mRNA_L-elsbetiae_contig7061.15866.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig7061.15866.1 vs. uniprot
Match: D8LHG5_ECTSI (DNA primase large subunit n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHG5_ECTSI) HSP 1 Score: 517 bits (1331), Expect = 5.560e-181 Identity = 246/273 (90.11%), Postives = 257/273 (94.14%), Query Frame = 1 Query: 1 QQQVYLEGGFAYVPVQRVVTIVVARYRMGISRSLMEASNHFAFVASDSRFGPLLQAGWFNMSKQYLGRDFGGADGTDSDKIKPGMLNTLAERSMPLCMKQLHAALNREHKLKHWGRLQYGLFLKGAGLSVDDAMAFWQTMFTKIMGLDQFQKQYAYNVRHMYGKEGKRTNYTPYSCLKIIMGNPPAAGDHHGCPYRHYDEDHLSNLLSQVRVGGPDKDAILRQVKSKNYQLACQRHFEATHKGHGTSSVSSEGVGNHPNAWMHASMEFHKEKV 819 ++QVYLEGGFAYVPVQRVVTIVVARYRMGIS+SLMEASNHFA+V SDSRFGPLLQ NMSKQYLGRDFG DGTD D IKPGMLN+LAERSMPLCMKQLH+ALNREHKLKHWGRLQYGLFLKGAGLSVDDAMAFWQ MFTKIMGLDQFQKQYAYNVRHMYGKEGKRTNYTPYSCLKIIMGNPPAAGDHHGCPYRHYDEDHLS+LLSQVR+G DKDAILRQVKSKNYQLACQRHFEATHKG+ S VS++GVGNHPNAWMHASMEFHKEK Sbjct: 196 KRQVYLEGGFAYVPVQRVVTIVVARYRMGISKSLMEASNHFAYVTSDSRFGPLLQ----NMSKQYLGRDFGNGDGTDPDNIKPGMLNSLAERSMPLCMKQLHSALNREHKLKHWGRLQYGLFLKGAGLSVDDAMAFWQAMFTKIMGLDQFQKQYAYNVRHMYGKEGKRTNYTPYSCLKIIMGNPPAAGDHHGCPYRHYDEDHLSSLLSQVRIGATDKDAILRQVKSKNYQLACQRHFEATHKGYEASGVSTDGVGNHPNAWMHASMEFHKEKA 464
BLAST of mRNA_L-elsbetiae_contig7061.15866.1 vs. uniprot
Match: A0A835YS26_9STRA (DNA primase large subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YS26_9STRA) HSP 1 Score: 384 bits (986), Expect = 6.200e-129 Identity = 183/274 (66.79%), Postives = 215/274 (78.47%), Query Frame = 1 Query: 1 QQQVYLEGGFAYVPVQRVVTIVVARYRMGISRSLMEASNHFAFVASDSRFGPLLQAGWFNMSKQYLGRDFGGADGTDSDKIKPGMLNTLAERSMPLCMKQLHAALNREHKLKHWGRLQYGLFLKGAGLSVDDAMAFWQTMFTKIMGLDQFQKQYAYNVRHMYGKEGKRTNYTPYSCLKIIMGNPPAAGDHHGCPYRHYDEDHLSNLLSQVRVGGPDKDAILRQVKSKNYQLACQRHFEATHKGHGTSSVSSEGVGNHPNAWMHASMEFHKEKVG 822 Q+ VYLEGG+AYVPVQRVV IVVAR+R +SRSL EAS F V D RFGPLLQ NMS+QY+GRDFGG D I+P L+ +A RSMPLCM+ LH AL R+HKLKH GRLQYGLFLKGAGLS++DA AFWQ+ FT++M +D F K YAYNVRHMYGKEGKRTNYTPYSCLKIIMG P AG+HHGCPYRH+DE HLS L Q+++ D+DA+ VK +NYQLACQRHFEATH+G+ + VS++GVGNHPNAW ASM++ K K G Sbjct: 193 QRLVYLEGGYAYVPVQRVVAIVVARFRAALSRSLAEASGAFPAVTGDPRFGPLLQ----NMSRQYVGRDFGGXXXXXXDAIRPEHLDAMAARSMPLCMRGLHLALRRDHKLKHMGRLQYGLFLKGAGLSMEDAAAFWQSEFTRVMSVDAFTKGYAYNVRHMYGKEGKRTNYTPYSCLKIIMGAAPGAGEHHGCPYRHFDESHLSALFGQLKLERADRDAMAAHVKGRNYQLACQRHFEATHRGYEDAGVSADGVGNHPNAWTAASMQYWKAKEG 462
BLAST of mRNA_L-elsbetiae_contig7061.15866.1 vs. uniprot
Match: A0A7S3H234_9STRA (DNA primase large subunit n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H234_9STRA) HSP 1 Score: 327 bits (837), Expect = 2.230e-106 Identity = 155/274 (56.57%), Postives = 193/274 (70.44%), Query Frame = 1 Query: 4 QQVYLEGGFAYVPVQRVVTIVVARYRMGISRSLMEASNHFAFVASDSRFGPLLQAGWFNMSKQYLGRDFGGADGTDSDKIKPGMLNTLAERSMPLCMKQLHAALNREHKLKHWGRLQYGLFLKGAGLSVDDAMAFWQTMFTKIMGLDQFQKQYAYNVRHMYGKEGKRTNYTPYSCLKIIMGNPPAAGDHHGCPYRHYDEDHLSNLLSQVRVGGPDKDAILRQVKSKNYQLACQRHFEATHKGH-GTSSVSSEGVGNHPNAWMHASMEFHKEKVG 822 + VYLE GFAYVP+QR+V+I+V R+RM +SR+L EA+N F V SD R GPLL+ NM+KQ++G DF + DK+ P + AE +MPLCMK LH+ L REHKLKHWGRLQYGLFLKGAGL ++ A FW++ FTK++ DQF K YAY+ RHMYGKEG R NYTPYSC+KIIMG PP G HGCPYRH ++ LS+LLS +++ PD I KS NYQ+ACQRHF+ TH GH + S+ V NHPN W S+ +HK K G Sbjct: 195 RSVYLEKGFAYVPLQRLVSIIVTRFRMQLSRALAEAANSFDIVGSDHRIGPLLK----NMNKQFIGNDFTKTN-QSIDKLSPDKIELAAEVNMPLCMKNLHSNLKREHKLKHWGRLQYGLFLKGAGLDLEGAQQFWESHFTKLISHDQFVKSYAYSFRHMYGKEGARKNYTPYSCMKIIMGTPPETGAFHGCPYRHMPDNQLSSLLSSLKLSTPDVSEIAALAKSSNYQIACQRHFDVTHPGHLNNPELKSDAVANHPNLWFQTSVNYHKLKNG 463
BLAST of mRNA_L-elsbetiae_contig7061.15866.1 vs. uniprot
Match: W7TRK8_9STRA (DNA primase large subunit n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TRK8_9STRA) HSP 1 Score: 321 bits (823), Expect = 3.740e-104 Identity = 153/273 (56.04%), Postives = 200/273 (73.26%), Query Frame = 1 Query: 4 QQVYLEGGFAYVPVQRVVTIVVARYRMGISRSLMEASNHFAFVASDSRFGPLLQAGWFNMSKQYLGRDFGGADGTDSDKIKPGMLNTLAERSMPLCMKQLHAALNREHKLKHWGRLQYGLFLKGAGLSVDDAMAFWQTMFTKIMGLDQFQKQYAYNVRHMYGKEGKRTNYTPYSCLKIIMGNPPAAGDHHGCPYRHYDEDHLSNLLSQVRVGGPDKDAILRQVKSKNYQLACQRHFEATHKGHGTSSVSSEGVGNHPNAWMHASMEFHKEKVG 822 +QV+LEGGFAYVPV+R+V+I+VAR+R +SR L+EA +V +D R PL+ NM+KQY G+DF G DS + L+ LA+RSMP+CM+ LH L EHKLKHWGRLQYGLFLKGAG+ ++DA+ FW+ FTKIM D F KQYAY++RH +GKEGKR +YTP++C KII+G P G+ HGCP+RHYDE +L+ LL + VG D+D +++ K ++YQLAC +HFE THKG S +S +GVGNHPNA+ ASM F+KEK G Sbjct: 201 RQVFLEGGFAYVPVERLVSIIVARFRSSLSRGLLEAFGAMPYVLTDGRIAPLVS----NMAKQYTGKDFSGTKTGDSLDLND--LDMLADRSMPMCMRVLHKNLRLEHKLKHWGRLQYGLFLKGAGIGMEDAIQFWEKEFTKIMTTDVFNKQYAYSIRHYFGKEGKRKDYTPFNCSKIILGPGPGHGEFHGCPFRHYDEANLNKLLERAGVGAMDRDEMIKLSKGQHYQLACMKHFETTHKG-AESLISMDGVGNHPNAFFAASMAFYKEKNG 466
BLAST of mRNA_L-elsbetiae_contig7061.15866.1 vs. uniprot
Match: F0YER9_AURAN (DNA primase large subunit n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YER9_AURAN) HSP 1 Score: 308 bits (788), Expect = 2.920e-99 Identity = 148/273 (54.21%), Postives = 190/273 (69.60%), Query Frame = 1 Query: 1 QQQVYLEGGFAYVPVQRVVTIVVARYRMGISRSLMEASNHFAFVASDSRFGPLLQAGWFNMSKQYL--GRDFGGADGTDSDKIKPGMLNTLAERSMPLCMKQLHAALNREHKLKHWGRLQYGLFLKGAGLSVDDAMAFWQTMFTKIMGLDQFQKQYAYNVRHMYGKEGKRTNYTPYSCLKIIMGNPPAAGDHHGCPYRHYDEDHLSNLLSQVRVGGPDKDAILRQVKSKNYQLACQRHFEATHKGHGTSSVSSEGVGNHPNAWMHASMEFHKE 813 +++VYLE G+AYVP ++ IVVAR+R +SRSL +AS+ A A D R PLL N+ K L G+D + D + I P ++ LA++SMPLCM+QLH AL R+HKLKHWGR QYGLFLK AGLS++D + F+Q FTKIM +D F K+YAYN+RH YGKEGKRT Y+PY C K+IM P G++HGCPY+HYD+DHL+++L + + AIL Q KSKNYQLACQ+HFE TH + +GVGNHPNAW AS +HKE Sbjct: 190 RREVYLEKGYAYVPAAKLHAIVVARFRSALSRSLAKASSSLAAAAGDPRLSPLLN----NIEKHDLSNGKDL---EDDDVEGIHPEQIDALAKQSMPLCMQQLHGALKRDHKLKHWGRQQYGLFLKAAGLSMEDQLRFFQAEFTKIMTVDAFSKEYAYNIRHRYGKEGKRTEYSPYGCYKLIMDMAPGPGEYHGCPYKHYDDDHLASILGAMDISRESSQAILGQAKSKNYQLACQKHFEVTHPKAAGVAARPDGVGNHPNAWFKASRIYHKE 455
BLAST of mRNA_L-elsbetiae_contig7061.15866.1 vs. uniprot
Match: A0A7S1ZF14_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZF14_9STRA) HSP 1 Score: 302 bits (774), Expect = 7.420e-97 Identity = 144/272 (52.94%), Postives = 200/272 (73.53%), Query Frame = 1 Query: 13 YLEGGFAYVPVQRVVTIVVARYRMGISRSLMEASNHFAFVASDS-RFGPLLQAGWFNMSKQYLGRDFGGADGT-DSDKIKPGMLNTLAERSMPLCMKQLHAALNREHKLKHWGRLQYGLFLKGAGLSVDDAMAFWQTMFTKIMGLDQFQKQYAYNVRHMYGKEGKRTNYTPYSCLKIIMGNPPAAGDHHGCPYRHYDEDHLSNLLSQVRVGGP-DKDAILRQVKSKNYQLACQRHFEATHKGHGT-SSVSSEGVGNHPNAWMHASMEFHKEK 816 Y+ G AYVP R+V+I+VA+YRM +S+SL+ A+ F V ++ R PLL++ M+ QYLGRD+G D ++D++ +++ A++SMPLCM QLHA + R+ KLKH GRLQYGLFLKG G+S ++ +AF+Q +FTKIM +QF K Y+YN+RHM+G+EGKR +Y+PYSC+KII+GNPP G+ HGCP+RHYD+ LS+LL+++ VG D+ AIL Q K++NYQLAC +HFE H G + +S GVGNHPNAW AS+ +HK K Sbjct: 226 YVHDGMAYVPQSRMVSIIVAKYRMALSKSLVRAALSFGEVTEENERIAPLLKS----MNSQYLGRDYGKEDTPLENDELTANTVDSYAKQSMPLCMSQLHAGMKRDSKLKHQGRLQYGLFLKGGGMSTEEHLAFFQRVFTKIMTTEQFNKNYSYNIRHMHGQEGKRASYSPYSCMKIILGNPPQGGESHGCPFRHYDDSSLSSLLTKLNVGSASDRSAILAQKKARNYQLACAKHFEVMHPGAASVEGLSMNGVGNHPNAWFAASVGYHKAK 493
BLAST of mRNA_L-elsbetiae_contig7061.15866.1 vs. uniprot
Match: A0A7S4A6J1_9STRA (DNA primase large subunit n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A6J1_9STRA) HSP 1 Score: 297 bits (761), Expect = 4.500e-95 Identity = 144/275 (52.36%), Postives = 193/275 (70.18%), Query Frame = 1 Query: 1 QQQVYLEGGFAYVPVQRVVTIVVARYRMGISRSLMEASNHFAFVASDSRFGPLLQAGWFNMSKQYLGRDFGGADGTDSDKIKPGMLNTLAERSMPLCMKQLHAALNREHKLKHWGRLQYGLFLKGAGLSVDDAMAFWQTMFTKIMGLDQFQKQYAYNVRHMYGKEGKRTNYTPYSCLKIIMGNPPAAGDHHGCPYRHYDEDHLSNLLSQVRVGGPDKDAILRQVKSKNYQLACQRHFEATHKG---HGTSSVSS-EGVGNHPNAWMHASMEFHKE 813 +++VYLE G+AYVP ++ +IVV+R+R +SRSL +AS A A+D R GPLL N+ K L R D D + I P ++ LA++SMPLCM+QLH AL R+HKLKHWGR QYGLFLK AGLS++D + F+Q FTKIM DQF K+YAYN+RH YGKEGKRT Y+PY C K++M P G++HGCPYRH+D DHL+ +LS+ + ++ +L + K +NYQ+ACQRHFE HK +G V++ +GVGNHPNAW AS +H++ Sbjct: 190 RREVYLEKGYAYVPQAKLHSIVVSRFRASLSRSLAKASGSLAAAAADPRLGPLLT----NVEKHDLERQ--DVDDDDIEGITPEQIDALADQSMPLCMQQLHYALKRDHKLKHWGRQQYGLFLKAAGLSMEDQLRFFQAEFTKIMTHDQFSKEYAYNIRHRYGKEGKRTEYSPYGCYKLVMDMAPGPGEYHGCPYRHFDADHLAAVLSKTSLDAGEQSLVLGKAKERNYQIACQRHFEFAHKKQTVNGKKVVANLDGVGNHPNAWFKASRVYHQD 458
BLAST of mRNA_L-elsbetiae_contig7061.15866.1 vs. uniprot
Match: A0A7S2UM83_9STRA (DNA primase large subunit n=2 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UM83_9STRA) HSP 1 Score: 288 bits (738), Expect = 1.650e-91 Identity = 137/277 (49.46%), Postives = 195/277 (70.40%), Query Frame = 1 Query: 1 QQQVYLEGGFAYVPVQRVVTIVVARYRMGISRSLMEASNHFAFVASDS-RFGPLLQAGWFNMSKQYLGRD--FGGADGTDSDKIKPGMLNTLAERSMPLCMKQLHAALNREHKLKHWGRLQYGLFLKGAGLSVDDAMAFWQTMFTKIMGLDQFQKQYAYNVRHMYGKEGKRTNYTPYSCLKIIMGNPPAAGDHHGCPYRHYDEDHLSNLLSQVRVGGP-DKDAILRQVKSKNYQLACQRHFEATHKGH-GTSSVSSEGVGNHPNAWMHASMEFHKEK 816 ++Q Y+E G AYVP+ ++V+IV ++ +S+SL A F+ V +++ R PLL++ M QY ++ G +D ++ ++T A +SMPLCM QLH+ L ++HKLKHWGRLQYGLFLKGAG+++++++ F+Q F KI+ +QF K Y+YN+RHMYGKEGKR +YTPY+C KII+GNPP +GDHHGCPYRHYD+ HLS+LL+++ +G P D+DAI+ K++N QLAC RHFEA H V+ + VGNHPNAW S+ +H K Sbjct: 209 KRQCYVEAGLAYVPLPKIVSIVTNKFTTALSKSLTNAGYAFSKVTNENGRINPLLKS----MHSQYADKNRYTTGEGMSDGQELTSQNVDTYAAQSMPLCMSQLHSGLQQDHKLKHWGRLQYGLFLKGAGMTMEESLMFFQREFGKIITAEQFNKNYSYNIRHMYGKEGKRASYTPYNCTKIILGNPPQSGDHHGCPYRHYDDTHLSSLLTKMNIGTPADRDAIMSHKKAQNPQLACVRHFEAVHPAATSVKGVTLDNVGNHPNAWFAGSVSYHAAK 481
BLAST of mRNA_L-elsbetiae_contig7061.15866.1 vs. uniprot
Match: K0RJG2_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RJG2_THAOC) HSP 1 Score: 285 bits (729), Expect = 3.880e-91 Identity = 141/281 (50.18%), Postives = 204/281 (72.60%), Query Frame = 1 Query: 1 QQQVYLEGGFAYVPVQRVVTIVVARYRMGISRSLMEASNHFAFVASD--SRFGPLLQAGWFNMSKQYLGRDFGGAD-GTDSDKI-KPGMLNTLAERSMPLCMKQLHAALNREHKLKHWGRLQYGLFLKGAGLSVDDAMAFWQTMFTKIMGLDQFQKQYAYNVRHMYGKEGKRTNYTPYSCLKIIMGNPPAAG-DHHGCPYRHYDEDHLSNLLSQVRVG-GPDKDAILRQVKSKNYQLACQRHFEATHKGHGT-SSVSSEGVGNHPNAWMHASMEFHKEKVG 822 +++ Y+E GFA+VP+ R+V+IVVA++R+ +S+S+ A F VA + +R GPLL++ M+ QY G A G D +++ ++ LA +SMPLCM+QLH L R+HKLKH GRLQ+GLFLKG+G+S+++ F+Q FT+IM +QF KQY+Y++RHM+GKEGKR +YTPY+C+KIIMGNPP +G +HHGCPY+HYD+ +LS LL ++++G D+DAI+R K N+QLAC + FE H T + V+ +GVGNHPNAW +AS+ +H+ K G Sbjct: 133 RRECYVEDGFAFVPLTRIVSIVVAKFRVSLSKSMALAVGAFGQVAHEESTRIGPLLKS----MNSQYTGPSTPDAMVGLDGERVLTAATVDGLAAQSMPLCMQQLHTGLKRDHKLKHQGRLQFGLFLKGSGMSLEEHTLFFQREFTRIMTSEQFNKQYSYSIRHMHGKEGKRASYTPYNCMKIIMGNPPQSGVEHHGCPYKHYDDQNLSALLGKLKIGDSADRDAIMRLKKEGNFQLACAKQFEVQHPLASTVAGVNMDGVGNHPNAWFNASVSYHQAKSG 409
BLAST of mRNA_L-elsbetiae_contig7061.15866.1 vs. uniprot
Match: B8CCN9_THAPS (DNA primase (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CCN9_THAPS) HSP 1 Score: 282 bits (722), Expect = 6.260e-90 Identity = 140/272 (51.47%), Postives = 191/272 (70.22%), Query Frame = 1 Query: 1 QQQVYLEGGFAYVPVQRVVTIVVARYRMGISRSLMEASNHFAFVASD--SRFGPLLQAGWFNMSKQYLGRDFGGA--DGTDSDKIKPGMLNTLAERSMPLCMKQLHAALNREHKLKHWGRLQYGLFLKGAGLSVDDAMAFWQTMFTKIMGLDQFQKQYAYNVRHMYGKEGKRTNYTPYSCLKIIMGNPPAAG-DHHGCPYRHYDEDHLSNLLSQVRVGG-PDKDAILRQVKSKNYQLACQRHFEATHKGH-GTSSVSSEGVGNHPNAWMHAS 795 +++ ++E GFAYVP+ R+V+IV A++R +S+SL A+ F VA+D SR GPLL++ M+ QY G A D + + + ++ LA +SMPLCM+QLH L R+HKLKH GRLQYGLFLKGAG+ +++ M F+Q FTKIM +QF K YAYN+RH +GKEGKR YTPY+C+KII GNPP G +HHGCPY+HYD+ +LS LL+++++GG D+DAI+ K N+QLAC +HFE H ++ +GVGNHPNAW AS Sbjct: 169 KRECFVEKGFAYVPLGRIVSIVAAKFRATLSKSLALAAGVFGQVANDESSRIGPLLKS----MNSQYTGPGAPNAVMDASGENALTAATVDALAAQSMPLCMQQLHVGLKRDHKLKHQGRLQYGLFLKGAGMPMEEHMLFFQREFTKIMTSEQFNKNYAYNIRHTHGKEGKRATYTPYNCMKIIFGNPPQTGVEHHGCPYKHYDDQNLSALLTKLKIGGLSDRDAIMAHKKEGNFQLACTKHFEVMHPAATSVEGINLDGVGNHPNAWFSAS 436 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7061.15866.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig7061.15866.1 >prot_L-elsbetiae_contig7061.15866.1 ID=prot_L-elsbetiae_contig7061.15866.1|Name=mRNA_L-elsbetiae_contig7061.15866.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=276bp QQQVYLEGGFAYVPVQRVVTIVVARYRMGISRSLMEASNHFAFVASDSRFback to top mRNA from alignment at L-elsbetiae_contig7061:116..7064+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig7061.15866.1 ID=mRNA_L-elsbetiae_contig7061.15866.1|Name=mRNA_L-elsbetiae_contig7061.15866.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=6949bp|location=Sequence derived from alignment at L-elsbetiae_contig7061:116..7064+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig7061:116..7064+ >mRNA_L-elsbetiae_contig7061.15866.1 ID=mRNA_L-elsbetiae_contig7061.15866.1|Name=mRNA_L-elsbetiae_contig7061.15866.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1656bp|location=Sequence derived from alignment at L-elsbetiae_contig7061:116..7064+ (Laminarionema elsbetiae ELsaHSoW15)back to top |