mRNA_L-elsbetiae_contig7059.15862.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig7059.15862.1 vs. uniprot
Match: A0A6H5KN31_9PHAE (Sulfotransfer_1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN31_9PHAE) HSP 1 Score: 549 bits (1415), Expect = 4.440e-186 Identity = 246/293 (83.96%), Postives = 270/293 (92.15%), Query Frame = 3 Query: 15 GHDGFLQRVDPTPGAKWQLEMTESQDAEWLGLHQFDSRYEYGSEEADRRVKKLGYCRVHMPSVPRTGSTWFRAMFETATSQPSFAMWPEGGTFKKKYTAFSSDDPCGSSLDHMEGNLKSTRKSPCRDLRPPNATSPILYKSHTPFFPSYNKPSLMPEETCMLVLLVRNPIDNHDAWMRYMAGKGPILRDYLPIWQGHLSHWVASAGDIPIYVFRYEDMLLRAEEALRRILQTFPGGWNWSEESVAKAMRMFGPKKPFREKCGAGIPRSSLAEVEMVRRHYGSYMRHLGYRFVK 893 G D +L V P P A W+LEM+ESQDAEWLGLH FD+ YEYGSEEADRRV+K GYCRVHMPS+PRTGSTWFRA+FETATSQPSF+MWPEGGT K++YTAFSSDDPCG+SLDHMEGNL+S K PCRDLRPPNATSPILYKSHTPFFPSYNKPSLMPE+TCMLVLLVRNPIDNHDAW RYMAGK P LRDYLP+WQGHLSHWVA+AGDIPIYVFRYEDMLLRAEE LRRIL T PGGWNWSEES+A+AM +FGPKKPF++KCGAG+PR+SLAEVEMVRRHYG+YMRH GYRFV+ Sbjct: 133 GFDKYLHPVAPRPKAGWELEMSESQDAEWLGLHSFDNMYEYGSEEADRRVEKAGYCRVHMPSIPRTGSTWFRALFETATSQPSFSMWPEGGTLKERYTAFSSDDPCGASLDHMEGNLRSKAKFPCRDLRPPNATSPILYKSHTPFFPSYNKPSLMPEDTCMLVLLVRNPIDNHDAWQRYMAGKAPCLRDYLPVWQGHLSHWVAAAGDIPIYVFRYEDMLLRAEEVLRRILNTLPGGWNWSEESIARAMSLFGPKKPFKQKCGAGVPRASLAEVEMVRRHYGAYMRHFGYRFVE 425
BLAST of mRNA_L-elsbetiae_contig7059.15862.1 vs. uniprot
Match: D8LQP3_ECTSI (Sulfotransfer_1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQP3_ECTSI) HSP 1 Score: 531 bits (1369), Expect = 4.620e-179 Identity = 239/297 (80.47%), Postives = 267/297 (89.90%), Query Frame = 3 Query: 3 KDAIGHDGFLQRVDPTPGAKWQLEMTESQDAEWLGLHQFDSRYEYGSEEADRRVKKLGYCRVHMPSVPRTGSTWFRAMFETATSQPSFAMWPEGGTFKKKYTAFSSDDPCGSSLDHMEGNLKSTRKSPCRDLRPPNATSPILYKSHTPFFPSYNKPSLMPEETCMLVLLVRNPIDNHDAWMRYMAGKGPILRDYLPIWQGHLSHWVASAGDIPIYVFRYEDMLLRAEEALRRILQTFPGGWNWSEESVAKAMRMFGPKKPFREKCGAGIPRSSLAEVEMVRRHYGSYMRHLGYRFVK 893 K+ +GHD FL+RV P P AKW+L+MTE QDAEWLGLH FDSR+EYGS++AD RVKKLGYCRVHMPSVPRTGSTWFRAMFETATSQPSF+MW EGGTFK+ Y AFSSDDPCG+SLDHMEG L+S +K CRDLRPPNATSPILYKSHTPFFPSYNKPSLMPEETCMLVLLVRNPIDNHDAW RYM K ++R+YLP+WQGHLSHWVA+AGDIPIYVFRYEDMLLRAEE LRRIL PGGWNWSE+S+AKAMR+FGPK F +KCGAG+ + S+AEVEMVR HYG++MRHLGYRF+K Sbjct: 135 KNQLGHDEFLRRVPPNPQAKWELQMTEDQDAEWLGLHNFDSRFEYGSKKADERVKKLGYCRVHMPSVPRTGSTWFRAMFETATSQPSFSMWQEGGTFKEHYRAFSSDDPCGASLDHMEGRLQSQKKFACRDLRPPNATSPILYKSHTPFFPSYNKPSLMPEETCMLVLLVRNPIDNHDAWQRYMYKKSIVVREYLPLWQGHLSHWVAAAGDIPIYVFRYEDMLLRAEEVLRRILHALPGGWNWSEDSIAKAMRLFGPKTAFEDKCGAGVRQMSVAEVEMVRLHYGAFMRHLGYRFIK 431
BLAST of mRNA_L-elsbetiae_contig7059.15862.1 vs. uniprot
Match: A0A6H5KVH5_9PHAE (Sulfotransfer_1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVH5_9PHAE) HSP 1 Score: 462 bits (1189), Expect = 4.670e-152 Identity = 211/263 (80.23%), Postives = 236/263 (89.73%), Query Frame = 3 Query: 3 KDAIGHDGFLQRVDPTPGAKWQLEMTESQDAEWLGLHQFDSRYEYGSEEADRRVKKLGYCRVHMPSVPRTGSTWFRAMFETATSQPSFAMWPEGGTFKKKYTAFSSDDPCGSSLDHMEGNLKSTRKSPCRDLRPPNATSPILYKSHTPFFPSYNKPSLMPEETCMLVLLVRNPIDNHDAWMRYMAGKGPILRDYLPIWQGHLSHWVASAGDIPIYVFRYEDMLLRAEEALRRILQTFPGGWNWSEESVAKAMR-MFGPKKPFR 788 K+ +G+D FL+RV P P AKW+LEMTE+QDAEWLGLH FDSR++YGS++AD RVKKLGYCRVHMPSVPRTGSTWFRAMFETATSQPSF+MW EGGTFK+ Y AFSSDDPCG+SLDHMEG L+S +K CRDLRPPNATSPILYKSHTPFFPSYNKPSLMPEETCMLVLLVRNPIDNHDAW RYM K ++R+YLP+WQGHLSHWVA+AGDIPIYVFRYEDMLLRAEE LRRIL PGGWNWSE+S+AKAMR + P++ FR Sbjct: 135 KNQLGYDEFLKRVPPNPQAKWELEMTENQDAEWLGLHNFDSRFKYGSKKADERVKKLGYCRVHMPSVPRTGSTWFRAMFETATSQPSFSMWQEGGTFKENYRAFSSDDPCGASLDHMEGRLQSMKKFACRDLRPPNATSPILYKSHTPFFPSYNKPSLMPEETCMLVLLVRNPIDNHDAWQRYMYHKSIVVREYLPLWQGHLSHWVAAAGDIPIYVFRYEDMLLRAEEVLRRILHALPGGWNWSEDSIAKAMRQVVRPQESFR 397
BLAST of mRNA_L-elsbetiae_contig7059.15862.1 vs. uniprot
Match: D8LQP4_ECTSI (F-box domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQP4_ECTSI) HSP 1 Score: 468 bits (1203), Expect = 1.400e-145 Identity = 212/252 (84.13%), Postives = 228/252 (90.48%), Query Frame = 3 Query: 3 KDAIGHDGFLQRVDPTPGAKWQLEMTESQDAEWLGLHQFDSRYEYGSEEADRRVKKLGYCRVHMPSVPRTGSTWFRAMFETATSQPSFAMWPEGGTFKKKYTAFSSDDPCGSSLDHMEGNLKSTRKSPCRDLRPPNATSPILYKSHTPFFPSYNKPSLMPEETCMLVLLVRNPIDNHDAWMRYMAGKGPILRDYLPIWQGHLSHWVASAGDIPIYVFRYEDMLLRAEEALRRILQTFPGGWNWSEESVAKAM 758 +D G D FLQ V P P A W+LEM+ESQDAEWLGLH FD RYEYGSEEADRRV+K GYCRVHMPS+PRTGSTWFRA+FETATSQPSF+MWPEGGT K++Y AFSSDDPCG+SLDHMEGNL+S K PCRDLRPPNATSPILYKSHTPFFPSYNKPSLMPE+TCMLVLLVRNPIDNHDAW RYMAGK LRDYLP+WQGHLSHWVA+AGDIPIYVFRYEDMLLRAEE LRRIL T PGGWNWSEES+A+AM Sbjct: 864 QDKPGFDKFLQPVAPRPEAGWELEMSESQDAEWLGLHSFDDRYEYGSEEADRRVEKAGYCRVHMPSIPRTGSTWFRALFETATSQPSFSMWPEGGTLKERYNAFSSDDPCGASLDHMEGNLRSEAKFPCRDLRPPNATSPILYKSHTPFFPSYNKPSLMPEDTCMLVLLVRNPIDNHDAWQRYMAGKAQCLRDYLPVWQGHLSHWVAAAGDIPIYVFRYEDMLLRAEEVLRRILNTLPGGWNWSEESIARAM 1115
BLAST of mRNA_L-elsbetiae_contig7059.15862.1 vs. uniprot
Match: A0A835YVS2_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVS2_9STRA) HSP 1 Score: 330 bits (847), Expect = 4.230e-103 Identity = 147/290 (50.69%), Postives = 195/290 (67.24%), Query Frame = 3 Query: 18 HDGFLQRVDPTPGAKWQLEMTESQDAEWLGLHQFDSRYEYGSEEADRRVKKLGYCRVHMPSVPRTGSTWFRAMFETATSQPSFAMWPEGGT--FKKKYTAFSSDDPCGSSLDHMEGNLKSTRKSPCRDLRPPNATSPILYKSHTPFFPSYNKPSLMPEETCMLVLLVRNPIDNHDAWMRYMAGKGPILRDYLPIWQGHLSHWVASAGDIPIYVFRYEDMLLRAEEALRRILQTFPGGWNWSEESVAKAMRMFGPKKPFREKCGAGIPRSSLAEVEMVRRHYGSYMRHLGY 881 +D L V PTPGA W+L +++S + WLG+ D RY YGS+ AD+R + GYCRVHMPS+PR GSTWFR MFE AT +P+ ++WPEGG ++Y CG++ MEGN PCR+L P P+L KSHTPFFPSY++P+L P TC ++L+VRNP+D HDAW RY G LR +LP+W GHL+HWVA D+PI FRYED+L RA++ L ++L+ GW WS ES+ +A+R +GP++PF +KCG IP +LAEVEMVR+HY + GY Sbjct: 2 YDKALPPVKPTPGAAWRLTVSDSMEGNWLGVRNLDRRYVYGSKLADQRYRANGYCRVHMPSIPRAGSTWFRTMFEVATGRPTASVWPEGGRQDAARRYHIVDGH-ACGANPAQMEGNKLPRGAPPCRNLTAPAPDDPVLMKSHTPFFPSYDRPALDPGATCAVLLIVRNPLDAHDAWRRYAGGTAEPLRKWLPVWAGHLTHWVADTRDLPIIAFRYEDLLWRADKVLEQVLRALGPGWEWSRESIERAVRTYGPREPFEDKCGKAIPHYTLAEVEMVRKHYAGLLGRFGY 290
BLAST of mRNA_L-elsbetiae_contig7059.15862.1 vs. uniprot
Match: A9VD83_MONBE (Predicted protein n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9VD83_MONBE) HSP 1 Score: 63.2 bits (152), Expect = 1.110e-6 Identity = 55/217 (25.35%), Postives = 99/217 (45.62%), Query Frame = 3 Query: 183 RVHMPSVPRTGSTWFRAMFETATSQPSFAMWPE------GGTFKKKYTAFSSDDPCGSSLDHMEGNLKSTRKSPCRDLRPPNATSPILYKSHTPFFPSY------NKPSLMPEETCML-VLLVRNPIDNHDAWMRYMAGKG--------PILRDYLPIWQGHLSHWVASA--GDIPIYVFRYEDMLL--RAEEALRRILQTFPGGWNWSEESVAKAM 758 R+ M S+PR+G++W R M E T + + ++PE G ++ T ++ H G++ C ++P + I+ K+H+PF ++ + +L + +L VRNP+DN DAW R++ GKG P+ R ++ W G W + P Y+FR+ED+ + ++ P G + + +AK+M Sbjct: 101 RIVMASIPRSGNSWSRDMIELVTKRATETVFPETFRAFEDGPNSERETYSATWSEASDLYRHECGHVHD-----CSHIKP--GSDFIVAKTHSPFILTHGGAAGTHGTNLSDAGVGVFNILPVRNPLDNWDAWHRWLVGKGRNEQLAEWPLDR-FVEHWLGFHRLWQDTLPYSAQPRYIFRFEDLASDDKRVRLFHGLVNVLPYGNRKAGDEMAKSM 309 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7059.15862.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 6
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig7059.15862.1 >prot_L-elsbetiae_contig7059.15862.1 ID=prot_L-elsbetiae_contig7059.15862.1|Name=mRNA_L-elsbetiae_contig7059.15862.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=277bp MTESQDAEWLGLHQFDSRYEYGSEEADRRVKKLGYCRVHMPSVPRTGSTWback to top mRNA from alignment at L-elsbetiae_contig7059:1472..8928- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig7059.15862.1 ID=mRNA_L-elsbetiae_contig7059.15862.1|Name=mRNA_L-elsbetiae_contig7059.15862.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=7457bp|location=Sequence derived from alignment at L-elsbetiae_contig7059:1472..8928- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig7059:1472..8928- >mRNA_L-elsbetiae_contig7059.15862.1 ID=mRNA_L-elsbetiae_contig7059.15862.1|Name=mRNA_L-elsbetiae_contig7059.15862.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1662bp|location=Sequence derived from alignment at L-elsbetiae_contig7059:1472..8928- (Laminarionema elsbetiae ELsaHSoW15)back to top |