prot_L-elsbetiae_contig7050.15852.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig7050.15852.1
Unique Nameprot_L-elsbetiae_contig7050.15852.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length484
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig7050.15852.1 vs. uniprot
Match: D7FZ51_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ51_ECTSI)

HSP 1 Score: 116 bits (290), Expect = 1.480e-24
Identity = 180/502 (35.86%), Postives = 210/502 (41.83%), Query Frame = 0 
Query:    1 PDNWDEDTRFDGPEHWGMDQRWKSLFPKSGVRA-------DGSSDSSGGRSNTDSEESDSDGAIRAKDTVDISKDDXXXXXXGHDDGFSPRSSEGDSHDATSLRIG-VARTKIPETAPVPADRERQRRISPSNRPSKSTIVMNRSKGRTA-----------EAQATSRRWRHGTKDTEPASSSRSGTPLRMSRDAYSYLSSEGEEEFDESEANITGHERNSSLTTATATTTPRRRIERKDGGRVTGESPPSAEYRGSSGSKEKIRGRTERDTCAEAGRA-ALPLACDDSSDGSVGSPSGGVGDDDIESSGSESEDGGALNYASSAAXXSGNEGYHAGGQDASGGGKRGIKGSKRRSVSSPSPSHTSGRGKEKRPTQQKGGVLREGGRRGKERESRXXXXXXXXXXXXXXXXXXXXXXXXXXXXHAGGGAGKSKKVRKIVPAKGDEHGWISKDSGGXXXXXXXXXXARGRSNPVSSFQGPQASARKNQERSLTQSKINFPVVL 482
            PDNW EDTRFDGPEHWG+++RWKSLFPK+G +        D S D  GGRS             RAK T + + D       G DD  +     GD H A   +    AR  +PETAP   D E + RI    RP+  T   + S   T+           E     RRWR   + TEPASSSR+G+  R S    S         FDESEANITGHERN+S            R                                  R  C+      A P   D        SPS    +++IESSGSES  GG  N     +   G+EG    G+  S                                   KG V+R            XXXXXXXX                     A      SKK RK+V A+G+EHGWI+K  GG XXXXXX    R   NPV SFQG Q S RKN ERSLTQSKINFPVVL
Sbjct:    7 PDNWQEDTRFDGPEHWGIEKRWKSLFPKTGFKTKSVGGIVDTSRDKDGGRS-------------RAKGTRNATVD---MTAEGGDDTVTCSLQSGDDHFANFNQPSRAARRTVPETAPE--DPEEEMRIPSYRRPNAKTTATSGSSINTSSIGKAPLYEDEEPTTGQRRWRIQPRSTEPASSSRAGSRARDSVLLPSSSEXXXXXXFDESEANITGHERNNS------------RXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXR--CSPGXXXXAFPYGDD--------SPSRQRREEEIESSGSESC-GGLSN-----SDFDGSEGE---GRKPSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKGRVVR---------XXXXXXXXXXXHSRMGNNTSSSPIPGSAQGARARSAPSGSKKARKVVRAQGNEHGWIAK-GGGSXXXXXXGGRVR---NPVLSFQGSQISMRKNNERSLTQSKINFPVVL 446
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7050.15852.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FZ51_ECTSI1.480e-2435.86Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7050contigL-elsbetiae_contig7050:470..3698 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7050.15852.1mRNA_L-elsbetiae_contig7050.15852.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig7050 470..3698 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig7050.15852.1 ID=prot_L-elsbetiae_contig7050.15852.1|Name=mRNA_L-elsbetiae_contig7050.15852.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=484bp
PDNWDEDTRFDGPEHWGMDQRWKSLFPKSGVRADGSSDSSGGRSNTDSEE
SDSDGAIRAKDTVDISKDDDDDDEDGHDDGFSPRSSEGDSHDATSLRIGV
ARTKIPETAPVPADRERQRRISPSNRPSKSTIVMNRSKGRTAEAQATSRR
WRHGTKDTEPASSSRSGTPLRMSRDAYSYLSSEGEEEFDESEANITGHER
NSSLTTATATTTPRRRIERKDGGRVTGESPPSAEYRGSSGSKEKIRGRTE
RDTCAEAGRAALPLACDDSSDGSVGSPSGGVGDDDIESSGSESEDGGALN
YASSAAGGSGNEGYHAGGQDASGGGKRGIKGSKRRSVSSPSPSHTSGRGK
EKRPTQQKGGVLREGGRRGKERESRHSSSKQKSKGSKASSSSSTPSASGE
KGRHAGGGAGKSKKVRKIVPAKGDEHGWISKDSGGGGGSGGGGGGARGRS
NPVSSFQGPQASARKNQERSLTQSKINFPVVLD*
back to top