMDASGENALTAATVDALAAQSMPLCMQQLHVGLKRDHKLKHQGRLQYGLFLKGAGMPMEEHMLFFQREFTKIMTSEQFNKNYAYNIRHTHGKEGKRATYTPYNCMKIIFGNPPQTGVEHHGCPYKHYDDQNLSALLTKLKIGGLSDRDAIMAHKKEGNFQLACTKHFEVMHPAATSVEGINLDGVGNHPNAWFSAS 436          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7061.15866.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LHG5_ECTSI5.560e-18190.11DNA primase large subunit n=2 Tax=Ectocarpus TaxID... [more]
A0A835YS26_9STRA6.200e-12966.79DNA primase large subunit n=1 Tax=Tribonema minus ... [more]
A0A7S3H234_9STRA2.230e-10656.57DNA primase large subunit n=2 Tax=Spumella elongat... [more]
W7TRK8_9STRA3.740e-10456.04DNA primase large subunit n=2 Tax=Monodopsidaceae ... [more]
F0YER9_AURAN2.920e-9954.21DNA primase large subunit n=1 Tax=Aureococcus anop... [more]
A0A7S1ZF14_9STRA7.420e-9752.94Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S4A6J1_9STRA4.500e-9552.36DNA primase large subunit n=1 Tax=Pelagomonas calc... [more]
A0A7S2UM83_9STRA1.650e-9149.46DNA primase large subunit n=2 Tax=Attheya septentr... [more]
K0RJG2_THAOC3.880e-9150.18Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
B8CCN9_THAPS6.260e-9051.47DNA primase (Fragment) n=1 Tax=Thalassiosira pseud... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.930.80coord: 1..56
e-value: 1.3E-9
score: 39.8
IPR007238DNA primase large subunit, eukaryotic/archaealPFAMPF04104DNA_primase_lrgcoord: 3..261
e-value: 7.8E-69
score: 232.0
IPR007238DNA primase large subunit, eukaryotic/archaealPANTHERPTHR10537DNA PRIMASE LARGE SUBUNITcoord: 2..272

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7061contigL-elsbetiae_contig7061:116..7064 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7061.15866.1mRNA_L-elsbetiae_contig7061.15866.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig7061 116..7064 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig7061.15866.1 ID=prot_L-elsbetiae_contig7061.15866.1|Name=mRNA_L-elsbetiae_contig7061.15866.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=276bp
QQQVYLEGGFAYVPVQRVVTIVVARYRMGISRSLMEASNHFAFVASDSRF
GPLLQAGWFNMSKQYLGRDFGGADGTDSDKIKPGMLNTLAERSMPLCMKQ
LHAALNREHKLKHWGRLQYGLFLKGAGLSVDDAMAFWQTMFTKIMGLDQF
QKQYAYNVRHMYGKEGKRTNYTPYSCLKIIMGNPPAAGDHHGCPYRHYDE
DHLSNLLSQVRVGGPDKDAILRQVKSKNYQLACQRHFEATHKGHGTSSVS
SEGVGNHPNAWMHASMEFHKEKVGF*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007238DNA_primase_lsu_euk/arc