prot_L-elsbetiae_contig7046.15847.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig7046.15847.1
Unique Nameprot_L-elsbetiae_contig7046.15847.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length224
Homology
BLAST of mRNA_L-elsbetiae_contig7046.15847.1 vs. uniprot
Match: A0A6H5KQM7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQM7_9PHAE)

HSP 1 Score: 343 bits (880), Expect = 2.430e-105
Identity = 178/230 (77.39%), Postives = 198/230 (86.09%), Query Frame = 0
Query:    1 DNERCKTAQTINMFRVGEVQILVTTDACSEGIDVPECNLVVSMDKIKTSRSLIHTRGRARSKGGKFVIMVEKGDDMERDRVALMLMESEDIKRFHLGHERASNLVPFRHSHPRMVHTIESSGAVVDMDMSTALMNQTLGSMGCDFYPLLIAEEKTSE------SFVYREKSYMCRLELPSFLGMPTLDTSQVLVNENFWTKSQARSAVSFLAVLQMLEKGLINTNLNPVR 224
            D  R + AQTINMFR GEVQILVTTDACSEGIDVPECNLVVSMDKIKTSRSLIHTRGRARSKGGKFVIMVE GDD ERDRV+LMLMESEDIKRF LGHE+AS  VP RHSHP MVH IESSGAVVDMDM+T LMNQ L ++GCDF+PLLIAEEK+        + +YRE S+ CRLELPSF+GMPT+DT+ VLV+E+FW+KSQAR+AVSFLAV+QMLEKG I+  LNP R
Sbjct:  636 DFGRSRMAQTINMFRAGEVQILVTTDACSEGIDVPECNLVVSMDKIKTSRSLIHTRGRARSKGGKFVIMVEDGDDRERDRVSLMLMESEDIKRFQLGHEKASVRVPLRHSHPNMVHHIESSGAVVDMDMATPLMNQALSAVGCDFHPLLIAEEKSGPCEAPFGAMMYREPSFKCRLELPSFMGMPTIDTA-VLVDEHFWSKSQARAAVSFLAVVQMLEKGYIDERLNPTR 864          
BLAST of mRNA_L-elsbetiae_contig7046.15847.1 vs. uniprot
Match: D7FZW2_ECTSI (Dicer-like 3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZW2_ECTSI)

HSP 1 Score: 323 bits (828), Expect = 1.310e-98
Identity = 170/224 (75.89%), Postives = 186/224 (83.04%), Query Frame = 0
Query:    1 DNERCKTAQTINMFRVGEVQILVTTDACSEGIDVPECNLVVSMDKIKTSRSLIHTRGRARSKGGKFVIMVEKGDDMERDRVALMLMESEDIKRFHLGHERASNLVPFRHSHPRMVHTIESSGAVVDMDMSTALMNQTLGSMGCDFYPLLIAEEKTSESFVYREKSYMCRLELPSFLGMPTLDTSQVLVNENFWTKSQARSAVSFLAVLQMLEKGLINTNLNPVR 224
            D  R + AQTINMFR GEVQILVTTDACSEGIDVPECNLVVSMDKIKTSRSLIHTRGRARSKGGKFVIMVE GDDMERDRV+LMLMESEDIKRF LGHE+AS  VP RHSHP MVH IESSGAVVDMDM+T LMNQ L ++GCDF+PLLI                 CRLELPSF+GMPT+DT+ +L +E+FW+KSQARSAVSFLAV+QMLEKG I+  LNP R
Sbjct:  432 DFGRSRMAQTINMFRAGEVQILVTTDACSEGIDVPECNLVVSMDKIKTSRSLIHTRGRARSKGGKFVIMVEDGDDMERDRVSLMLMESEDIKRFQLGHEKASVRVPLRHSHPNMVHHIESSGAVVDMDMATPLMNQALSAVGCDFHPLLI-----------------CRLELPSFMGMPTIDTA-MLADEHFWSKSQARSAVSFLAVVQMLEKGYIDKRLNPTR 637          
BLAST of mRNA_L-elsbetiae_contig7046.15847.1 vs. uniprot
Match: A0A2S1PRV6_FUCSE (Putative dicer (Fragment) n=1 Tax=Fucus serratus TaxID=87148 RepID=A0A2S1PRV6_FUCSE)

HSP 1 Score: 223 bits (567), Expect = 1.850e-63
Identity = 117/191 (61.26%), Postives = 142/191 (74.35%), Query Frame = 0
Query:   32 IDVPECNLVVSMDKIKTSRSLIHTRGRARSKGGKFVIMVEKGDDMERDRVALMLMESEDIKRFHLGHERASNLVPFRHSHPRMVHTIESSGAVVDMDMSTALMNQTLGSMGCDFYPLLIAEEKTSESFVYREKSYMCRLELPSFLGMPTLDTSQVLVNENFWTKSQARSAVSFLAVLQMLEKGLINTNLNP 222
            IDVPECNLV++MDKIK SRSLIHTRGRARSKGGKFVIMVE  D  ER+R+  +L ESE+IK+F LG E+ S  VP R +HP MVH IE SGAVVDMDM+T L+ +TL + GCDF PLL+ E+    +      S+ CRLELPSFL M T+DT  +   E F TKS+ARSA  +LA+L+MLEKG ++  LNP
Sbjct:    1 IDVPECNLVIAMDKIKNSRSLIHTRGRARSKGGKFVIMVEDQDQAERERILQILRESENIKKFQLGSEKPSLRVPLRQAHPNMVHRIERSGAVVDMDMATCLLFETLSTTGCDFQPLLVVEDSIQPA------SFKCRLELPSFLDMGTIDTDSI-PGERFSTKSEARSAACYLALLKMLEKGYLDERLNP 184          
BLAST of mRNA_L-elsbetiae_contig7046.15847.1 vs. uniprot
Match: A0A4D9CT29_9STRA (Uncharacterized protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CT29_9STRA)

HSP 1 Score: 102 bits (253), Expect = 3.070e-21
Identity = 76/228 (33.33%), Postives = 120/228 (52.63%), Query Frame = 0
Query:    6 KTAQTINMFRVGEVQILVTTDACSEGIDVPECNLVVSMDKIKTSRSLIHTRGRARS-KGGKFVIM------VEKGDDMERDRVALMLMESEDIKRFHLGHERASNLVPFRHSHPRMVHTIESSGAVVDMDMSTALMNQTLG-SMGCDFYPLLIAEEKTSESFVYREK-SYMCRLELPSFLGMPTLDTSQVLVNENFWTKSQARSAVSFLAVLQMLEKGLINTNLNPVR 224
            K  + I  F  G+++ILV TD  SEGIDVP+C+LVV+ D +  S + +  RGRAR   GG FV+       +EK  D+E+   A+   + +D++  +L  +  S    F HS P+  + + ++GA + ++ S +L+NQ    +  C  Y LL   E  SE  V RE   + C L LP   G+P  ++S       F  K  AR+  ++ A ++    G ++ + NPVR
Sbjct:  451 KYKRAIEEFASGKLKILVATDVLSEGIDVPDCSLVVAFDTVANSTAFVQMRGRARQHNGGAFVLFASDQGGLEKLFDLEQG-AAIFEKDVDDMEMSYLERKDMS----FAHSFPQFSYAVPATGATITLNNSISLLNQLCQWNKDCVSYQLLPTVEY-SERVVSREGVMFKCLLTLPDVFGLPVFESSF------FPAKLIARAVAAYHACIEFHRCGFVDDDFNPVR 666          
BLAST of mRNA_L-elsbetiae_contig7046.15847.1 vs. uniprot
Match: A0A3F2RT86_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RT86_9STRA)

HSP 1 Score: 97.4 bits (241), Expect = 9.540e-20
Identity = 67/228 (29.39%), Postives = 109/228 (47.81%), Query Frame = 0
Query:    6 KTAQTINMFRVGEVQILVTTDACSEGIDVPECNLVVSMDKIKTSRSLIHTRGRARSKGGKFVIMVEKGDDMERDRVALMLMESEDIKRFHLGHERASNLVPFRHSHPRMVHT----------IESSGAVVDMDMSTALMNQTLGSMGCDFYPLLIAEEKTSESFVYREKSYMCRLELPSFLGMPTLDTSQVLVNENFWTKSQARSAVSFLAVLQMLEKGLINTNLNPV 223
            K   T++ F  G V+ILV+T    EG+D P+C L+V +D+I T R L+  +GRAR + G    + E+GD         ++ E E I +     E+   +       PR V            IES+GAV+D+D S   +NQ      C   P  +    + + +   E  Y  +L   + L +P     +   +    +KS AR+A +F A  ++L++GL++ +LN V
Sbjct:  348 KMESTLSKFESGAVRILVSTAVSVEGVDFPQCGLIVVLDRIGTGRMLMQLKGRARHEDGIVYYLAEEGDLAHHVHYEQLVREGEVINKLEFSREKVETI----QQQPRSVAAQMMGEMYKIEIESTGAVLDLDSSIPCINQF-----CQSLPDKLFTVNSKKLYTTSENRYGSKLLFVAELNLPPELNLESFCSTPMTSKSSARAAAAFSACQKLLDEGLLDDSLNSV 566          
BLAST of mRNA_L-elsbetiae_contig7046.15847.1 vs. uniprot
Match: A0A662WV63_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WV63_9STRA)

HSP 1 Score: 94.7 bits (234), Expect = 8.880e-19
Identity = 64/229 (27.95%), Postives = 107/229 (46.72%), Query Frame = 0
Query:    6 KTAQTINMFRVGEVQILVTTDACSEGIDVPECNLVVSMDKIKTSRSLIHTRGRARSKGGKFVIMVEKGDDMERDRVALMLMESEDIKRFHLGHERASNLVPFRHSHPRMVHT-----------IESSGAVVDMDMSTALMNQTLGSMGCDFYPLLIAEEKTSESFVYREKSYMCRLELPSFLGMPTLDTSQVLVNENFWTKSQARSAVSFLAVLQMLEKGLINTNLNPV 223
            K   T+  F  G V++L++T    EG+D P+C L+V MD++ TSR L+  +GRAR + G    + E+GD         ++ E E I R     E+   +       PR V             +ES+GAV+D+D S A +NQ      C   P  +        +   E  +  R    + L +P     +   ++   +KS AR++ +F    ++LE+GL++ +LN +
Sbjct:  476 KMETTLARFESGAVRVLISTAVSVEGVDFPQCGLIVIMDRVGTSRMLMQLKGRARHEDGIVYYLGEEGDLGHHVHFQQLVREGEMINRLEFSREKVETI----QQQPRSVSAQMLGSDDQKIELESTGAVLDLDSSIACVNQF-----CQSLPAKLFTVNAKRMYTVTENRFGSRTMFVAQLNLPVELELEPFKSDPMPSKSAARASAAFRGCQKLLEQGLLDDSLNSI 695          
BLAST of mRNA_L-elsbetiae_contig7046.15847.1 vs. uniprot
Match: G4Z716_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4Z716_PHYSP)

HSP 1 Score: 94.4 bits (233), Expect = 1.200e-18
Identity = 61/229 (26.64%), Postives = 110/229 (48.03%), Query Frame = 0
Query:    6 KTAQTINMFRVGEVQILVTTDACSEGIDVPECNLVVSMDKIKTSRSLIHTRGRARSKGGKFVIMVEKGDDMERDRVALMLMESEDIKRFHLGHERASNLVPFRHSHPRMVHT-----------IESSGAVVDMDMSTALMNQTLGSMGCDFYPLLIAEEKTSESFVYREKSYMCRLELPSFLGMPTLDTSQVLVNENFWTKSQARSAVSFLAVLQMLEKGLINTNLNPV 223
            K   T+  F  G +++L++T    EG+D P+C L+V MD++ TSR L+  +GRAR + G    + E+GD         ++ E+E I +    HER   +       PR +             IES+GAV+D+D S   +NQ      C   P  +        + + E+ Y  +    + L +P     +   ++   +K+ A+++ +F A  ++LE+ L++ +LN +
Sbjct:  472 KMETTLRKFESGSIRVLISTAVSVEGVDFPQCGLIVVMDRVGTSRMLMQLKGRARHEDGIVYYLAEEGDLAHEVYYKQLVREAETINQLEFSHERVETI----QQQPRSIAAQMMGNGEQKIEIESTGAVLDLDSSIVCINQF-----CQSLPSRLYTVDVKRLYSFSEERYGGKSMFTAELNLPIELELEAFRSDPMPSKAGAKASAAFSACQKLLEQQLLDESLNSI 691          
BLAST of mRNA_L-elsbetiae_contig7046.15847.1 vs. uniprot
Match: W2PDL1_PHYPN (Uncharacterized protein n=8 Tax=Phytophthora parasitica TaxID=4792 RepID=W2PDL1_PHYPN)

HSP 1 Score: 94.0 bits (232), Expect = 1.640e-18
Identity = 67/230 (29.13%), Postives = 113/230 (49.13%), Query Frame = 0
Query:    6 KTAQTINMFRVGEVQILVTTDACSEGIDVPECNLVVSMDKIKTSRSLIHTRGRARSKGGKFVIMVEKGDDMERDRVALMLMESEDIKRFHLGHERASNLVPFRHSHPRMV---------HTIE--SSGAVVDMDMSTALMNQTLGSMGCDFYPLLIAEEKTSESFVYREKS-YMCRLELPSFLGMPTLDTSQVLVNENFWTKSQARSAVSFLAVLQMLEKGLINTNLNPV 223
            K   T+  F  G +++LV+T    EG+D P+C L++ MD++ T+R L+  +GRAR + G    + E+GD         +  E+E I +     E+   +       PR V         HTIE  S+GAV+D+D S A +NQ   S+    + + +    T     Y  KS +   L LP  L + T  +  +       +K+ AR++ +F A  ++L++ LI+ +LN +
Sbjct:  475 KMETTLTKFEAGSIRVLVSTAVSVEGVDFPQCGLIIVMDRVGTARKLVQLKGRARHEDGVVYYLAEEGDLGHEVFYKQLTREAEVIDQLEFSREKVETI----QQQPRSVAAEMMGAGDHTIEIASTGAVLDLDSSIACINQFCQSLPTRLFTVDVKRLYTITEARYGGKSLFTAELNLPMELELETFRSDPMP------SKASARASAAFSACQKLLDQQLIDDSLNSI 694          
BLAST of mRNA_L-elsbetiae_contig7046.15847.1 vs. uniprot
Match: A0A0W8CPN9_PHYNI (Nuclear export mediator factor NEMF n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8CPN9_PHYNI)

HSP 1 Score: 94.0 bits (232), Expect = 1.900e-18
Identity = 67/230 (29.13%), Postives = 113/230 (49.13%), Query Frame = 0
Query:    6 KTAQTINMFRVGEVQILVTTDACSEGIDVPECNLVVSMDKIKTSRSLIHTRGRARSKGGKFVIMVEKGDDMERDRVALMLMESEDIKRFHLGHERASNLVPFRHSHPRMV---------HTIE--SSGAVVDMDMSTALMNQTLGSMGCDFYPLLIAEEKTSESFVYREKS-YMCRLELPSFLGMPTLDTSQVLVNENFWTKSQARSAVSFLAVLQMLEKGLINTNLNPV 223
            K   T+  F  G +++LV+T    EG+D P+C L++ MD++ T+R L+  +GRAR + G    + E+GD         +  E+E I +     E+   +       PR V         HTIE  S+GAV+D+D S A +NQ   S+    + + +    T     Y  KS +   L LP  L + T  +  +       +K+ AR++ +F A  ++L++ LI+ +LN +
Sbjct: 1556 KMETTLTKFEAGSIRVLVSTAVSVEGVDFPQCGLIIVMDRVGTARKLVQLKGRARHEDGVVYYLAEEGDLGHEVFYKQLTREAEVIDQLEFSREKVETI----QQQPRSVAAEMMGAGDHTIEIASTGAVLDLDSSIACINQFCQSLPTRLFTVDVKRLYTITEARYGGKSLFTAELNLPMELELETFRSDPMP------SKASARASAAFSACQKLLDQQLIDDSLNSI 1775          
BLAST of mRNA_L-elsbetiae_contig7046.15847.1 vs. uniprot
Match: A0A2Z6QQ33_9GLOM (Dicer-like protein 1 n=1 Tax=Rhizophagus clarus TaxID=94130 RepID=A0A2Z6QQ33_9GLOM)

HSP 1 Score: 93.2 bits (230), Expect = 3.420e-18
Identity = 65/223 (29.15%), Postives = 113/223 (50.67%), Query Frame = 0
Query:    9 QTINMFRVGEVQILVTTDACSEGIDVPECNLVVSMDKIKTSRSLIHTRGRARSKGGKFVIMVEKGDDMERDRVALMLMESEDIKRF--HLGHERASNL------VPFRHSHPRMVHTIESSGAVVDMDMSTALMNQTLGSMGCD-FYPLLIAEEKTSESFVYREKSYMCRLELPSFLGMPTLDTSQVLVNENFWTKSQARSAVSFLAVLQMLEKGLINTNLNP 222
            +TIN FR G++ +L+ T+   EG+D+  CN+V+  D   T R+ I +RGRAR K  K+++M+EK +  E+  +  M    +D+K +   L  +R   +                 +    +GA++  + + +L+N     +  D F P+L  + K    F+     + CRL LPS    P  +     V+E   ++S+++ A +F A LQ+LEK  +N +L P
Sbjct:  434 KTINKFRDGKINLLIATNVAEEGLDIQPCNVVIRFDFFNTLRAYIQSRGRARRKDSKYIVMIEKDNLKEQGILGEMKKAEDDMKEWCQMLPEDRKLQMNDDIDXXXXXXXDEGHYYINSETGALLSYESAVSLVNYYCSKLPKDSFCPVLQPDYK----FIKEHSGFTCRLTLPS--NSPVREA----VSEVCSSRSKSKKAAAFKACLQLLEKNALNNHLLP 646          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7046.15847.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KQM7_9PHAE2.430e-10577.39Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FZW2_ECTSI1.310e-9875.89Dicer-like 3 n=1 Tax=Ectocarpus siliculosus TaxID=... [more]
A0A2S1PRV6_FUCSE1.850e-6361.26Putative dicer (Fragment) n=1 Tax=Fucus serratus T... [more]
A0A4D9CT29_9STRA3.070e-2133.33Uncharacterized protein n=3 Tax=Monodopsidaceae Ta... [more]
A0A3F2RT86_9STRA9.540e-2029.39Uncharacterized protein n=3 Tax=Phytophthora kerno... [more]
A0A662WV63_9STRA8.880e-1927.95Uncharacterized protein n=2 Tax=Nothophytophthora ... [more]
G4Z716_PHYSP1.200e-1826.64Uncharacterized protein n=1 Tax=Phytophthora sojae... [more]
W2PDL1_PHYPN1.640e-1829.13Uncharacterized protein n=8 Tax=Phytophthora paras... [more]
A0A0W8CPN9_PHYNI1.900e-1829.13Nuclear export mediator factor NEMF n=1 Tax=Phytop... [more]
A0A2Z6QQ33_9GLOM3.420e-1829.15Dicer-like protein 1 n=1 Tax=Rhizophagus clarus Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 3..94
e-value: 1.1E-21
score: 78.9
NoneNo IPR availablePANTHERPTHR14950:SF44ENDORIBONUCLEASE DICER HOMOLOG 1coord: 6..175
NoneNo IPR availablePANTHERPTHR14950HELICASE-RELATEDcoord: 6..175
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 9..59
e-value: 6.7E-12
score: 45.7
IPR001650Helicase, C-terminalPROSITEPS51194HELICASE_CTERcoord: 1..102
score: 9.717
IPR005034Dicer dimerisation domainPFAMPF03368Dicer_dimercoord: 157..223
e-value: 5.6E-6
score: 26.4
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 8..86

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7046contigL-elsbetiae_contig7046:2716..10068 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7046.15847.1mRNA_L-elsbetiae_contig7046.15847.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig7046 2716..10068 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig7046.15847.1 ID=prot_L-elsbetiae_contig7046.15847.1|Name=mRNA_L-elsbetiae_contig7046.15847.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=224bp
DNERCKTAQTINMFRVGEVQILVTTDACSEGIDVPECNLVVSMDKIKTSR
SLIHTRGRARSKGGKFVIMVEKGDDMERDRVALMLMESEDIKRFHLGHER
ASNLVPFRHSHPRMVHTIESSGAVVDMDMSTALMNQTLGSMGCDFYPLLI
AEEKTSESFVYREKSYMCRLELPSFLGMPTLDTSQVLVNENFWTKSQARS
AVSFLAVLQMLEKGLINTNLNPVR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001650Helicase_C
IPR005034Dicer_dimerisation_dom
IPR027417P-loop_NTPase