mRNA_L-elsbetiae_contig706.15863.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig706.15863.1
Unique NamemRNA_L-elsbetiae_contig706.15863.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig706.15863.1 vs. uniprot
Match: D8LE32_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE32_ECTSI)

HSP 1 Score: 1261 bits (3263), Expect = 0.000e+0
Identity = 629/722 (87.12%), Postives = 663/722 (91.83%), Query Frame = 2
Query:  440 RPNAAVASAAA-----EGMDAPKANVDDAGSSSVVA----EQGVPEDSDADPEADAL-VIGQQG--LLSGST-EDGATKDKNADRPWIKNMVEPSYALDLGSDSTAPKQGLSLASVRGIRSQGLTRGSLAYNRLGGLVYPAATIGVVYSRKTHSQRYFRGHGGKQISSLRVSPNGRFAASGEAGTRPTVRVWDAATSVELCSLPDHHRQGIASLAFSKDGRRLATVGVDSDKSLAVWRSCSGEWYDAELQATGKAGRGFGHVFFAEFSQSDDDELRVITGGVGHVKFWTLNGRLFNPRVGLFGKVGKRQTMLCGSAIAAARFVSGGVSGHLYVWKGRWLEKTLRAHQRCIHSVHHTAGGLVTAGKDGFVKLWSTQLAHLKTFDLNEATVPPLLRGVRSICASLDMTGSEVIKIAAVTAGSEVYEISQESGSMTLLQEGHFSGQLWGLAVHPTDGDIFATAGDDHSIRVWSISLGVMLRKAFVDGTCRALAWSPNGRLLLIGMGGSIGGERTRKDGAFLLFDVSNMEIVFEGRDSRSWIRACCFSPDGKSFAIASTDNKVYIYDSMSYTLKAKAQKHNAPLVALDFSEDSNYVQSASDDNELLYHSAGDGLPFAVQAQLKHIKWAEYTCPFGWPVQGAWQPIAEEDAPTLTSLHRSHDKALLVTADDAGNVKLFRYPVLSKQAGYKLVSGHVGGISCVRFTADDTHIVSIGKGDRAVLIWKVD 2566
            RPNAAVASAA      EG DAPKANV D    S  A    E   PEDSDADPEAD L   GQQG  LLS S  E G  +DKN DRPW+KNM+EPSYALDLG+D++APKQ +SLASVRGIRSQGL RGSLAYNR+GGLVYPAATIGVVYSRKTHSQ YFRGH GKQI  LRVSPN RF ASGEAGTRPTVRVWDAATSVELC+LP +HRQGIASLAFSKDGRRLATVGVDSDKSLAVWRSCSGEWYDAELQATGK GRGFGHVFFAEFS SDDDELRVITGGVGHVKFW LNGRLFN R+GLFGKVGKRQTMLCG+AIAAARFVSGGVSGHLYVWKGRWLEKTLRAHQRCI+SVHHTAGGLVT GKDGFVKLWSTQLAHLKTFDL+EATVPPLLRGVRS+CASLD+TGSEVIKIAAVTAGSEVYEIS+ESGSM LLQEGHFSGQLWGLAVHPTDGDIFATAGDDHSIRVWS+SLGVMLRKA+VDGTCRALAWSP+GRLLLIGMGGSIGGERTRKDG FL+FDV NMEI++EGRDSRSWIRACCFSPDGKSFA+ASTDNK+YIYDS SY LKAKAQKHN+PLVALDFSEDSNYVQSAS+DNELLYHSAGDGLPFAVQAQLKHIKW++YTCPFGWPVQGAW P+AEE+A TLTSLHRSHD+ LLVTADDAGNVKLFRYP LSKQAGYKLVSGHVGGISCVRFTADD HIVSIGKGDRA+ +WKVD
Sbjct: 1405 RPNAAVASAATSGAAREGPDAPKANVGDPSDPSEAAXXXAEGPAPEDSDADPEADVLGTAGQQGGGLLSASNGEGGRAEDKNVDRPWVKNMIEPSYALDLGNDTSAPKQSVSLASVRGIRSQGLARGSLAYNRVGGLVYPAATIGVVYSRKTHSQGYFRGHAGKQIIFLRVSPNQRFVASGEAGTRPTVRVWDAATSVELCTLPHYHRQGIASLAFSKDGRRLATVGVDSDKSLAVWRSCSGEWYDAELQATGKGGRGFGHVFFAEFSHSDDDELRVITGGVGHVKFWALNGRLFNARMGLFGKVGKRQTMLCGTAIAAARFVSGGVSGHLYVWKGRWLEKTLRAHQRCINSVHHTAGGLVTGGKDGFVKLWSTQLAHLKTFDLSEATVPPLLRGVRSVCASLDVTGSEVIKIAAVTAGSEVYEISRESGSMMLLQEGHFSGQLWGLAVHPTDGDIFATAGDDHSIRVWSVSLGVMLRKAYVDGTCRALAWSPDGRLLLIGMGGSIGGERTRKDGTFLIFDVYNMEILYEGRDSRSWIRACCFSPDGKSFAVASTDNKIYIYDSKSYALKAKAQKHNSPLVALDFSEDSNYVQSASEDNELLYHSAGDGLPFAVQAQLKHIKWSQYTCPFGWPVQGAWPPVAEENAATLTSLHRSHDRTLLVTADDAGNVKLFRYPALSKQAGYKLVSGHVGGISCVRFTADDAHIVSIGKGDRAIFVWKVD 2126          
BLAST of mRNA_L-elsbetiae_contig706.15863.1 vs. uniprot
Match: A0A6H5J7H9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7H9_9PHAE)

HSP 1 Score: 896 bits (2316), Expect = 0.000e+0
Identity = 426/473 (90.06%), Postives = 452/473 (95.56%), Query Frame = 2
Query: 1148 QATGKAGRGFGHVFFAEFSQSDDDELRVITGGVGHVKFWTLNGRLFNPRVGLFGKVGKRQTMLCGSAIAAARFVSGGVSGHLYVWKGRWLEKTLRAHQRCIHSVHHTAGGLVTAGKDGFVKLWSTQLAHLKTFDLNEATVPPLLRGVRSICASLDMTGSEVIKIAAVTAGSEVYEISQESGSMTLLQEGHFSGQLWGLAVHPTDGDIFATAGDDHSIRVWSISLGVMLRKAFVDGTCRALAWSPNGRLLLIGMGGSIGGERTRKDGAFLLFDVSNMEIVFEGRDSRSWIRACCFSPDGKSFAIASTDNKVYIYDSMSYTLKAKAQKHNAPLVALDFSEDSNYVQSASDDNELLYHSAGDGLPFAVQAQLKHIKWAEYTCPFGWPVQGAWQPIAEEDAPTLTSLHRSHDKALLVTADDAGNVKLFRYPVLSKQAGYKLVSGHVGGISCVRFTADDTHIVSIGKGDRAVLIWKVD 2566
            QATGK GRGFGHVFFAEFS SDDDELRVITGGVGHVKFW LNGRLFN R+GLFGKVGKRQTMLCG+AIAAARFVSGGVSGHLYVWKGRWLEKTLRAHQRC++SVHHTAGGLVT GKDGFVKLWSTQLAHLKTFDL+EATVPPLLRGVRS+CASLD+TGSEVIKIAAVTAGSEVYEIS+ESGSM LLQEGHFSGQLWGLA HPTDGDIFATAGDDHSIRVWS+SLGVMLRKA+VDGTCRAL WSP+GRLLLIGMGGSIG ERTRKDG FL+FDV NMEI++EGRDSRSWIRACCFSPDGK+FA+ASTDNK+YIYDS SY LKAKAQKHN+PLVALDFSEDSNYVQSAS+DNELLYHS GDGLPF VQAQLKHIKW++YTCPFGWPVQGAW P+AEE+A TLTSLHRSHD+ LLVTADDAGNVKLFRYP LSKQAGYKLVSGHVGGISCVRFTADD HIVSIGKGDRA+ +WKVD
Sbjct:    8 QATGKGGRGFGHVFFAEFSHSDDDELRVITGGVGHVKFWALNGRLFNARMGLFGKVGKRQTMLCGTAIAAARFVSGGVSGHLYVWKGRWLEKTLRAHQRCVNSVHHTAGGLVTGGKDGFVKLWSTQLAHLKTFDLSEATVPPLLRGVRSVCASLDVTGSEVIKIAAVTAGSEVYEISRESGSMMLLQEGHFSGQLWGLAAHPTDGDIFATAGDDHSIRVWSVSLGVMLRKAYVDGTCRALGWSPDGRLLLIGMGGSIGCERTRKDGTFLIFDVYNMEILYEGRDSRSWIRACCFSPDGKTFAVASTDNKIYIYDSKSYGLKAKAQKHNSPLVALDFSEDSNYVQSASEDNELLYHSVGDGLPFTVQAQLKHIKWSQYTCPFGWPVQGAWPPVAEENAATLTSLHRSHDRTLLVTADDAGNVKLFRYPTLSKQAGYKLVSGHVGGISCVRFTADDAHIVSIGKGDRAIFVWKVD 480          
BLAST of mRNA_L-elsbetiae_contig706.15863.1 vs. uniprot
Match: A0A6U4DXH9_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4DXH9_9STRA)

HSP 1 Score: 562 bits (1449), Expect = 1.780e-185
Identity = 280/643 (43.55%), Postives = 401/643 (62.36%), Query Frame = 2
Query:  653 RPWIKNMVEPSYALDLGSDSTAPKQGLSLASVRGIRSQGLTRGSLAYNRLGGLVYPAATIGVVYSRKTHSQRYFRGHGGKQISSLRVSPNGRFAASGEAGTRPTVRVWDAATSVELCSLPDHHRQGIASLAFSKDGRRLATVGVDSDKSLAVWRSCSGEWYDAELQATGKAGRGFGHVFFAEFSQSDDDELR--VITGGVGHVKFWTLNGRLFNPRVGLFGKVGKRQTMLCGSAIAAARFVSGGVSGHLYVWKGRWLEKTLRAHQRCIHSVHHTAGGLVTAGKDGFVKLWSTQLAHLKTFDLNEATVPPLLRGVRSICASLDMTGSEVIKIAAVTAGSEVYEISQESGSMTLLQEGHFSGQLWGLAVHPTDGDIFATAGDDHSIRVWSISLGVMLRKAFVDGTCRALAWSPNGRLLLIGMGGSIGGERTRKDGAFLLFDVSNMEIVFEGRDSRSWIRACCFSPDGKSFAIASTDNKVYIYDSMSYTLKAKAQKHNAPLVALDFSEDSNYVQSASDDNELLYHSAGDGLPFAVQAQLKHIKWAEYTCPFGWPVQGAWQPIA---EEDAPTLTSLHRSHDKALLVTADDAGNVKLFRYPVLSKQAGYKLVSGHVGGISCVRFTADDTHIVSIGKGDRAVLIWKVD 2566
            +PW+ +++EPS       +S+ P Q +    V G  +Q      L+YN  G L+ P AT   +Y+++ + Q ++RGH  + I+ L  S +G +AA+GE   RP V VWDA T  ++  LP+HHRQ I S+A S D RR  +V  D+D S+AVW S SG WYD  LQA  K       V FA F  +   E    V +GGV HVKFWTL+GR    +  L   VG  QT  CG+A A  RFVSG  SGH+YVW GR L++ +RAH+  + S+     G  + G DGF KLW+ Q+ H+++FD++EA V PL   + S+   +D     +  +   TAG E+YE++ +SGSM L+ EGH  G+LWG+A HP D  IFAT GDD +IR+W + +  MLRK  +D T R++ WSP+G  LL+G+GGS  GERTRKDGAFL+ D   +E++FEGRDSR WIR   FSPDG +  +AS+D+ +YIY + S  L+AK  KHNA +  +D S+D+ +VQS S D E LYH+A DG  F++ +QLK+++W  +TC +GWPVQG W       E+  P +T   RS ++ ++ + D+ G V+L RYP +++ A ++    H G ++ V  + D  + VS+GK DRA+++W++D
Sbjct:   16 KPWLASIIEPSDPPP--PNSSMPAQEMVPDFVHGFNNQPGV--GLSYNSCGDLLIPLATACAIYNKQNNEQLFYRGHK-RGITCLATSVDGHYAATGEKAARPRVHVWDAQTGAQIIRLPEHHRQAIVSVALSHDNRRCVSVAADADHSIAVWFSDSGGWYDGRLQACAKG--DISDVHFASFLGAAGTEFGFDVASGGVNHVKFWTLDGRTLTEKRALHRGVGMVQTHYCGAA-AGQRFVSGAQSGHIYVWTGRNLQRIIRAHEEAVTSIFACKHGFASGGLDGFAKLWNLQVKHVRSFDMHEAPVAPLEGSITSVSLKVDPADKFITTLMVGTAGGEIYELAVDSGSMVLIGEGHGKGELWGVACHPHDAFIFATCGDDQTIRIWDVKVRAMLRKCVIDNTARSIVWSPDGTKLLVGLGGSESGERTRKDGAFLILDGETLEVLFEGRDSRHWIRDAKFSPDGSTIVLASSDHNIYIYTTSSLQLRAKCDKHNAAVTNVDLSKDNTFVQSDSSDFEHLYHNAVDGRHFSLPSQLKNVQWDTWTCIYGWPVQGLWPSFKQQQEQGLPDITCCFRSANEDVVASGDEHGGVRLHRYPAVNRNAAFRHDRFHAGAVARVGMSCDGKYAVSVGKKDRALVVWRLD 650          
BLAST of mRNA_L-elsbetiae_contig706.15863.1 vs. uniprot
Match: A0A7S3JVR1_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JVR1_9STRA)

HSP 1 Score: 548 bits (1412), Expect = 9.790e-166
Identity = 289/663 (43.59%), Postives = 401/663 (60.48%), Query Frame = 2
Query:  644 NADRP-WIKNMVEPSYALDLGSDSTAPKQGLSLASVRGIRSQGLTRGSLAYNRLGGLVYPAATIGVVYSRKTHSQRYFRGH-GGKQISSLRVSPNGRFAASGEAGTRPTVRVWDAATSVELCSLPDHHRQGIASLAFSKDGRRLATVGVDSDKSLAVWRSCSGEWYDAELQAT-GKAGRGFGHVFFAEFSQSDDDELRVITGGVGHVKFWTLNGRLFNPRVGLFGKVG---KRQTMLCGSAIAAARFVSGGVSGHLYVWKGRWLEKTLRAHQRCIHSVHHTAG--GLVTAGKDGFVKLWSTQLAHLKTFDLNEATVPPLLRGVRSICASL---------DMTGSEVIKIAAVTAGSEVYEISQESGSMTLLQ-EGHFSGQLWGLAVHPTDGDIFATAGDDHSIRVWSISLGVMLRKAFVDGTCRALAWSPNGRLLLIGMGGSIGGERTRKDGAFLLFDVSNMEIVFEGRDSRSWIRACCFSPDGKSFAIASTDNKVYIYDSMSYTLKAKAQKHNAPLVALDFSEDSNYVQSASDDNELLYHSAGDGLPFAVQAQLKHIKWAEYTCPFGWPVQGAWQPIAEEDAPT----LTSLHRSHDKALLVTADDAGNVKLFRYPVLSKQAGYKLVSGHVGGISCVRFTADDTHIVSIGKGDRAVLIWKVD 2566
            NA  P W+  +V PS A+    +S+ PK  L L    G + +   R S+ YN LG  VYP+  + V+YS ++H+QR++RGH  G  +S++  +PNG F ASG+   RP + VWD         L   HR+ ++SL+FS D RRL +VG DSD SLAVWRS SGEWYD  LQA      R      F   + S  D+  + +GG GHV FWTL GR       L+ +     + +++LCG+A+   RFV+G   G L VWKGR  EK+++AH   I S+H  +G  G  T  +DG VKLWS++  H+K+F++ EA VPPL   +RS+   L         D +  ++++I    A SEVYEI++ESGS+TL   EGH+   LW L VHP+D D+FATAGDD ++RVWS+S   +LRKA +DG  R++AWSP+G  LL+GMGG+  G R  KDG FLL D + + +  E RDSR W R   FSPDG  FA  STD+K+Y+YD+ S  L  K+  HNA +  +DFS DS ++QS + D E LYH   DG    + +QLK I+W  ++C +GWPVQG W  ++ E        +T++ R+  ++LL   DDAG V+LFRYP L  Q   K    H   ++ + FT D +H++SIGK DR + IW+V+
Sbjct: 1749 NATTPKWLLAVVPPSDAVHKAVESSPPKLKLRLVWSHGCQVE---RSSIVYNALGEAVYPSGKLCVIYSPRSHTQRFYRGHHAGGPVSAIGAAPNGLFLASGDVAKRPRIHVWDGRAGSTAVILKSFHRRSVSSLSFSADSRRLVSVGADSDGSLAVWRSLSGEWYDGLLQAAVHSCDRTVRFACFGVSNTSSIDKFEICSGGDGHVYFWTLCGRELVSSEALWTEQQHHHRHKSVLCGAAVND-RFVTGLSDGQLLVWKGRVCEKSIKAHDDAIESMHAASGEAGFATGSRDGVVKLWSSRFRHIKSFEITEAPVPPLEPRIRSVHLGLAAAANSLSSDSSTKKIVRILVACASSEVYEIAKESGSITLFPGEGHYLNDLWALCVHPSDPDVFATAGDDMTVRVWSVSAKRLLRKAKLDGPLRSIAWSPDGTKLLLGMGGTKSGTRHPKDGVFLLLDATTLRVTHEARDSRYWFRVASFSPDGTKFAFGSTDHKIYLYDTHSTNLIQKSASHNAYITHIDFSTDSKFIQSDAADFEHLYHETSDGSQIRLPSQLKDIQWHTWSCIYGWPVQGCWPSLSGEKHRDPRIKITAVSRNPRQSLLAAGDDAGEVRLFRYPSLQNQLSVKCSHSHASELASLDFTCDGSHLISIGKHDRTIAIWQVE 2407          
BLAST of mRNA_L-elsbetiae_contig706.15863.1 vs. uniprot
Match: A0A8J2SIX3_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SIX3_9STRA)

HSP 1 Score: 521 bits (1342), Expect = 2.810e-156
Identity = 267/646 (41.33%), Postives = 383/646 (59.29%), Query Frame = 2
Query:  653 RPWIKNMVEPSYALDLGSDSTAPKQGLSLASVRGIRSQGLTRGSLAYNRLGGLVYPAATIGVVYSRKTHSQRYFRGHGGKQISSLRVSPNGRFAASGEAGTRPTVRVWDAATSVELCSLPDHHRQGIASLAFSKDGRRLATVGVDSDKSLAVWRSCSGEWYDAELQATGKAGRGFGHVFFAEFSQSDDDELRVITGGVGHVKFWTLNGRLFNPRVGLFGKVGKRQTMLCGSAIAAARFVSGGVSGHLYVWKGRWLEKTLRAHQRCIHSVHHTA----GGLVTAGKDGFVKLWSTQLAHLKTFDLNEATVPPLLRGVRSICASLDMTGSEVIKIAAVTAGSEVYEISQESGSMTLLQEGHFSGQLWGLAVHPTDGDIFATAGDDHSIRVWSISLGVMLRKAFVDGTCRALAWSPNGRLLLIGMGGSIGGERTRKDGAFLLFDVSNMEIVFEGRDSRSWIRACCFSPDGKSFAIASTDNKVYIYDSMSYTLKAKAQKHNAPLVALDFSEDSNYVQSASDDNELLYHSAGDGLPFAVQAQLKHIKWAEYTCPFGWPVQGAWQPIA----EEDAPTLTSLHRSHDKALLVTADDAGNVKLFRYPVLSKQAGYKLVSGHVGGISCVRFTADDTHIVSIGKGDRAVLIWKVD 2566
            +PW+   V P+ A     +   P   L++  + G +++ L+RG++AYN  G ++Y    + V+Y+R  H+Q Y+ GH  + +S+L  SP GRF ASG+   R  V +WDA     + +LP  HR    ++AF+ D RRLA+VG D+D SLAVWRS SGEW+D +L A   AG      F    +  D   L + TGG GH  FW + G   +    L+G     Q +LCG+A+   R V+G   GHLYVWK R   K +RAH+R + ++H        G  T G DGFVKLW+ +  H++T+DL EA  PPL   +  +   + +    V +I   TAG+EVYE++  SG+ TL+ EGH++G+ W LA +P D ++FATAGDD ++RVWS+S   + RKA +D   R LAW+P+G  LL G+GG++ G R  KDG F+L DV+ + +  EGRDSR WIR   FSP G +FA+ S+D KVYIYDS +  L+A+   HNAP+  LD+S D  +VQS + D E LYH A DG P  + +QL+   +  +TC +GWPVQG W  ++     +    + +  R+    LL   D AG V+L RYP   +         HVG ++ V FTADD  +++IG+ DRA+++W VD
Sbjct: 1726 KPWLLACVPPTRAPRAVLEP--PDATLAVRWIHGCQAE-LSRGAVAYNGAGNIIYACGHVCVIYARAPHAQWYYAGHT-RLVSALAASPCGRFVASGDRARRARVHIWDAHAGATVVTLPPRHRGATWAIAFAPDSRRLASVGADNDGSLAVWRSLSGEWHDGDLLALAAAGDRPVR-FTCWMTARDTGGLELATGGDGHAYFWRVAGGTLDAAEPLWGAADPAQRLLCGAAVGD-RVVTGTRGGHLYVWKDRCCAKAVRAHERGLEAIHAAGPNGMAGFATGGADGFVKLWTARCVHVRTYDLTEAPAPPLRPAI--VAVHIGLARGSVARILVQTAGAEVYEVAAASGAATLIAEGHYTGEAWALATNPADSELFATAGDDATVRVWSVSADKLARKAALDAPVRCLAWAPDGATLLAGLGGNVSGARHPKDGTFVLLDVATLRVRAEGRDSRHWIRCAAFSPTGDAFALGSSDQKVYIYDSATARLRARCLAHNAPVAQLDWSLDGRHVQSDATDGEHLYHLASDGAPVRLPSQLRDAAFDSWTCIYGWPVQGCWPALSGDLDRDRTVDVAAADRARTTPLLANGDTAGTVRLVRYPCAQQARSRACAFHHVGPVARVCFTADDCALITIGRQDRAIVVWNVD 2363          
BLAST of mRNA_L-elsbetiae_contig706.15863.1 vs. uniprot
Match: A0A482RZ87_9ARCH (HELP domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RZ87_9ARCH)

HSP 1 Score: 473 bits (1218), Expect = 1.960e-148
Identity = 263/683 (38.51%), Postives = 393/683 (57.54%), Query Frame = 2
Query:  653 RPWIKNMVEPSYALDLGSDSTAPKQGLSLASVRGIRSQGLTRGSLAYNRLGGLVYPAATIGVVYSRKTHSQRYFRGHGGKQISSLRVSPNGRFAASGEAGTRPTVRVWDAATSVELCSLPDH--HRQGIASLAFSKDGRRLATVGVDSDKSLAVWRSCSGEWY-DAELQATGKAGRGFGHVFFAEF-------------SQSDDDELRVITGGVGHVKFWTLNGRLFNPRVGLFGKVGKRQTMLCGSAIAAARFVSGGVSGHLYVWKGRWLEKTLRAHQRCIHSVHHTAGGLV-TAGKDGFVKLWSTQLAHLKTFDLNEATVPPLLRGVRSICASLDMTGSEVIKIAAVTAGSEVYEISQESGSMTLLQEGHFSGQLWGLAVHPTDGDIFATAGDDHSIRVWSISLGVMLRKAFVDGTCRALAWSPNGRLLLIGMGGSIGGERTRKDGAFLLFDVSNMEIVFEGRDSRSWIRACCFSPDGKSFAIASTDNKVYIYDSMSYTLKAKAQKHNAPLVALDFSEDSNYVQSASDDNELLYHSAGDGLPFAVQAQLKHIKWAEYTCPFGWPVQGAWQPIAEEDAPT---LTSLHRSHDKALLVTADDAGNVKLFRYPVLSKQAGYKLVSGHVGGISCVRFTADDTHI--------------------------VSIGKGDRAVLIWKV 2563
            RPW+  +VEPS A D     T  K  L+L  + G +S+ LTR +++YN    ++Y  +    V+++K + Q +++ H   Q+ ++ VS +G+  AS E   RP + +WD++++ ++     H  HR+G+ SL FS + + L ++G D D ++A+W S SG W  DA L A  K       V F  F             S S    +   +GG  HVKFW+  G    P  G + K  K  T+LCGS +   + V+G  SGHLYVWKGR L++ +RAH++ I S+ +    +V TA KDG VK+W+    H+K   L +A +PP++  + SI   +  +   ++++   T   EVY++   SG + LL EGH+ G+L GLAV+P + D F T GDD +IR+WSI    +++KA +D T RA+ +S NG+LL++G+GG   G R RKDGAFLL D + ++  +EGRDSR W+    FSPDGKSFA+ S D+K+YIY S S+ LK    +HNA +V +DFS D +Y+QS S D E L+  A DG  F+V +QL+ I W+++TC +GWPVQG W  + E+   T    ++ HRS ++ LL   D  G VKL  YP LSK+A      GHVG +S V+FTAD  ++                          +S G+ DR++++W+V
Sbjct:  223 RPWVGAIVEPSNARDFEVAQTL-KHRLNLLHIYGYQSK-LTRQAVSYNCNYDVLYATSRYVAVFNKKQNKQIFYQQHQ-HQVCAMAVSKDGKLVASVEKTLRPQIHIWDSSSAQQINCFDTHIVHRKGVLSLQFSDNKQHLVSLGADEDHTIALWTSVSGNWVQDAVLSAWSKG--DIHPVLFVTFYSFDLPATPSYSSSNSMYHSILFASGGRFHVKFWSFTGTSIEPYYGEYSKQIKINTLLCGSRVGR-QLVTGSTSGHLYVWKGRKLDRYIRAHEKGITSIAYFQNNIVATASKDGIVKIWTADFQHMKNLSLADADIPPIVNSINSIDGIV--SEKHLLQLMVSTTSGEVYDMYVTSGRINLLLEGHYDGELRGLAVNPVNPDEFVTVGDDKTIRIWSIKHRRLVKKALIDCTARAVDYSSNGKLLIVGLGGRADGSRQRKDGAFLLLDAATLKPKYEGRDSRHWLTDVKFSPDGKSFALCSMDHKIYIYYSDSFKLKGTCSRHNAAVVHVDFSVDGHYLQSDSTDYEHLFFEAEDGEYFSVPSQLRDILWSDWTCIYGWPVQGIWPVLDEQGQSTGAEPSACHRSPNQKLLAVGDHGGKVKLLSYPCLSKRATSLQADGHVGSVSRVKFTADGRYVCFSTCSSLPYIPLYLLSYDFWFRRYLISTGEEDRSIILWEV 897          
BLAST of mRNA_L-elsbetiae_contig706.15863.1 vs. uniprot
Match: A0A7S2PDC6_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PDC6_9STRA)

HSP 1 Score: 472 bits (1214), Expect = 1.070e-147
Identity = 258/661 (39.03%), Postives = 389/661 (58.85%), Query Frame = 2
Query:  611 GSTEDGATKDKNADRPWIKNMVEPSYALDLGSDSTA-PKQGLSLASVRGIRSQGLTRGSLAYNRLGGLVYPAATIGVVYSRKTHSQRYFRGHGGKQISSLRVSPNGRFAASGEAGTRPTVRVWDAATSVELCSLPDHHRQGIASLAFSKDGRRLATVGVDSDKSLAVWRSCSGEWYDAELQATGKAGRGFGHVFFAEFSQSDDDELRVITGGVGHVKFWTLNGRLFNPRVGLFGKVGKRQTMLCGSAIAAARFVSGGVSGHLYVWKGRWLEKTLRAHQRCIHSVHHTAGGLVTAGKDGFVKLWSTQLAHLKTFDLNEATVPPL----LRGVRSICASLDMTGSEVIKIAAVTAGSEVYEISQESGSMTLLQEGHFS-GQLWGLAVHPTDGDIFATAGDDHSIRVWSISLGVMLRKAFVDGTCRALAWSPNGRLLLIGMGGSIGGERTRKDGAFLLFDVSNMEIVFEGRDSRSWIRACCFSPDGKSFAIASTDNKVYIYDS---MSYTLKAKAQKHNAPLVALDFSEDSNYVQSASDDNELLYHSAGDGLPFAVQAQLKHIKWAEYTCPFGWPVQGAWQPIAEEDA-PTLTSLHRSHDKALLVTADDAGNVKLFRYPVLSKQAGYKLVSGHVGGISCVRFTADDTHIVSIGKGDRAVLIWKV 2563
            G+T       K+  RPW+ ++VEPS        +   PK  L L  V G +SQ + + +LAYN+ G LV+ AA++ V+ +R    Q ++R H   QIS L VSP GR AA+G+   RP +++WDA T+V + SL  HHR+G+ ++ FS D + L ++G D   SLAVW S +GEW+D  L++    G     VFF +F+    D   +++GG+ H+KFWT +G   +P   +F    K  +M+CG A+   RFV+G   G L+ W GR LE+ + AH +CI +++ T   LVT   DG VKLWS  L  +  ++L+E     +    L    SIC       S V KI   +  S++YEIS  +G + LL EGH   G++WGLA+HP + D+FAT GDD S RVWSI    +L+K  +D   R++ WS +G+ L++G G     ++    G+F++ +   ++  FEGR S  W+     SP+G++ A+A+++N++ I ++    +Y +     KHNA + ++DFS DS  +QS+S+D E LYH A DG    + +QLK I+W  YTC +GWPVQG W   A     P  TS HRS  + LL+T    G++KL+ YPVLSK + +   SGH+G IS  RF+ D+  +V++G+ DR +L+W++
Sbjct:  266 GATLSTDETSKSMARPWVTSIVEPSITKRQSEPNLENPKVKLELMHVHGFQSQCI-KNALAYNQKGDLVFSAASLCVIQNRFYRGQMHYRQHK-HQISCLTVSPTGRLAATGDFSLRPQIQIWDANTAVNIASLRKHHRRGVLNVDFSLDSKLLVSLGADDGHSLAVWYSATGEWHDWILRSQSNCGPET--VFFTKFTVPRTD-FAIVSGGISHLKFWTSHGPHLSPAKAVFNGKSKMTSMICG-ALLGYRFVTGSEEGSLFAWSGRSLEEVVAAHSKCISAMYSTRDQLVTGSDDGTVKLWSPDLEVISLYNLHEKLGLNISISCLFAASSIC-------SRVTKILVGSLDSDIYEISASTGDVFLLHEGHGGCGEVWGLAMHPLESDLFATCGDDSSARVWSIKSRKLLQKRIMDRPLRSIIWSNDGKELIVGCGSPH--KKESYHGSFIILEADTLKTKFEGRGSNYWVTDMKCSPNGETIAMATSENEIIIIENDIKRNYRVLTAIDKHNARINSIDFSVDSYVIQSSSNDYEHLYHGAEDGEQINLTSQLKMIEWKTYTCTYGWPVQGIWPKKANIGKDPEPTSAHRSTSETLLITGYTNGDIKLYNYPVLSKDSKFCSESGHIGHISKCRFSCDEKSLVTVGRRDRTMLVWRI 911          
BLAST of mRNA_L-elsbetiae_contig706.15863.1 vs. uniprot
Match: A0A7S2W8N2_9STRA (Hypothetical protein (Fragment) n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2W8N2_9STRA)

HSP 1 Score: 457 bits (1176), Expect = 5.570e-145
Identity = 253/673 (37.59%), Postives = 376/673 (55.87%), Query Frame = 2
Query:  626 GATKDKNAD-------RPWIKNMVEPSYALDLGSDSTAPKQGLS--LASVRGIRSQGLTRGSLAYNRLGGLVYPAATIGVVYSRKTHSQRYFRGHGGKQISSLRVSPNGRFAASGEAGT------RPTVRV--WDAATSVELCSLPDHHRQGIASLAFSKDGRRLATVGVDSDKSLAVWRSCSGEWYDAELQATGKAGRG--FGHVFFAEFSQSDDDELRVITGGVGHVKFWTLNGRLFNPRVGLFGKVGKRQTMLCGS-------AIAAARFVSGGVSGHLYVWKGRWLEKTLRAHQRCIHSVHHTAGGLVTAGKDGFVKLWSTQLAHLKTFDLNEATVPPLLRGVRSICASLDMTGSEVIKIAAVTAGSEVYEISQESGSMTLLQEGHFSGQLWGLAVHPTDGDIFATAGDDHSIRVWSISLGVMLRKAFVDGTCRALAWSPNGRLLLIGMGGSIGGERTRKDGAFLLFDVSNMEIVFEGRDSRSWIRACCFSPDGKSFAIASTDNKVYIYD-SMSYTLKAKAQKHNAPLVALDFSEDSNYVQSASDDNELLYHSAGDGLPFAVQAQLKHIKWAEYTCPFGWPVQGAWQPIAEEDAPTLTSLHRSHDKALLVTADDAGNVKLFRYPVLSKQAGYKLVSGHVGGISCVRFTADDTHIVSIGKGDRAVLIWKV 2563
            G T  K AD       RPWI  ++ P+ A    +    P + ++  L  V G RS G  R +L YN +G +VY  +++G++Y +  HSQ ++ GH G  I SL + P G++ A+GE         R  VRV  W+A T  ++  L   H    + LAFS DG RL +VG D + S+AVWRS SG W DA+L A    G+    G +F             + T GV H+ FW L+G++  P  GLFG+ GK Q +LC         A + ++ V+G V+GHLY+W G  + K+++ H+R ++++H    G++T  KDG VKLW T+L+ ++TFD+ EA   P    VRS+C S      E   +   T GSE+YEI+ E+ S  L+ +GH   +L  +A HP D ++F T GDD+++R+W  S   M+ +  V    RA+AWSPNG  + +G+GGS+G  R  KDG  L+ D +++++V E RD+R WI    +SPDG + AIA+ DNK+Y+YD S +Y L+ K + HN+ ++ +DFSEDS Y++S     +LL+H   DG      + LK +K+   TC   W VQG W  +   D     +   + D  LL + DD G + +F YP L+K +       HV  ++ VRF +D T I + G  DRA+  WK+
Sbjct:    4 GPTGMKGADDAEFVAVRPWISAVIPPTGAPTPQAKMAEPPENINVELEFVYGYRS-GDVRNNLRYNSVGQMVYHTSSVGIIYDKAQHSQIFYLGHDGHPIISLAMDPGGKYVATGEGSCSNRKRDRGLVRVHIWNALTGAQIIKLAATHVSAASQLAFSGDGSRLVSVGEDENHSVAVWRSDSGTWVDAQLLALAMGGQEKIMGVIFHGP--------THLATCGVNHITFWNLDGQVLTPTKGLFGRKGKVQPLLCAGVMSYANVATSVSKVVTGTVTGHLYIWAGAEVIKSIKGHERSVNAIHSCQFGIITGSKDGVVKLWDTKLSPIRTFDMTEAIPTPHRPPVRSVCWS-----PERATVLIGTQGSEIYEITTENQSTVLITQGHSMDELHSIATHPKDPNLFVTGGDDYTVRLWDASKRRMVLETMVGCMSRAVAWSPNGETIGVGLGGSVGRGRQTKDGGVLILDGTSLKLVHETRDAREWIVDAKYSPDGATLAIAAMDNKIYLYDVSKNYELRCKCEGHNSFVMHIDFSEDSEYIRSNCGGYDLLFHKCEDGTVINSPSMLKDVKFTTTTCTLCWHVQGMWPEVT--DKTNYNACDVAEDIDLLASVDDEGYLNIFNYPCLTKGSVPLKYRAHVSQVTNVRFNSDRTRIFTTGGPDRAICQWKL 660          
BLAST of mRNA_L-elsbetiae_contig706.15863.1 vs. uniprot
Match: A0A7S3UW80_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UW80_HETAK)

HSP 1 Score: 421 bits (1083), Expect = 1.650e-130
Identity = 252/692 (36.42%), Postives = 384/692 (55.49%), Query Frame = 2
Query:  533 EQGVPEDSDADPEADALV----IGQQGLLSGSTEDGATKDKNADRPWIKNMVEPSYALDLGSDSTAPKQGLSLASVRGIRSQGLTRGSLAYNRLGGLVYPAATIGVVYSRKTHSQRYFRGHGGKQISSLRVSPNGRFAASGEAGTRPTVRVWDAATSVELCSLPDHHRQGIASLAFSKDGRRLATVGVDSDKSLAVWRSCSGEWYDAELQATGKAGRGFGHVFFAEFSQSDDDELRVITGGVGHVKFWTLNGRLFNPRVGLFGKVGKRQTMLCGSAIAAARFVSGGVSGHLYVWKGRWLEKTLR-AHQRCIHSVHHT-AGGLVTAGKDGFVKLWSTQLAHLKTFDL---NEATVPPLLRGVRSICASLDMTGSEVIKIAAVTAGSEVYEISQESGSMTLLQEGHFS-GQLWGLAVHPTDGDIFATAGDDHSIRVWSISLGVMLRKAFVDGTCRALAWSPNGRLLLIGMGGSIGGERTRKDGAFLLFDVSNMEIVFEGRDSRSWIRACCFSPDGKSFAIASTDNKVYIYDSMS---YTLKAKAQKHNAPLVALDFSEDSNYVQSASDDNELLYH--SAGDGLPFAVQAQLKHIKWAEYTCPFGWPVQGAWQPIAEEDAPTLTSLHRSHDKALLVTADDAGNVKLFRYPVLSKQAGYKLVSGHVGGISCVRFTADDTHIVSIGKGDRAVLIWKV 2563
            E+  PE  D + + D  +    +GQ G+ + +  D    +  A +PW+  +  PS       D +AP+  L L +  G R   L R +LA N     V+ AA +GV+  R+   Q +F GH    +++L VS +GR+  SG+ G RP V VW + T   +  LP +HR+G+ ++AFS  G   A++G+D+D SL V+ +C G+W D  +QA     +    V F  F+ +DD   ++ITGGV  VKFW L  R  + R G+FGK+GK Q  + G  +   + V+G  SG LYVW+G  + + +  AH R +  ++    GG V+ G+DG V  WS ++  L  FDL    +A   P+      +   +D   +E  K+A  TAG+E+YE+S +SG+   L EGH   G+LWGLA HP+D D +ATAGDD S+RVWS++    LR+  V G  RALA+SP+G LL +G+            G   +    ++E+ F  +++R W++   FSPDG++ A+ S DN +Y+Y       +    +  +HN+ +   DF + S Y++S     ELL+   S+ + LP    ++L+  +WA  TC  GW VQG W    E D   + S+ RS +  LL TADD GNV++F YPV+ K+A + +  GH   ++ VRF ADDT++++ G  DR VL WK+
Sbjct:   84 EEEAPETFDPEEDDDEALGGFDLGQLGVEAAAEGD----EFQAVKPWLGALEPPSKPP--AQDPSAPRVRLELEAAHGARGA-LGRNALALNAANDPVWAAAGLGVILDRRGDRQAFFAGHD-DDVTALAVSRDGRYVVSGQQGKRPKVFVWSSETGKLISELPPYHRRGVQAVAFSPCGTMAASIGLDNDHSLCVYNTCLGDWSDGAIQAWSAVDKS--KVLFVTFTGNDD--FQIITGGVKTVKFWRLQSRNISCRKGIFGKIGKIQP-ITGCVMVGGKAVTGTASGALYVWEGNRVARAVEGAHARAVTCLNFADGGGFVSGGRDGRVVWWSPEVEQLAAFDLARLEDAPSDPV-----PVAVDID---AEQAKVAVGTAGAELYELSVDSGAGCRLGEGHGGRGELWGLAAHPSDPDQYATAGDDGSVRVWSVAGRGCLRRGRVSGEARALAYSPDGALLAVGL----------NTGGLEVLGAEDLEVRFRTKEAREWVQDVKFSPDGQTLAVGSHDNNIYLYSVKGGDQFDFYGRCSQHNSYITHFDFDKTSQYLRSNCGGYELLFFKVSSAEHLPGGA-SELRDAQWATETCVLGWAVQGIWPE--EADGTDINSVDRSKNGKLLATADDFGNVRIFNYPVVEKEAQFIVGKGHSSHVTNVRFNADDTYLLTTGGNDRTVLQWKL 741          
BLAST of mRNA_L-elsbetiae_contig706.15863.1 vs. uniprot
Match: A0A2R5G5S9_9STRA (Echinoderm microtubule-associated protein-like 1 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G5S9_9STRA)

HSP 1 Score: 444 bits (1143), Expect = 1.130e-129
Identity = 244/653 (37.37%), Postives = 369/653 (56.51%), Query Frame = 2
Query:  653 RPWIKNMVEPSYALDLGSDSTAPKQG--LSLASVRGIRSQGLTRGSLAYNRLGGLVYPAATIGVVYSRKTHSQRYFRGHGGKQISSLRVSPNGRFAASGEA--------GTRPTVRVWDAATSVELCSLPDHHRQGIASLAFSKDGRRLATVGVDSDKSLAVWRSCSGEWYDAELQATGKAGRGFGHVFFAEFSQSDDDELRVITGGVGHVKFWTLNGRLFNPRVGLFGKVGKRQTMLCGSAI----AAARFVSGGVSGHLYVWKGRWLEKTLRAHQRCIHSVHHTAGGLVTAGKDGFVKLWSTQLAHLKTFDLNEATVPPLLRGVRSICASLDMTGSEVIKIAAVTAGSEVYEISQESGSMTLLQEGHFSGQLWGLAVHPTDGDIFATAGDDHSIRVWSISLGVMLRKAFVDGTCRALAWSPNGRLLLIGMGGSIGGERTRKDGAFLLF-DVSNMEIVFEGRDSRSWIRACCFSPDGKSFAIASTDNKVYIYD-SMSYTLKAKAQKHNAPLVALDFSEDSNYVQSASDDNELLYHSAGDGLPFAVQAQLKHIKWAEYTCPFGWPVQGAWQPIAEEDAPTLTSLHRSHDKALLVTADDAGNVKLFRYPVLSKQAGYKLVSGHVGGISCVRFTADDTHIVSIGKGDRAVLIWKV 2563
            RPW+  +V P+ A     +     +G  L L  V G RS  + R +L YN +G +VY  A +G+VY +  H Q ++ GH G+ + SL + P+G+F A+GE         GT   V +W+A T   +  LP  H    + L FS DG RL +VG D + ++ VWRS SG W D  LQA  KA  G   + FA F  + +    + TGGV H+ FW LNG +  PR G+FG+ GK Q +LC + +    A+A+ V+G V+GHLYVW    + K+++AH R ++++H    GL T  KDG VKLW ++L+ ++TFD++E    P    VRS+C    + G+ ++     T GSE+YE++  + S  L+ +GH   +L GLA  P D +IFATAGDD ++R+W  S   M+ +  V    RA+ WSP+G  L IG+GG++G  R +KDG  ++      ++++ E RDS+ WI    +SPDG++ A+AS DNK+Y+YD + +Y L+AK + HN+ ++ +DFSEDS Y++S     +LL+H   DG      + LK IKWA  TC   W VQG W  +   D+    +   S +  L+   DD G + +F YP ++K +       HV  +   +F     ++ + G  DR +  W+V
Sbjct: 1676 RPWLSAVVPPTGAPSASENGDEAPKGVELELDFVYGHRSHDV-RNNLRYNCIGQIVYFGAAVGIVYDKARHEQAFYMGHDGRPMISLAMHPSGKFVATGEGSCTNRRRPGTAVRVHIWNAMTGAAVMKLPALHSTAASQLCFSADGSRLISVGEDENHTIMVWRSDSGTWTDTNLQA--KAMGGQQKILFALFYGASE----LATGGVNHLTFWKLNGGVLTPRRGIFGRKGKVQPLLCAATLEGVGASAKIVTGSVTGHLYVWSDGEVIKSVKAHDRTVNAIHACNLGLATGSKDGVVKLWDSKLSPIRTFDMSEVLPTPHRPPVRSVCWD-SVRGTVLVG----TQGSEIYELTTANQSAVLISQGHAMDELHGLAPSPKDPNIFATAGDDQTVRLWDASKRRMIGERNVGCMTRAVCWSPDGATLGIGLGGTVGRGRQKKDGVVMVLRGTEALDLLHETRDSKEWIADAKYSPDGETLAVASYDNKIYMYDVNKNYELRAKCEGHNSFVLHIDFSEDSEYIRSNCGGYDLLFHKVEDGSVVNSPSMLKDIKWATTTCSLCWSVQGIWPEVT--DSTVYNACDASPEAKLVAATDDLGFLNIFSYPAITKGSHALRYRAHVSQVMNTKFNKTCEYVFTAGGPDRILCQWRV 2314          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig706.15863.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LE32_ECTSI0.000e+087.12Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5J7H9_9PHAE0.000e+090.06Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6U4DXH9_9STRA1.780e-18543.55Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S3JVR1_9STRA9.790e-16643.59Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A8J2SIX3_9STRA2.810e-15641.33Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A482RZ87_9ARCH1.960e-14838.51HELP domain-containing protein n=1 Tax=archaeon Ta... [more]
A0A7S2PDC6_9STRA1.070e-14739.03Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7S2W8N2_9STRA5.570e-14537.59Hypothetical protein (Fragment) n=1 Tax=labyrinthu... [more]
A0A7S3UW80_HETAK1.650e-13036.42Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A2R5G5S9_9STRA1.130e-12937.37Echinoderm microtubule-associated protein-like 1 n... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig706contigL-elsbetiae_contig706:2340..10995 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score1265.8
Seed ortholog evalue0.0
Seed eggNOG ortholog2880.D8LE32
KEGG koko:K18595,ko:K18598
Hectar predicted targeting categoryother localisation
EggNOG free text desc.microtubule binding
EggNOG OGsCOG2319@1,KOG2106@2759
Ec32 ortholog descriptionWD40 repeat protein
Ec32 orthologEc-05_004250.1
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04812
Exons15
Model size3014
Cds size2175
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816783.624779-UTR-L-elsbetiae_contig706:2339..27331622816783.624779-UTR-L-elsbetiae_contig706:2339..2733Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig706 2340..2733 +
1691683810.2723756-UTR-L-elsbetiae_contig706:2339..27331691683810.2723756-UTR-L-elsbetiae_contig706:2339..2733Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig706 2340..2733 +
1622816783.8278408-UTR-L-elsbetiae_contig706:10550..109951622816783.8278408-UTR-L-elsbetiae_contig706:10550..10995Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig706 10551..10995 +
1691683810.464096-UTR-L-elsbetiae_contig706:10550..109951691683810.464096-UTR-L-elsbetiae_contig706:10550..10995Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig706 10551..10995 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816783.6358714-CDS-L-elsbetiae_contig706:2733..30091622816783.6358714-CDS-L-elsbetiae_contig706:2733..3009Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig706 2734..3009 +
1691683810.283798-CDS-L-elsbetiae_contig706:2733..30091691683810.283798-CDS-L-elsbetiae_contig706:2733..3009Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig706 2734..3009 +
1622816783.6461015-CDS-L-elsbetiae_contig706:3471..36621622816783.6461015-CDS-L-elsbetiae_contig706:3471..3662Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig706 3472..3662 +
1691683810.294806-CDS-L-elsbetiae_contig706:3471..36621691683810.294806-CDS-L-elsbetiae_contig706:3471..3662Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig706 3472..3662 +
1622816783.6557996-CDS-L-elsbetiae_contig706:3823..39591622816783.6557996-CDS-L-elsbetiae_contig706:3823..3959Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig706 3824..3959 +
1691683810.3157127-CDS-L-elsbetiae_contig706:3823..39591691683810.3157127-CDS-L-elsbetiae_contig706:3823..3959Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig706 3824..3959 +
1622816783.6721146-CDS-L-elsbetiae_contig706:4384..45371622816783.6721146-CDS-L-elsbetiae_contig706:4384..4537Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig706 4385..4537 +
1691683810.3306694-CDS-L-elsbetiae_contig706:4384..45371691683810.3306694-CDS-L-elsbetiae_contig706:4384..4537Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig706 4385..4537 +
1622816783.6882744-CDS-L-elsbetiae_contig706:4715..48431622816783.6882744-CDS-L-elsbetiae_contig706:4715..4843Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig706 4716..4843 +
1691683810.3431435-CDS-L-elsbetiae_contig706:4715..48431691683810.3431435-CDS-L-elsbetiae_contig706:4715..4843Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig706 4716..4843 +
1622816783.7029686-CDS-L-elsbetiae_contig706:5214..53461622816783.7029686-CDS-L-elsbetiae_contig706:5214..5346Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig706 5215..5346 +
1691683810.3593447-CDS-L-elsbetiae_contig706:5214..53461691683810.3593447-CDS-L-elsbetiae_contig706:5214..5346Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig706 5215..5346 +
1622816783.7173426-CDS-L-elsbetiae_contig706:5515..56631622816783.7173426-CDS-L-elsbetiae_contig706:5515..5663Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig706 5516..5663 +
1691683810.36967-CDS-L-elsbetiae_contig706:5515..56631691683810.36967-CDS-L-elsbetiae_contig706:5515..5663Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig706 5516..5663 +
1622816783.7286313-CDS-L-elsbetiae_contig706:5980..61301622816783.7286313-CDS-L-elsbetiae_contig706:5980..6130Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig706 5981..6130 +
1691683810.3794172-CDS-L-elsbetiae_contig706:5980..61301691683810.3794172-CDS-L-elsbetiae_contig706:5980..6130Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig706 5981..6130 +
1622816783.7415617-CDS-L-elsbetiae_contig706:6471..66501622816783.7415617-CDS-L-elsbetiae_contig706:6471..6650Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig706 6472..6650 +
1691683810.3894684-CDS-L-elsbetiae_contig706:6471..66501691683810.3894684-CDS-L-elsbetiae_contig706:6471..6650Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig706 6472..6650 +
1622816783.754368-CDS-L-elsbetiae_contig706:7075..71361622816783.754368-CDS-L-elsbetiae_contig706:7075..7136Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig706 7076..7136 +
1691683810.399457-CDS-L-elsbetiae_contig706:7075..71361691683810.399457-CDS-L-elsbetiae_contig706:7075..7136Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig706 7076..7136 +
1622816783.7688036-CDS-L-elsbetiae_contig706:7536..77041622816783.7688036-CDS-L-elsbetiae_contig706:7536..7704Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig706 7537..7704 +
1691683810.4143527-CDS-L-elsbetiae_contig706:7536..77041691683810.4143527-CDS-L-elsbetiae_contig706:7536..7704Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig706 7537..7704 +
1622816783.7816074-CDS-L-elsbetiae_contig706:8998..90921622816783.7816074-CDS-L-elsbetiae_contig706:8998..9092Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig706 8999..9092 +
1691683810.42409-CDS-L-elsbetiae_contig706:8998..90921691683810.42409-CDS-L-elsbetiae_contig706:8998..9092Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig706 8999..9092 +
1622816783.7919133-CDS-L-elsbetiae_contig706:9557..97081622816783.7919133-CDS-L-elsbetiae_contig706:9557..9708Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig706 9558..9708 +
1691683810.4335659-CDS-L-elsbetiae_contig706:9557..97081691683810.4335659-CDS-L-elsbetiae_contig706:9557..9708Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig706 9558..9708 +
1622816783.803866-CDS-L-elsbetiae_contig706:9853..99351622816783.803866-CDS-L-elsbetiae_contig706:9853..9935Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig706 9854..9935 +
1691683810.4452922-CDS-L-elsbetiae_contig706:9853..99351691683810.4452922-CDS-L-elsbetiae_contig706:9853..9935Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig706 9854..9935 +
1622816783.8164039-CDS-L-elsbetiae_contig706:10424..105501622816783.8164039-CDS-L-elsbetiae_contig706:10424..10550Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig706 10425..10550 +
1691683810.4547315-CDS-L-elsbetiae_contig706:10424..105501691683810.4547315-CDS-L-elsbetiae_contig706:10424..10550Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig706 10425..10550 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig706.15863.1prot_L-elsbetiae_contig706.15863.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig706 2734..10550 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig706.15863.1

>prot_L-elsbetiae_contig706.15863.1 ID=prot_L-elsbetiae_contig706.15863.1|Name=mRNA_L-elsbetiae_contig706.15863.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=725bp
MGSYAFMITPQLPSIRPNAAVASAAAEGMDAPKANVDDAGSSSVVAEQGV
PEDSDADPEADALVIGQQGLLSGSTEDGATKDKNADRPWIKNMVEPSYAL
DLGSDSTAPKQGLSLASVRGIRSQGLTRGSLAYNRLGGLVYPAATIGVVY
SRKTHSQRYFRGHGGKQISSLRVSPNGRFAASGEAGTRPTVRVWDAATSV
ELCSLPDHHRQGIASLAFSKDGRRLATVGVDSDKSLAVWRSCSGEWYDAE
LQATGKAGRGFGHVFFAEFSQSDDDELRVITGGVGHVKFWTLNGRLFNPR
VGLFGKVGKRQTMLCGSAIAAARFVSGGVSGHLYVWKGRWLEKTLRAHQR
CIHSVHHTAGGLVTAGKDGFVKLWSTQLAHLKTFDLNEATVPPLLRGVRS
ICASLDMTGSEVIKIAAVTAGSEVYEISQESGSMTLLQEGHFSGQLWGLA
VHPTDGDIFATAGDDHSIRVWSISLGVMLRKAFVDGTCRALAWSPNGRLL
LIGMGGSIGGERTRKDGAFLLFDVSNMEIVFEGRDSRSWIRACCFSPDGK
SFAIASTDNKVYIYDSMSYTLKAKAQKHNAPLVALDFSEDSNYVQSASDD
NELLYHSAGDGLPFAVQAQLKHIKWAEYTCPFGWPVQGAWQPIAEEDAPT
LTSLHRSHDKALLVTADDAGNVKLFRYPVLSKQAGYKLVSGHVGGISCVR
FTADDTHIVSIGKGDRAVLIWKVD*
back to top

mRNA from alignment at L-elsbetiae_contig706:2340..10995+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig706.15863.1 ID=mRNA_L-elsbetiae_contig706.15863.1|Name=mRNA_L-elsbetiae_contig706.15863.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=8656bp|location=Sequence derived from alignment at L-elsbetiae_contig706:2340..10995+ (Laminarionema elsbetiae ELsaHSoW15)
CTCGTCAACGGTGAAGTTGGAGTGTGTGTACTCACGAACTGTTCAGTTTT TTTAGCTTTCTAAGCCAAAGTCGCAAAGTAATCATCCCCGCTGGGAGCCG TACACACTCCGGACCTTGCTGCAGGTATATAGGTTCACGAGGAAACACCA CTAGACCACCAAGGAGAACGGGTACGGTTAAGTTCAACCAAAGCTTACTT GAAAGTTCATCGCGTCCGTTAACTGTAGATCTGCGACAAACAAATGACCA TCAACTGCGAAACGTGTTGGCATGCACAAACCCACCTATGCTTGTGATGC GTGATGTATATTTTGCACCCGTACTCTCATCTTGCACCGTTCCCTCTCTC GCTGTGTTGCTTGCCGTCGACTCTTGATTGTCAATCCATTCAAAATGGGC TCCTATGCTTTTATGATCACACCACAATTGCCCTCCATAAGGCCCAACGC CGCAGTTGCAAGTGCAGCAGCCGAAGGCATGGACGCACCAAAAGCAAATG TCGACGATGCTGGGAGCTCCTCAGTTGTAGCAGAACAGGGTGTACCGGAA GACAGTGATGCTGATCCCGAGGCGGACGCTTTGGTTATCGGGCAGCAAGG GCTACTCTCGGGTAGTACGGAAGATGGAGCAACGAAAGACAAGAACGCGG ACCGGCCGTGGATCAAAAACGTGAGAAAGAACCGCTGCTGCTGTCGCGAG AAAGAAAAGACGTTACAAGAGGGCACTTTTTCTGGTCCTCAGCCATCTAT GCGCTAGGCTTGCGTACGCACGCTCGCTGCAATTATTGTTCTATGCAGAA GTTGTTTCCCTTGCGCTGCTGGTGCATTGGTTATTTTTTCCCACAAGATT CTAGAGGCCTCTCGAACTCCTGGGTGTGCCCCAGAAACTAGAAAGTATCA TTGGTCGAGATAAATTAAGACCTGTGTTGATCCGGTTGAACGGTTTTATA TGTTTGTCTGTGTTCAACGTTCTCATGACTCTTGTGTTGCTCGGAACGAA GTACACCAACCCGACTAACATGTACCGTGTTTTATATTACCTGCCTTGGC AATTTTGTTACGCGAACGTAGAATTTCTAACATTGATCTCGGTGTCAACT TCCCATTTTCGCTCTTCGTGTGCCTCACGCAGATGGTCGAGCCTTCGTAC GCGCTGGATTTAGGAAGTGATAGTACTGCACCCAAACAAGGCCTATCGCT TGCATCCGTCCGAGGAATTCGAAGTCAGGGATTGACGCGAGGAAGCCTCG CCTACAACAGGCTGGGGGGACTTGTGTATCCAGCGGCTACCATCGGTGTT GTGTACAGCCGTAAAACACACAGGTAAACCAGAGAGGGTCCTTAGCGAAC TAAAGCCAATCGTCCATGTTGAACAGCTAGCTTCCTTGGCCTCTTTTTTG TCTTTTTGATATGTTCATAGTTTTTCCGTCTAAATCTACAAGTTACTAAC GTGCGAGCCTCCTCTTTCTACCTACCCTAAACAGCCAACGATATTTTCGC GGACACGGCGGGAAACAAATCAGTTCCCTGCGCGTTAGCCCAAACGGGCG GTTCGCGGCATCGGGCGAAGCGGGGACAAGACCGACCGTGCGTGTGTGGG ACGCAGCCACAAGCGTCGAGGTAATACACACTAGTTAACTTTCAGGTTTC CCGTCTTGCATGGACAACCAATGTTGTACCTTTCTCCGTCGTTTCATGCA AACCGCAAGAACAACCACAAGGGCAGCCATGCGATGGTTTGAGAAGTTGT TCCACGTATTTCTTGTTTGCCTGAGAAGGTTTCGGCGTTCTTACCTGCAA CGATGCTTTTCGGGGTCAATTTTTATGCGATTTGTAGATTGACAACGAAA ATACTCGCCTCGGAGGTGATACTCCCCCTGATCAAGTGAACGTCAATGCC AATCAGACTCAATAACGAGGTGTTTCGACTAGTGCGAGAGACGCCGAATC AATTCGAAAGTTGTCCCGTGAACCTACCGCTGTTTGAAGAAGTATGCGAC CCCATCCACCACCGCCGCACGCTCCCTGGTGTTGATTTGTGGCAGTTGTG CTCGCTCCCGGACCACCACCGCCAAGGAATTGCGAGTCTAGCGTTTTCGA AGGATGGCCGAAGGCTAGCCACGGTAGGAGTGGACTCTGACAAATCTCTC GCCGTATGGCGGTCTTGCTCTGGTGAATGGTACGACGCCGAGCTTCAGGT GACTGGTCTATTCCCGCTTCATTCCCGGTACAAGCGCTCGTACGTATCAA CGTACAGTTGTTTTCCTCGACTGTTGTACGTGAGTCAAGTGAGATAACAA TTCTCGCTAAATGGACACGCTGACGTATAGAGTGCATTGCCTTTCTCCAC ACGTGCCCAAATCCGCGCTTTGACAGGCAACAGGGAAAGCGGGGCGAGGT TTTGGCCATGTTTTCTTCGCCGAGTTCTCCCAGTCGGACGACGATGAGCT CCGCGTTATAACAGGGGGGGTTGGTCACGTCAAGTTCTGGACCCTGAACG GAAGGCAAGCAAGAACAGTGTGTACACACAAGCGGTTGGGTAGTTAATTC TAGTCAGGTGTGCTTAACCTAGTCCAATTTTGTTGAAGTAAAAAGCCCTT TGCCCACCACTGCTTCTAATGCAGGCTTCTGTTTTTCACATATCGATGTG AACAACTAACATCAAGTTATTTTGTCGGGGCTCACCAATAAGGTTGTTAT GTACTTCTACAAAGTAGAGCGAGCTAAAACAATGTACCGGACCATTCGGC TACTTGATACCAGTACGCATGCCACGCACGCCACGCTTACCCCGTGCCCC CCCAAAGAAGCCATCACCTGCTATTCATGTCTCGGGCCTCGTATCAAAAG TACTTCGATCATTTGGCTGTCGCAGGTTGTTCAACCCCAGAGTGGGTCTG TTTGGAAAGGTGGGCAAGCGGCAGACGATGTTATGCGGGTCGGCTATTGC AGCGGCTCGGTTCGTCAGCGGTGGTGTAAGCGGCCACTTGTATGTGTGGA AGGGGAGGTAAGAGCGGATCCGCCTCTGTTCATGGCGCCGAAAGGAAAAT CTCTATGTATGTACGTACCACCAAGTTTGTGTTTTCGCAAAAAAGGTTTG CCCTATCTTTTTGAAGGCCATGGATACCCCGTCGATGTACATGTTGGCTC AATTTCGGTTCGCTGTGGATACCCAGGTGGCTTGAAAAGACTCTGCGTGC GCACCAAAGGTGCATACATTCAGTTCACCATACCGCGGGTGGGTTGGTCA CGGCCGGGAAGGATGGCTTCGTCAAGCTCTGGAGTACGCAATTGGCGCAC CTCAAGACATTTGACTTAAACGAGGTGACTAACGTCCAAGCAGCTCGTGT CTTCTACAAGTGTTTTTCGACCTCAGTTCGTCTCGTTCCGTGTGTCATGC TATCATGCATGATGTTAAAACGTGATGCTGCATGACTACCAGCCGTGATC GGCACTGTCAACAGGCAAATCATTAGTGAAACAATTGTAAAGCATATTCT TGTCTGTGTCCCAGTACATCGAAAGTCGAAAGTGGTGTAAAGCGTCTGCG ACGGAGATTAACTTCCATCTACGTACATATTTATATGTGGCCTGCTTTTT CGCACTCCTACCTTTCTACGGTCGCAACACCCCTCCCACAGGCGACAGTC CCACCCCTGCTTCGGGGCGTGCGATCTATCTGTGCATCTCTCGATATGAC CGGATCAGAGGTGATCAAGATCGCGGCGGTGACGGCTGGCTCTGAGGTAT ACGAGATAAGCCAGGAGAGCGGGTCCATGACGTTGTTACAGGTGTGGTCA CGAAGCTTGGTCTTGGACGCATTGACACTCAATTTTGCAATTTTGTTCTG AAGAGATTTTGGCACACTTCCTTTCCTAAATCGTCAACAAAATATGATGG AAGAAAGCGCTGAACTCACAATGAACGTTACGCTCAAGGAATAACTTGGC TATGGACAGCTTGGTATGGAGAGTCACCCCTTGGTATGGAGAGTCACCCC CCCCCCGCCCCCGTCCAGCGCAACAGCGCTACTCGGTAGTGTTGCGGCTT TGTGCTCGGCGAACCAAGTGTAGATACATAAAGCTTGAGCTATGTACATT TACATGCCAAGACTCGCGGGTGGGATGGACAGGAGGGCCACTTTTCCGGA CAGCTATGGGGGCTGGCAGTGCATCCTACAGACGGAGATATTTTCGCAAC GGCAGGGGACGACCACAGCATTAGAGTGTGGAGTATATCTTTGGGAGTCA TGCTGAGGAAAGCCTTCGTGGATGGGACCTGTCGAGCTCTGGCATGGTCA CCGAACGGCAGGTGAATAGGTTGGTTCTGAAGTGCATACGCGTTTTCTTC GCTGCACCAACTGCATAATATGAAACGAGAGATGGCGTCCCCACAAGCAC GGAAGTATGCCTGCTATCCGGCGAATGTGTATTTCTTTTCGATGCGTCTT CGCGCTTGCTTGAATCAATAAAAGGCATCCACAACTTTACTCATCGGTCA ATAAATGGAACCATATCTCCAGGGAAACTTGCAAAATGACCAGTTTGGTT ATGTATATCGCTAGTCGATGTTTCTGAAAGTTGAGTAGACACAACCTGAA GGGTTGGATGCCTGTGGGCATCAGCTACCGAACTCCTGGTATTTTTAAAT TCGAAAAATATGAATCTGCCCAACATCTCTCCTTCAACGAACCAACTCAC ATACCAATTTTCGTTGCGTTCGGATATTGAATTTAGGCTCCTTCTCATCG GGATGGGCGGTAGCATCGGCGGCGAACGCACACGAAAGGATGGCGCGGTA AGCATATTGAGCAGCCCATGCTCGTAATACAAAATCACGTCAGCCACAGC ACTCAAGTCCTCGGGTGAATCACAAGGATAGTTCTACGTGAAAGAATGAA AGCAGCCATTTGGTAGGCATCCAGTGGTGCATACTATGGAAAACAGTGTG CCAAAGAGAGGACCCCGGGTGGAGACATGGGTGAATGTGGTAACGATTTG TCTCTAGTTAATTTTAGTGGAGAACAAAACTGGCTTCCCGAATTTGTTAC ACGCGCTACATCTTCTATAGATACACTTCAAAGTATGCAAAGCATGCCGA CAATCAAACGCTACTGCTGTCGTGTTGGGTTTGTTTCTTAAACGGTTAAT AAAGTCTCGGTGCGTTTCTCCTTCGCCACCTGTTCGTTTCACGTCAGTTT TTGTTATTTGATGTGTCGAATATGGAGATTGTGTTCGAGGGGCGAGACTC TCGTTCATGGATCCGCGCATGCTGCTTCAGCCCCGACGGAAAGAGCTTCG CAATTGCGTCCACTGACAACAAAGTGTATATCTACGACTCCATGTCATAT ACTCTCAAGGCGAAGGTGATTAACTGCGGTTTCGTAGGAGTTTAGCATCA GCAATGCCTACTTGTTGCTGGTTGGGGCTCATTTCGGTTGATGGGCCCTT GTTTTAGTGCAGTCGCAAAATATTGGCCAGCGCGCAGCTTCGCGGTTTGT AAGTTGGAAACTCTAAAACAACCTGGCGAGGGCAATAGTTTTGAACTGAA TAATTACGGTAAACTAGATCGAACTAGATACTTCACGAAACCCAAGGGCT TTGGCATCTCTATGCATCTGAAATAACCTCAAAAACTCCTTGAGGCCTCC CGGGACAGTGAGCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC CCCCCCCCCCCCCTTTCTGCCTTCTGCTCCCTTGCGTTGCTCTCTCTTTC TTTTTTTCTGTCCTCTCTCNNNNNNNNNNCGAAACCCAAGGGTTTTGCAC TCTCTCTAAATCACAAAAAACCCCAAAAACCCCTTGGGGCCCCCCGGGAC ACGGGCCCCCCCCCCCCCCCCCCCCCGTCACGCTTTTCGGCCACTAGCGG TTTGTAGTTTACCCTCGGGGCGTCGTGTATTTTTACTCCCTTCTTGAGTT CTCCCCAGTGTCGTTTTGCCTTTTCACGTGTTTGTTCATCACAACGAAAC AAACTTTTTAGCACTCTTTGGGATGTTACGTTGTTTACATAAACGTTTCC GTCAAGTCAAACCCAACATCCAGCACCACGAAAAAGAACCTTGAAAGAAC TTCCGCCTTCTGTAGAGACGATTGCTGTATGCTTCCCGTATCGGGTTCCT ACAAAGCAAAAGACGAAAGAGGGCAGAGCCCAAAACAAAACACGGTCGCA TTGTTCTCGCACCCTTCACCCACCAATAAGAGTTGGCTTCAACGAAACAA CCAACGCCGGTCTCGGATACTTTCTTAGAGCGGACCCCTCCTCTTATTTG GGGTGGGAGATACAGCATGACTCCAACGGCTCAAAGATCCCCAGGTGCTG TCCTCCTCCCTTTTGCTCTTTGTATGTTGCTCGTAGATGCTGGCTAGGCT CGACATCGAGATCATTGAGAGAAAGGTTATCCATTCCCCGGGGGAATTAC TCCCAGATTGCGAGAAAACAAATCGTTATTCCTCTCCTGAGGTACCCCCG GGTGGACCTTACGAGGTTCTCGGTAAGCACTGGTTTCGGCCTGCATATTT TTGTCGAATTGGAGCAAACGGTTACTTTTGGGGGCAAATAGCAGCGTTCG TCATTTGATTATCCTCTTATACATCATACTCCCAACACTGCTGTGCGTTG AAAACCCAGGCCCAGAAGCACAACGCCCCGTTGGTGGCTCTGGACTTCAG CGAGGATTCTAACTACGTGCAGTCTGCATCCGATGACAACGAACTTCTCT ATCGTGGGTATCCGATGCTACCTCGCACATCTTGTATCTTGTATCTTGCT CCATTTTTTTAGGTGCTGCGTGATGCATGTGCGTTCACAGGGCGTGTTCA CTAACCCTTTATTGGTCTTGCGTACGTGGGGAGGTTCAACCGGGTCTCAC CTCTACGGTATGTGGTTATAGTATTTGATGGGCAGAAAAAAGTGCACCGT TGACTAACATTCTCCCCTCATACACGGCAAAAGGGGTTGGTTCAGTGTGG CGTATACGCGTGCGTCTGATACGTAATGTGCAAGAGTTGATGCAAACTAA CATGCCCCATCCAAAAGGGATACACCTGGTAGTACGTGGTTACTCCGAGT CGAACCCCTCCCGAGCATGTGAAACATTGCTGGCCCGAAACACGGGCGAG CACGTACATTTTGTACTCCAAAAGCCCAAGTCAGTATCGACGGATTCCGC CGTTTCCCTACCTTTCAGATAGCGCTGGTGACGGCTTGCCGTTCGCAGTA CAAGCCCAGCTGAAGCACATCAAATGGGCGGAGTATACTTGTCCCTTTGG CTGGCCTGTTCAGGGAGCCTGGCAGCCGATAGCCGAGGAAGATGCCCCGA CCTTGACCTCTCTTCACAGGTACGCGTTGGAGCGTTTGCTACCCACGAAC GTTTGCTACCAACGGCCCTTGCAGATGAATGCATAAAGGAGGGATTTCAT GTTTGGGCCTTCGCATACGAACGATGAGCGTTTCACAGCCCCGCGACTGA TACATTCCTCGCAGGTCGCACGACAAAGCCCTCCTGGTGACAGCAGATGA TGCTGGCAACGTCAAGTTGTTCAGATACCCTGTACTGTCCAAGCAGGTGA GACGACATTGGTTTTTATCATATATATATACCCAGCCAAACGTCTAACGA AAACCAATGGTGCGCAAGTAATATTTGGATAGTAGTTATGCTAGCACGTT ACTTTAGACGGCGATAAATCAAAACTGACTATATAGGGCAGTACCACTAA GCTCCGCCAACTTAGATGCCCGCTACGTGTATAATAACCAGTTGACGCTT TGAACAGCACTCGCATACATACAATGCGCGGGTATCACCTAGTTTTTTGC TTCATTCTCCTCCCGTGAATCGTGGTCTATGATTAACCTCCTCACTATCA GTCCATCACCACCCGGGCAAGAGCTTTGCTAGCTTTATGTACGATAGCAA TCCGGTTAACCAATCAAATCCCTGCAGCGTTGTAGTTAAATTCGGATGAT GCTCGAAAAGCACTTTTTTTTCAGGCAGAGAATGTCATCATTCTCAGCCC GCATATTCAACATGAATCGTTGCCTTTTATTGCAGGCCGGGTACAAGCTT GTCTCGGGACATGTCGGTGGGATCTCATGCGTTCGGTTCACTGCCGACGA CACGCACATCGTGTCCATCGGCAAAGGCGATAGGGCCGTTCTGATATGGA AGGTGGACTAGGCAATTTCGTCGTAAATCTAGAGGAAACACGTAATGGTG CCAGTAGTCAGGGGCGGTGAGTGAGGGTCAGTATGTCTACAACAGTCCCC CTGAAACGACTTTTTCGCAAATTAGACGTACTGCTATCTGTAGGCGGCTG ACGTTTCGTCGAGCAACTTGTAAAAAAGGAGCAGAATAAGCGGATGCATC TGTGTTTGGGCTTTCACGAAGGGAGACAAATTCGTATCGAAGCCGATGGT TATAAGAGCGGGGGGCTGGAGGGGTCGAATTCGTTTGTTGGGGGATTTCG AGTGTTGGAAACAAACTGTACACGGGTCACGAAGCTTGACGTCCCACCCT TTCGCTCGTAAATACAGCGGAATTTAGAAGCAGTGTCTTTCAATTATGTA TCAATGTATATCTTGTGACGCCAGATGTGGTATCAAAATGTATATCTATG CTTGCC
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig706:2340..10995+

>mRNA_L-elsbetiae_contig706.15863.1 ID=mRNA_L-elsbetiae_contig706.15863.1|Name=mRNA_L-elsbetiae_contig706.15863.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=4350bp|location=Sequence derived from alignment at L-elsbetiae_contig706:2340..10995+ (Laminarionema elsbetiae ELsaHSoW15)
ATGGGCTCCTATGCTTTTATGATCACACCACAATTGCCCTCCATAAGGCC
CAACGCCGCAGTTGCAAGTGCAGCAGCCGAAGGCATGGACGCACCAAAAG
CAAATGTCGACGATGCTGGGAGCTCCTCAGTTGTAGCAGAACAGGGTGTA
CCGGAAGACAGTGATGCTGATCCCGAGGCGGACGCTTTGGTTATCGGGCA
GCAAGGGCTACTCTCGGGTAGTACGGAAGATGGAGCAACGAAAGACAAGA
ACGCGGACCGGCCGTGGATCAAAAACATGGGCTCCTATGCTTTTATGATC
ACACCACAATTGCCCTCCATAAGGCCCAACGCCGCAGTTGCAAGTGCAGC
AGCCGAAGGCATGGACGCACCAAAAGCAAATGTCGACGATGCTGGGAGCT
CCTCAGTTGTAGCAGAACAGGGTGTACCGGAAGACAGTGATGCTGATCCC
GAGGCGGACGCTTTGGTTATCGGGCAGCAAGGGCTACTCTCGGGTAGTAC
GGAAGATGGAGCAACGAAAGACAAGAACGCGGACCGGCCGTGGATCAAAA
ACATGGTCGAGCCTTCGTACGCGCTGGATTTAGGAAGTGATAGTACTGCA
CCCAAACAAGGCCTATCGCTTGCATCCGTCCGAGGAATTCGAAGTCAGGG
ATTGACGCGAGGAAGCCTCGCCTACAACAGGCTGGGGGGACTTGTGTATC
CAGCGGCTACCATCGGTGTTGTGTACAGCCGTAAAACACACAGATGGTCG
AGCCTTCGTACGCGCTGGATTTAGGAAGTGATAGTACTGCACCCAAACAA
GGCCTATCGCTTGCATCCGTCCGAGGAATTCGAAGTCAGGGATTGACGCG
AGGAAGCCTCGCCTACAACAGGCTGGGGGGACTTGTGTATCCAGCGGCTA
CCATCGGTGTTGTGTACAGCCGTAAAACACACAGCCAACGATATTTTCGC
GGACACGGCGGGAAACAAATCAGTTCCCTGCGCGTTAGCCCAAACGGGCG
GTTCGCGGCATCGGGCGAAGCGGGGACAAGACCGACCGTGCGTGTGTGGG
ACGCAGCCACAAGCGTCGAGCCAACGATATTTTCGCGGACACGGCGGGAA
ACAAATCAGTTCCCTGCGCGTTAGCCCAAACGGGCGGTTCGCGGCATCGG
GCGAAGCGGGGACAAGACCGACCGTGCGTGTGTGGGACGCAGCCACAAGC
GTCGAGTTGTGCTCGCTCCCGGACCACCACCGCCAAGGAATTGCGAGTCT
AGCGTTTTCGAAGGATGGCCGAAGGCTAGCCACGGTAGGAGTGGACTCTG
ACAAATCTCTCGCCGTATGGCGGTCTTGCTCTGGTGAATGGTACGACGCC
GAGCTTCAGTTGTGCTCGCTCCCGGACCACCACCGCCAAGGAATTGCGAG
TCTAGCGTTTTCGAAGGATGGCCGAAGGCTAGCCACGGTAGGAGTGGACT
CTGACAAATCTCTCGCCGTATGGCGGTCTTGCTCTGGTGAATGGTACGAC
GCCGAGCTTCAGGCAACAGGGAAAGCGGGGCGAGGTTTTGGCCATGTTTT
CTTCGCCGAGTTCTCCCAGTCGGACGACGATGAGCTCCGCGTTATAACAG
GGGGGGTTGGTCACGTCAAGTTCTGGACCCTGAACGGAAGGCAACAGGGA
AAGCGGGGCGAGGTTTTGGCCATGTTTTCTTCGCCGAGTTCTCCCAGTCG
GACGACGATGAGCTCCGCGTTATAACAGGGGGGGTTGGTCACGTCAAGTT
CTGGACCCTGAACGGAAGGTTGTTCAACCCCAGAGTGGGTCTGTTTGGAA
AGGTGGGCAAGCGGCAGACGATGTTATGCGGGTCGGCTATTGCAGCGGCT
CGGTTCGTCAGCGGTGGTGTAAGCGGCCACTTGTATGTGTGGAAGGGGAG
GTTGTTCAACCCCAGAGTGGGTCTGTTTGGAAAGGTGGGCAAGCGGCAGA
CGATGTTATGCGGGTCGGCTATTGCAGCGGCTCGGTTCGTCAGCGGTGGT
GTAAGCGGCCACTTGTATGTGTGGAAGGGGAGGTGGCTTGAAAAGACTCT
GCGTGCGCACCAAAGGTGCATACATTCAGTTCACCATACCGCGGGTGGGT
TGGTCACGGCCGGGAAGGATGGCTTCGTCAAGCTCTGGAGTACGCAATTG
GCGCACCTCAAGACATTTGACTTAAACGAGGTGGCTTGAAAAGACTCTGC
GTGCGCACCAAAGGTGCATACATTCAGTTCACCATACCGCGGGTGGGTTG
GTCACGGCCGGGAAGGATGGCTTCGTCAAGCTCTGGAGTACGCAATTGGC
GCACCTCAAGACATTTGACTTAAACGAGGCGACAGTCCCACCCCTGCTTC
GGGGCGTGCGATCTATCTGTGCATCTCTCGATATGACCGGATCAGAGGTG
ATCAAGATCGCGGCGGTGACGGCTGGCTCTGAGGTATACGAGATAAGCCA
GGAGAGCGGGTCCATGACGTTGTTACAGGCGACAGTCCCACCCCTGCTTC
GGGGCGTGCGATCTATCTGTGCATCTCTCGATATGACCGGATCAGAGGTG
ATCAAGATCGCGGCGGTGACGGCTGGCTCTGAGGTATACGAGATAAGCCA
GGAGAGCGGGTCCATGACGTTGTTACAGGAGGGCCACTTTTCCGGACAGC
TATGGGGGCTGGCAGTGCATCCTACAGACGGAGATATTTTCGCAACGGCA
GGGGACGACCACAGCATTAGAGTGTGGAGTATATCTTTGGGAGTCATGCT
GAGGAAAGCCTTCGTGGATGGGACCTGTCGAGCTCTGGCATGGTCACCGA
ACGGCAGGAGGGCCACTTTTCCGGACAGCTATGGGGGCTGGCAGTGCATC
CTACAGACGGAGATATTTTCGCAACGGCAGGGGACGACCACAGCATTAGA
GTGTGGAGTATATCTTTGGGAGTCATGCTGAGGAAAGCCTTCGTGGATGG
GACCTGTCGAGCTCTGGCATGGTCACCGAACGGCAGGCTCCTTCTCATCG
GGATGGGCGGTAGCATCGGCGGCGAACGCACACGAAAGGATGGCGCGGCT
CCTTCTCATCGGGATGGGCGGTAGCATCGGCGGCGAACGCACACGAAAGG
ATGGCGCGTTTTTGTTATTTGATGTGTCGAATATGGAGATTGTGTTCGAG
GGGCGAGACTCTCGTTCATGGATCCGCGCATGCTGCTTCAGCCCCGACGG
AAAGAGCTTCGCAATTGCGTCCACTGACAACAAAGTGTATATCTACGACT
CCATGTCATATACTCTCAAGGCGAAGTTTTTGTTATTTGATGTGTCGAAT
ATGGAGATTGTGTTCGAGGGGCGAGACTCTCGTTCATGGATCCGCGCATG
CTGCTTCAGCCCCGACGGAAAGAGCTTCGCAATTGCGTCCACTGACAACA
AAGTGTATATCTACGACTCCATGTCATATACTCTCAAGGCGAAGGCCCAG
AAGCACAACGCCCCGTTGGTGGCTCTGGACTTCAGCGAGGATTCTAACTA
CGTGCAGTCTGCATCCGATGACAACGAACTTCTCTATCGCCCAGAAGCAC
AACGCCCCGTTGGTGGCTCTGGACTTCAGCGAGGATTCTAACTACGTGCA
GTCTGCATCCGATGACAACGAACTTCTCTATCATAGCGCTGGTGACGGCT
TGCCGTTCGCAGTACAAGCCCAGCTGAAGCACATCAAATGGGCGGAGTAT
ACTTGTCCCTTTGGCTGGCCTGTTCAGGGAGCCTGGCAGCCGATAGCCGA
GGAAGATGCCCCGACCTTGACCTCTCTTCACAGATAGCGCTGGTGACGGC
TTGCCGTTCGCAGTACAAGCCCAGCTGAAGCACATCAAATGGGCGGAGTA
TACTTGTCCCTTTGGCTGGCCTGTTCAGGGAGCCTGGCAGCCGATAGCCG
AGGAAGATGCCCCGACCTTGACCTCTCTTCACAGGTCGCACGACAAAGCC
CTCCTGGTGACAGCAGATGATGCTGGCAACGTCAAGTTGTTCAGATACCC
TGTACTGTCCAAGCAGGTCGCACGACAAAGCCCTCCTGGTGACAGCAGAT
GATGCTGGCAACGTCAAGTTGTTCAGATACCCTGTACTGTCCAAGCAGGC
CGGGTACAAGCTTGTCTCGGGACATGTCGGTGGGATCTCATGCGTTCGGT
TCACTGCCGACGACACGCACATCGTGTCCATCGGCAAAGGCGATAGGGCC
GTTCTGATATGGAAGGTGGACTAGGCCGGGTACAAGCTTGTCTCGGGACA
TGTCGGTGGGATCTCATGCGTTCGGTTCACTGCCGACGACACGCACATCG
TGTCCATCGGCAAAGGCGATAGGGCCGTTCTGATATGGAAGGTGGACTAG
back to top