mRNA_L-elsbetiae_contig705.15849.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig705.15849.1 vs. uniprot
Match: D7G0Q5_ECTSI (Hypothetical leucine rich repeat calcium binding protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0Q5_ECTSI) HSP 1 Score: 160 bits (404), Expect = 7.120e-44 Identity = 75/78 (96.15%), Postives = 77/78 (98.72%), Query Frame = 1 Query: 1 ASNFVKHMKTNKTLTYLDLSHNLIGSQESINYVRPEFYTGAEALADWISTGSCPLKYLDISWNTIRLDSAVYFGNAVA 234 ASNFVKHMK NKTLTYLDLSHNLIGSQESINYVRPEFYTGAEALADW+STGSCPLKYLD+SWNTIRLDSAVYFGNAVA Sbjct: 620 ASNFVKHMKANKTLTYLDLSHNLIGSQESINYVRPEFYTGAEALADWVSTGSCPLKYLDVSWNTIRLDSAVYFGNAVA 697
BLAST of mRNA_L-elsbetiae_contig705.15849.1 vs. uniprot
Match: A0A6H5J9E0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9E0_9PHAE) HSP 1 Score: 137 bits (345), Expect = 1.830e-40 Identity = 68/83 (81.93%), Postives = 70/83 (84.34%), Query Frame = 1 Query: 22 MKTNKTLTYLDLSHNLIGSQ------------ESINYVRPEFYTGAEALADWISTGSCPLKYLDISWNTIRLDSAVYFGNAVA 234 MK NKTLTYLDLSHNLIGSQ ESINYVRPEFYTGAEALADW+STGSCPLKYLD+SWNTIRLDSAVYFGNAVA Sbjct: 1 MKANKTLTYLDLSHNLIGSQVLIRHVPVDFVQESINYVRPEFYTGAEALADWVSTGSCPLKYLDVSWNTIRLDSAVYFGNAVA 83
BLAST of mRNA_L-elsbetiae_contig705.15849.1 vs. uniprot
Match: A0A835Z3V7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3V7_9STRA) HSP 1 Score: 110 bits (274), Expect = 1.880e-27 Identity = 50/78 (64.10%), Postives = 63/78 (80.77%), Query Frame = 1 Query: 1 ASNFVKHMKTNKTLTYLDLSHNLIGSQESINYVRPEFYTGAEALADWISTGSCPLKYLDISWNTIRLDSAVYFGNAVA 234 AS FV+ ++ N +LT+LDLS NLIG QES+NYV P FYTGAEALADW++ C L++LD+SWNTIRL SA+ FG A+A Sbjct: 108 ASKFVEQLRHNTSLTHLDLSRNLIGKQESVNYVNPAFYTGAEALADWLAMPQCRLRHLDVSWNTIRLGSAISFGEALA 185
BLAST of mRNA_L-elsbetiae_contig705.15849.1 vs. uniprot
Match: A0A7S3UU35_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UU35_HETAK) HSP 1 Score: 78.2 bits (191), Expect = 4.080e-15 Identity = 37/76 (48.68%), Postives = 54/76 (71.05%), Query Frame = 1 Query: 7 NFVKHMKTNKTLTYLDLSHNLIGSQESINYVRPEFYTGAEALADWISTGSCPLKYLDISWNTIRLDSAVYFGNAVA 234 N + + N+ LT LDLSHNLIG+ E +N V+P++ TG EA+A+ + +C L+ L++SWN IRL+SAV G A+A Sbjct: 36 NLLDALAHNRNLTSLDLSHNLIGTNEVMNVVQPDYTTGGEAVAESLEHPNCKLRALNLSWNLIRLESAVALGEALA 111
BLAST of mRNA_L-elsbetiae_contig705.15849.1 vs. uniprot
Match: A0A7S3UU41_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UU41_HETAK) HSP 1 Score: 78.2 bits (191), Expect = 4.160e-15 Identity = 37/76 (48.68%), Postives = 54/76 (71.05%), Query Frame = 1 Query: 7 NFVKHMKTNKTLTYLDLSHNLIGSQESINYVRPEFYTGAEALADWISTGSCPLKYLDISWNTIRLDSAVYFGNAVA 234 N + + N+ LT LDLSHNLIG+ E +N V+P++ TG EA+A+ + +C L+ L++SWN IRL+SAV G A+A Sbjct: 36 NLLDALAHNRNLTSLDLSHNLIGTNEVMNVVQPDYTTGGEAVAESLEHPNCKLRALNLSWNLIRLESAVALGEALA 111
BLAST of mRNA_L-elsbetiae_contig705.15849.1 vs. uniprot
Match: A0A7S3M7K4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M7K4_9STRA) HSP 1 Score: 73.6 bits (179), Expect = 1.600e-14 Identity = 32/76 (42.11%), Postives = 54/76 (71.05%), Query Frame = 1 Query: 4 SNFVKHMKTNKTLTYLDLSHNLIGSQESINYVRPEFYTGAEALADWISTGSCPLKYLDISWNTIRLDSAVYFGNAV 231 +NFV+ + N+ L LD+S+NL+G E++N V+P+F TG E+L++ +S +CPL+ L++ WN IRL+ A N++ Sbjct: 61 ANFVEVLMNNRHLKELDMSNNLLGKDENLNAVQPDFVTGGESLSELLSNPNCPLRTLNLHWNMIRLEGAEVLCNSL 136
BLAST of mRNA_L-elsbetiae_contig705.15849.1 vs. uniprot
Match: T0Q8G5_SAPDV (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0Q8G5_SAPDV) HSP 1 Score: 73.6 bits (179), Expect = 1.760e-13 Identity = 36/74 (48.65%), Postives = 51/74 (68.92%), Query Frame = 1 Query: 10 FVKHMKTNKTLTYLDLSHNLIGSQESINYVRPEFYTGAEALADWISTGSCPLKYLDISWNTIRLDSAVYFGNAV 231 F MKTN+ T L+LS NLIG+ E++N V+P+ TG EALAD ++ + L LD+SWN +RL+SA+ G A+ Sbjct: 336 FADAMKTNRICTTLNLSRNLIGTSEALNAVQPDLVTGGEALADMLAANN-HLTKLDLSWNVLRLNSAIQLGRAI 408
BLAST of mRNA_L-elsbetiae_contig705.15849.1 vs. uniprot
Match: A0A397FVB9_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397FVB9_9STRA) HSP 1 Score: 70.1 bits (170), Expect = 2.300e-13 Identity = 36/73 (49.32%), Postives = 50/73 (68.49%), Query Frame = 1 Query: 10 FVKHMKTNKTLTYLDLSHNLIGSQESINYVRPEFYTGAEALADWISTGSCPLKYLDISWNTIRLDSAVYFGNA 228 F K + TN+T LDLS N+IGS E++N V+P+ TG EALA+ ++T L L++SWN +RL+SAV G A Sbjct: 9 FAKALCTNRTCHTLDLSRNVIGSNEALNVVQPDLVTGGEALAEMLATNG-HLTVLNLSWNFLRLNSAVELGRA 80
BLAST of mRNA_L-elsbetiae_contig705.15849.1 vs. uniprot
Match: A0A6G0WGZ0_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WGZ0_9STRA) HSP 1 Score: 72.4 bits (176), Expect = 4.490e-13 Identity = 39/75 (52.00%), Postives = 52/75 (69.33%), Query Frame = 1 Query: 10 FVKHMKTNKTLTYLDLSHNLIGSQESINYVRPEFYTGAEALADWISTGSCPLKYLDISWNTIRLDSAVYFGNAVA 234 F K + NKTL LDLS NLIGS E++N V+P+ TG EALA+ + T + L L++SWN +RL+SAV G A+A Sbjct: 350 FAKALCANKTLHNLDLSRNLIGSNEALNVVQPDLTTGGEALAEML-TANNHLTSLNLSWNFLRLNSAVELGRALA 423
BLAST of mRNA_L-elsbetiae_contig705.15849.1 vs. uniprot
Match: A0A835YQS8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQS8_9STRA) HSP 1 Score: 71.6 bits (174), Expect = 8.400e-13 Identity = 34/71 (47.89%), Postives = 50/71 (70.42%), Query Frame = 1 Query: 22 MKTNKTLTYLDLSHNLIGSQESINYVRPEFYTGAEALADWISTGSCPLKYLDISWNTIRLDSAVYFGNAVA 234 +K N++LT LDLS NLIG E +N V+P+ TG EA+AD + L++LD+SWN++R+ SA+ G A+A Sbjct: 54 LKLNRSLTELDLSRNLIGQTEVLNTVQPDLVTGGEAIADMLRVNKT-LRHLDLSWNSVRMGSALALGQALA 123 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig705.15849.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig705.15849.1 >prot_L-elsbetiae_contig705.15849.1 ID=prot_L-elsbetiae_contig705.15849.1|Name=mRNA_L-elsbetiae_contig705.15849.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=71bp MKTNKTLTYLDLSHNLIGSQESINYVRPEFYTGAEALADWISTGSCPLKYback to top mRNA from alignment at L-elsbetiae_contig705:144..1195- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig705.15849.1 ID=mRNA_L-elsbetiae_contig705.15849.1|Name=mRNA_L-elsbetiae_contig705.15849.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1052bp|location=Sequence derived from alignment at L-elsbetiae_contig705:144..1195- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig705:144..1195- >mRNA_L-elsbetiae_contig705.15849.1 ID=mRNA_L-elsbetiae_contig705.15849.1|Name=mRNA_L-elsbetiae_contig705.15849.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=426bp|location=Sequence derived from alignment at L-elsbetiae_contig705:144..1195- (Laminarionema elsbetiae ELsaHSoW15)back to top |