mRNA_L-elsbetiae_contig704.15842.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig704.15842.1
Unique NamemRNA_L-elsbetiae_contig704.15842.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig704.15842.1 vs. uniprot
Match: D7G142_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G142_ECTSI)

HSP 1 Score: 412 bits (1059), Expect = 3.130e-141
Identity = 204/278 (73.38%), Postives = 226/278 (81.29%), Query Frame = 1 
Query:  379 MGKFRSGVFTVGAAKALDDLQLPGGRASGXXXXXXXXXXXXXXXXAGPTLGSAQEAALVIQRKDGRERHPGPSLGSIGERGTASSVIRSLKTHRSGPSLVTPHICIGAREDARNLQALKELGVTHVLNCAKQLASSHPREFVHARLELIDTSEEELAPFQKAGISFLRQVEGCGGRALVHCIAGCSRSVSIVLLHLMKSHRIRLKSAYDHVRAYRMVAQPNEGFRFQLATTEVKIFGSSSVSRDGESIWNFYRWNEVKQGIPYHAIDPPQACGGCTVA 1212
            M + R+G   V A      LQ   GRASG                 GP LGSAQE ALV +RK+ R RHPGP+L  IGERG ASS + +LKTH+ GPSLV+PHICIGAREDA+NL+ALKELGVTH+LNCAKQL SSHPREFVHARLEL DTSE+ELAPFQKAGISFLRQVE CGGRALVHCIAGCSRSVS+VLLHLM+ HRIRLK AY+HVR+YRMVAQPNEGFRFQLATTEVKIFGSSSVSRD +S WNFYRWNEVKQG+PYHA +PPQ+C GCT+A
Sbjct:    1 MARLRTGGIAVQAVTTFSSLQ---GRASGGGDSFGGPGGVGGGG-TGPALGSAQEEALVAERKEARNRHPGPTLEGIGERGPASSAMLALKTHKGGPSLVSPHICIGAREDAKNLEALKELGVTHILNCAKQLPSSHPREFVHARLELADTSEQELAPFQKAGISFLRQVEDCGGRALVHCIAGCSRSVSMVLLHLMEGHRIRLKLAYEHVRSYRMVAQPNEGFRFQLATTEVKIFGSSSVSRDADSTWNFYRWNEVKQGVPYHATEPPQSCCGCTMA 274
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BLAST of mRNA_L-elsbetiae_contig704.15842.1 vs. uniprot
Match: A0A7S3YH23_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YH23_HETAK)

HSP 1 Score: 192 bits (488), Expect = 1.310e-54
Identity = 94/215 (43.72%), Postives = 141/215 (65.58%), Query Frame = 1 
Query:  541 EAALVIQRKDGRERHPGPSLGSIGERGTASSVIRSLKTHRSGPSLVTPHICIGAREDARNLQALKELGVTHVLNCA-KQLASSHPREFVHARLELIDTSEEELAPFQKAGISFLRQVEGCGGRALVHCIAGCSRSVSIVLLHLMKSHRIRLKSAYDHVRAYRMVAQPNEGFRFQLATTEVKIFGSSSVSRDGESIWNFYRWNEVKQGIPYHAIDP 1182
            E ALV Q +    RHPGP+LG     G  +S  R L     G SLV+ HI +G RED+ +++ L+++G+TH+LN A +Q+ +SHP++F++  L+L D  +++L  ++   + F++ VE  GGR LVHCIAG SRSVS+V++HLM SH++ L+ A+DH+++ R    PN GF  QLA  EV+ FG+++V+   E  WNFY WN +KQ  P   + P
Sbjct:   98 EKALVKQAQRAMARHPGPALG-----GGGASAYRQLTAPLHGLSLVSQHIALGNREDSADIEGLQKMGITHILNAAAEQVRNSHPKDFIYMSLKLADNPQQDLTKYRDKAVGFIQHVERLGGRVLVHCIAGVSRSVSLVIMHLMNSHQMYLRVAFDHIKSIRPYISPNNGFLLQLAKYEVERFGATTVASAPE--WNFYEWNALKQRTPKIEVGP 305
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BLAST of mRNA_L-elsbetiae_contig704.15842.1 vs. uniprot
Match: A0A835ZC85_9STRA (Protein-tyrosine phosphatase-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC85_9STRA)

HSP 1 Score: 171 bits (433), Expect = 2.060e-47
Identity = 94/235 (40.00%), Postives = 139/235 (59.15%), Query Frame = 1 
Query:  580 RHPGPSLGSIGERGTASSVIRSLKTHRSGPSLVTPHICIGAREDARNLQALKELGVTHVLNCAKQLASSHPREFVHARLELIDTSEEELAPFQKAGISFLRQVEGCGGRALVHCIAGCSRSVSIVLLHLMKS---------HRIRLKSAYDHVRAYRMVAQPNEGFRFQLATTEVK------------------IFGSSSVSRDGESIWNFYRWNEVKQGIPYHAIDPPQACGGC 1203
            RHPGP L +    G  SS I   +  R  P LV+P ICIG++EDA + + L+ELGVTHVLN A++   +HP +F   +++L+D +++ L PF+    +F+R VEG GGR LVHC+AGCSRSVS+V+ HLM +         H + L++A  H+R +R +A PN+ F ++LA  E +                  IF +SSV+R   + +NFY+WN++K+   +H   P     GC
Sbjct:    3 RHPGPPLPAACIVGARSSFIDMGQDARP-PQLVSPCICIGSKEDAADAEWLRELGVTHVLNVAREAPLAHPAQFFCLKVDLLDNADQTLRPFRDQTAAFMRNVEGIGGRVLVHCVAGCSRSVSVVITHLMAAVPAVRCALLHGLCLRTALAHIRRHRSLAYPNQAFLYELAVMETERSKTDGQLRWQIMSRLRQIFKASSVNRGVIAEFNFYKWNKIKRQYRHHC--PEYDSSGC 234
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BLAST of mRNA_L-elsbetiae_contig704.15842.1 vs. uniprot
Match: A0A7S2AYV9_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2AYV9_9STRA)

HSP 1 Score: 169 bits (429), Expect = 2.720e-46
Identity = 77/181 (42.54%), Postives = 117/181 (64.64%), Query Frame = 1 
Query:  637 IRSLKTHRSGPSL-----VTPHICIGAREDARNLQALKELGVTHVLNCAKQLASSHPREFVHARLELIDTSEEELAPFQKAGISFLRQVEGCGGRALVHCIAGCSRSVSIVLLHLMKSHRIRLKSAYDHVRAYRMVAQPNEGFRFQLATTEVKIFGSSSVSRDGESIWNFYRWNEVKQGIP 1164
            I ++KT   G  L     +T HI +G RE AR+   L+ELGVTHVLN   QL + HP +FV+ +++++D  E  +  +QK    F++ +E  GGR LVHC+AGCSRSV +VL+HLM  H + L+  ++H+++ R    PNEGF+  LA  EV+IFG+++++   + +W+FY WN +K   P
Sbjct:   86 ISNMKTSMIGGDLTNCSHITRHILVGNRESARDATGLQELGVTHVLNGTSQLPNFHPHKFVYLKIDMLDAPETPIVSYQKKASKFIQHIEEKGGRVLVHCVAGCSRSVCLVLMHLMVHHGVYLRDGWEHMKSVRPQMNPNEGFKLALAKLEVQIFGATTMANCQDKLWDFYGWNAIKSSYP 266
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BLAST of mRNA_L-elsbetiae_contig704.15842.1 vs. uniprot
Match: A0A7S3HR27_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HR27_9STRA)

HSP 1 Score: 171 bits (433), Expect = 8.750e-46
Identity = 87/215 (40.47%), Postives = 134/215 (62.33%), Query Frame = 1 
Query:  541 EAALVIQRKDGRERHPGPSLGSIGERGTASSVIRSLKTHRSGP-------SLVTPHICIGAREDARNLQALKELGVTHVLNCAKQLASSHPREFVHARLELIDTSEEELAPFQKAGISFLRQVEGCGGRALVHCIAGCSRSVSIVLLHLMKSHRIRLKSAYDHVRAYRMVAQPNEGFRFQLATTEVKIFGSSSVSRDGESIWNFYRWNEVKQGIP 1164
            EA+++ +RK  R RH G S+ SI +  +  S   +  T+ +         SL+T +I +G REDA N   L E GVTHVLN A+QL +  P+ FV+ ++ L+D +   +    ++ +SFL  VE   GR L+HC+AG SRSVS++L+HLM  HR+ L+ ++ +VR+ R    PN+ F+ QLA  EV+    SSV++DG+ +W+FY WN +K+ +P
Sbjct:  112 EASIIEERKGNRARHVGRSISSIRKNSSVHSFSLAGFTNMTSSISQFRAMSLITDNILLGGREDAENAAQLIEYGVTHVLNTAQQLPNYFPQHFVYLKVGLLDATNANVVEVMESVVSFLSHVERVQGRVLLHCLAGVSRSVSVLLMHLMVRHRLCLQHSFRYVRSCRPQINPNDAFKLQLARLEVQELRYSSVAKDGDKMWDFYEWNAIKRTMP 326
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BLAST of mRNA_L-elsbetiae_contig704.15842.1 vs. uniprot
Match: A0A8J2SU05_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SU05_9STRA)

HSP 1 Score: 159 bits (401), Expect = 7.690e-42
Identity = 83/207 (40.10%), Postives = 121/207 (58.45%), Query Frame = 1 
Query:  553 VIQRKDGRERHPGPSLGSIGERGTAS--SVIRSLKTHRSGPSLVTPHICIGAREDARNLQALKELGVTHVLNCAKQLASSHPREFVHARLELIDTSEEELAPFQKAGISFLRQVEGCGGRALVHCIAGCSRSVSIVLLHLMKSHRIRLKSAYDHVRAYRMVAQPNEGFRFQLATTEVKIFGSSSVS-RDGESIWNFYRWNEVKQGIP 1164
            V Q +    R P  + G+   +G     SV   ++ H    ++VT H+ +G REDA + + L+ +G+THVLN  KQL + HP  F++ ++ L+D  +  +    +   +FL++VE  GGR LVHCIAG SRSV++ ++HLM SH + L  A+ H+   R  A PNEGF+ QLA  EV + G SSV+ RD    W FY WN  K  +P
Sbjct:   89 VAQARIHARRGPRVANGNFSSQGLPKFFSVPDDIRRH----TIVTHHLVLGCREDAMDRRRLEGIGITHVLNTCKQLPNYHPDAFIYHKIPLMDAPDAPIMSCFEVAANFLQRVERVGGRCLVHCIAGSSRSVALAIVHLMVSHHVPLHVAFHHINRMRPQANPNEGFKLQLALLEVSVLGGSSVAGRDAGDAWFFYEWNTRKNAVP 291
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BLAST of mRNA_L-elsbetiae_contig704.15842.1 vs. uniprot
Match: K3XC22_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3XC22_GLOUD)

HSP 1 Score: 150 bits (378), Expect = 4.690e-39
Identity = 74/164 (45.12%), Postives = 107/164 (65.24%), Query Frame = 1 
Query:  661 SGPSLVTPHICIGAREDARNLQALKELGVTHVLNCAKQLASSHPREFVHARLELIDTSEEELAPFQKAGISFLRQVEGCGGRALVHCIAGCSRSVSIVLLHLMKSHRIRLKSAYDHVRAYRMVAQPNEGFRFQLATTEVKIFGSSSVSRDGESIWNFYRWNEVK 1152
            S P+ +  HI +G+RE+A N + L   G+THV NCA Q+A+    EFV+ +L L D+  EEL P  +   +FLR+VE   GRAL+HCI+G SRS ++++ +LM    +RL  AY+ VR  R   QPN+ FR QLA  E+ +FG+SSV++  +  WNFY W+E +
Sbjct:   85 SSPTPILEHIVLGSRENAANREQLYSAGITHVCNCALQVANYFEGEFVYVKLHLHDSVNEELIPHFQTVAAFLRRVESLRGRALIHCISGVSRSPALLVAYLMIDKHMRLIDAYNLVRRKRKSVQPNQAFRLQLAKFELMLFGASSVAKTQDKDWNFYAWHEFQ 248
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BLAST of mRNA_L-elsbetiae_contig704.15842.1 vs. uniprot
Match: A0A662XVC1_9STRA (Tyrosine-protein phosphatase domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XVC1_9STRA)

HSP 1 Score: 144 bits (363), Expect = 1.300e-36
Identity = 70/162 (43.21%), Postives = 107/162 (66.05%), Query Frame = 1 
Query:  667 PSLVTPHICIGAREDARNLQALKELGVTHVLNCAKQLASSHPREFVHARLELIDTSEEELAPFQKAGISFLRQVEGCGGRALVHCIAGCSRSVSIVLLHLMKSHRIRLKSAYDHVRAYRMVAQPNEGFRFQLATTEVKIFGSSSVSRDGESIWNFYRWNEVK 1152
            P+++  H+ +G+RE+A +   L   GVTH+ NCAKQ+A+S   E+++ +L L D+ +EEL P  +    FL++VE   GRAL+HCI+G S +  +++ +LM   ++ L  AY+ VR  R + QPN+ FR QLA  E+ +FGSSSV+   +  WNF+ WNEVK
Sbjct:  117 PTVILDHVLLGSRENAADSAQLYNAGVTHICNCAKQVANSFEGEYIYLKLNLHDSLDEELLPHFQTVSKFLKRVERLQGRALIHCISGMSPA--LLIAYLMIDKKMPLLQAYNMVRRKRRLVQPNQAFRLQLAKYELMLFGSSSVATTSDKDWNFFAWNEVK 276
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BLAST of mRNA_L-elsbetiae_contig704.15842.1 vs. uniprot
Match: A0A7S1CB64_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CB64_9STRA)

HSP 1 Score: 136 bits (342), Expect = 1.170e-32
Identity = 78/200 (39.00%), Postives = 107/200 (53.50%), Query Frame = 1 
Query:  622 TASSVIRSLKTHRSGPSLVTPHICIGAREDARNLQALKELGVTHVLNCAKQLASSHPREFVHARLELIDTSEEELAPFQKAGISFLRQVEGCGGRALVHCIAGCSRSVSIVLLHLMKSHRIRLKSAYDHVRAYRMVAQPNEGFRFQLATTEVKIFGSSSVSRDGESIWNFYRWNEVKQGIPYHA----IDPPQACGGCTV 1209
            TA  ++ S     S    V   I IG R DA++   L E GVTHVLN  KQL + H R+F++ +L + D+  E+L P  +A   FL          +VHCIAG SRSV+IV+ +L+      L SA   V+ +R +A PNE F FQL   E++  G SSV+   + +W F+RWN VK+  P       I P +  G C V
Sbjct:  182 TARCLLISGDFRESSKVPVDGFIIIGDRADAKSRTGLIEKGVTHVLNATKQLPNYHERDFMYCKLPIEDSPTEDLTPHYEAAFDFLDSARAVDSFCMVHCIAGVSRSVAIVMAYLLVRRDHTLLSAGRLVKKHRPLASPNEAFLFQLTQLEIETLGGSSVATTRDRMWQFHRWNVVKRKAPILTPKGIIRPEERGGACVV 381
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BLAST of mRNA_L-elsbetiae_contig704.15842.1 vs. uniprot
Match: F0YLX9_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YLX9_AURAN)

HSP 1 Score: 125 bits (314), Expect = 2.100e-31
Identity = 61/123 (49.59%), Postives = 80/123 (65.04%), Query Frame = 1 
Query:  730 LKELGVTHVLNCAKQLASSHPREFVHARLELIDTSEEELAPFQKAGISFLRQVEGCGGRALVHCIAGCSRSVSIVLLHLMKSHRIRLKSAYDHVRAYRMVAQPNEGFRFQLATTEVKIFGSSS 1098
            L+ELGVTHVLN   QL + HP  FV+ ++ ++D  +  +    +    FL++VE  GGR LVHCIAG SRSV++ L+HLM SHR+ L   + HV   R  A PNEGF+ QLA  EVK+ G SS
Sbjct:    2 LQELGVTHVLNACSQLPNYHPDHFVYHKIAILDAPKAPIVTCAEVAAQFLQRVERVGGRCLVHCIAGSSRSVTLTLMHLMISHRVPLHVGFHHVNRMRPQANPNEGFKLQLALLEVKVLGGSS 124
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig704.15842.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G142_ECTSI3.130e-14173.38Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S3YH23_HETAK1.310e-5443.72Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A835ZC85_9STRA2.060e-4740.00Protein-tyrosine phosphatase-like protein n=1 Tax=... [more]
A0A7S2AYV9_9STRA2.720e-4642.54Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S3HR27_9STRA8.750e-4640.47Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A8J2SU05_9STRA7.690e-4240.10Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
K3XC22_GLOUD4.690e-3945.12Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A662XVC1_9STRA1.300e-3643.21Tyrosine-protein phosphatase domain-containing pro... [more]
A0A7S1CB64_9STRA1.170e-3239.00Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
F0YLX9_AURAN2.100e-3149.59Uncharacterized protein (Fragment) n=1 Tax=Aureoco... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig704contigL-elsbetiae_contig704:12899..17681 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score410.2
Seed ortholog evalue1.1e-111
Seed eggNOG ortholog2880.D7G142
Hectar predicted targeting categoryother localisation
EggNOG free text desc.phosphatase
EggNOG OGsCOG2453@1,KOG1716@2759
COG Functional cat.T
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Ec32 ortholog descriptionProtein-tyrosine phosphatase-like
Ec32 orthologEc-07_003270.1
Exons8
Model size1215
Cds size1215
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig704.15842.1prot_L-elsbetiae_contig704.15842.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig704 12899..17681 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816781.7843847-CDS-L-elsbetiae_contig704:12898..130391622816781.7843847-CDS-L-elsbetiae_contig704:12898..13039Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig704 12899..13039 -
1691683808.8109043-CDS-L-elsbetiae_contig704:12898..130391691683808.8109043-CDS-L-elsbetiae_contig704:12898..13039Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig704 12899..13039 -
1622816781.798223-CDS-L-elsbetiae_contig704:14153..142981622816781.798223-CDS-L-elsbetiae_contig704:14153..14298Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig704 14154..14298 -
1691683808.8217967-CDS-L-elsbetiae_contig704:14153..142981691683808.8217967-CDS-L-elsbetiae_contig704:14153..14298Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig704 14154..14298 -
1622816781.8084462-CDS-L-elsbetiae_contig704:14539..146421622816781.8084462-CDS-L-elsbetiae_contig704:14539..14642Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig704 14540..14642 -
1691683808.8314862-CDS-L-elsbetiae_contig704:14539..146421691683808.8314862-CDS-L-elsbetiae_contig704:14539..14642Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig704 14540..14642 -
1622816781.8218682-CDS-L-elsbetiae_contig704:15464..156311622816781.8218682-CDS-L-elsbetiae_contig704:15464..15631Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig704 15465..15631 -
1691683808.841915-CDS-L-elsbetiae_contig704:15464..156311691683808.841915-CDS-L-elsbetiae_contig704:15464..15631Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig704 15465..15631 -
1622816781.8355277-CDS-L-elsbetiae_contig704:16114..162061622816781.8355277-CDS-L-elsbetiae_contig704:16114..16206Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig704 16115..16206 -
1691683808.85193-CDS-L-elsbetiae_contig704:16114..162061691683808.85193-CDS-L-elsbetiae_contig704:16114..16206Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig704 16115..16206 -
1622816781.8458369-CDS-L-elsbetiae_contig704:16413..167941622816781.8458369-CDS-L-elsbetiae_contig704:16413..16794Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig704 16414..16794 -
1691683808.8642218-CDS-L-elsbetiae_contig704:16413..167941691683808.8642218-CDS-L-elsbetiae_contig704:16413..16794Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig704 16414..16794 -
1622816781.855844-CDS-L-elsbetiae_contig704:17027..171441622816781.855844-CDS-L-elsbetiae_contig704:17027..17144Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig704 17028..17144 -
1691683808.8751552-CDS-L-elsbetiae_contig704:17027..171441691683808.8751552-CDS-L-elsbetiae_contig704:17027..17144Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig704 17028..17144 -
1622816781.8657558-CDS-L-elsbetiae_contig704:17612..176811622816781.8657558-CDS-L-elsbetiae_contig704:17612..17681Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig704 17613..17681 -
1691683808.8864858-CDS-L-elsbetiae_contig704:17612..176811691683808.8864858-CDS-L-elsbetiae_contig704:17612..17681Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig704 17613..17681 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig704.15842.1

>prot_L-elsbetiae_contig704.15842.1 ID=prot_L-elsbetiae_contig704.15842.1|Name=mRNA_L-elsbetiae_contig704.15842.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=405bp
RSRETSRDRPRELSRDRPTGSQRPSDDTQADENGQFGRPSSALQNAATTP
AAAATGASKRRQVGGGEQRKPLPPLRNINRHTVRVAQSGADHATPKRGAG
LRSASPSPPSTSHGRPDGQRRNKLSPMGKFRSGVFTVGAAKALDDLQLPG
GRASGGGGSSSAAAGGGGAGGAGPTLGSAQEAALVIQRKDGRERHPGPSL
GSIGERGTASSVIRSLKTHRSGPSLVTPHICIGAREDARNLQALKELGVT
HVLNCAKQLASSHPREFVHARLELIDTSEEELAPFQKAGISFLRQVEGCG
GRALVHCIAGCSRSVSIVLLHLMKSHRIRLKSAYDHVRAYRMVAQPNEGF
RFQLATTEVKIFGSSSVSRDGESIWNFYRWNEVKQGIPYHAIDPPQACGG
CTVA*
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mRNA from alignment at L-elsbetiae_contig704:12899..17681-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig704.15842.1 ID=mRNA_L-elsbetiae_contig704.15842.1|Name=mRNA_L-elsbetiae_contig704.15842.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4783bp|location=Sequence derived from alignment at L-elsbetiae_contig704:12899..17681- (Laminarionema elsbetiae ELsaHSoW15)
CGCTCCCGCGAGACTTCACGCGACCGCCCCCGAGAATTGTCACGAGACCG
TCCAACGGGGAGCCAAAGGGTAAGCCCTCTACACATTTTAAAAGTGGGTG
ATGTCTTCTCCACCGCACGTAAAGCTAGAGCTGCCGATTGGGAGCGCCGT
CTCTCAGAGTCAACGGTAGACAAGTCCGTCCACGCATGGGATCCAGTCTC
AGAGGCAGGCCCTGCTCCAGCGGCCACGTGAGAAGCAGTATCGGTTTACA
CACAGAAATATTTGATAGATGCATGCTCGCCCTCAAAACTGCAGAGAGAA
GAAGGGGTTGTCCCCTCCCGTGTAACGCGAAGCAGCACACGCACGAGAAC
GAAACACCATTTATTGCCGGGTTCGCACACACATACTTTATTCAGCCAAG
GATCTGGCTACCACATTTATTTCCTCTTTGGGGCTCAAAAAGTGTACTCC
TGTTCATACGCTGGCCTGTATCCATCCCTCGAAACTCTGACGACCCCCCC
CCGCCGCCCTCCTGTATCTGCGTGCGTACTCTCGTAGCCGTCGGACGATA
CTCAGGCAGACGAGAACGGGCAATTTGGTCGGCCGTCCTCCGCCCTTCAA
AACGCAGCAACGACACCGGCGGCAGCAGCGACCGGAGCGAGCAAACGCCG
ACAGGTCGAAGAACTACGAAAATATGTCTAAATGCATATCTCGAGTGCAC
GCTTCTGTGCACTGACTGTGCATTTTGTTTTTTTGAACCCCCCGTATCCT
CCCTTCCTTCCTTCCTTGACAGAACCCTGATGCGTGTCCTCTTTTTGTGT
CACCCAGGCGCCTGTACTATCCTCCCCAGTCTCCATACCCTTACCCCTTC
TTCCTTCCGCGTTAAACCGTATTTTGTTTATCCGCAGGTGGGGGGCGGGG
AGCAGCGGAAACCGCTCCCCCCGCTCCGCAATATCAACCGCCACACGGTG
CGAGTAGCCCAAAGCGGCGCCGACCACGCAACCCCCAAGAGAGGAGCCGG
CCTCCGGTCGGCCTCGCCGTCCCCGCCATCGACATCCCACGGCAGGCCGG
ACGGCCAGAGGCGCAACAAGCTCTCTCCGATGGGGAAATTTCGGAGCGGC
GTGTTCACGGTGGGAGCCGCGAAGGCCCTGGACGATCTGCAGCTACCGGG
AGGCCGTGCCAGCGGCGGTGGTGGAAGCTCAAGCGCAGCGGCGGGCGGCG
GCGGAGCCGGGGGGGCGGGGCCGACGTTAGGGTCCGCCCAAGAGGCAGCG
TTGGTGATACAGCGGAAGGTGGGGTCTGGGGGAAGGATGAACCCGCCATT
CGTTCATGCCTGGTGCTAAAATATTGAGCATCTTCGCCGTGGAGGGTGGT
TCTCAGCGGGAGCAAGGCCCATTTAACGCAGAAGTCATGTTTTTATCGCG
GCGCGAACAGCAGCAGCAAGTACTACCTGCGCCCATCCAACCAAAACTCT
TCTCCTGTGCCTCTCGCCGCGGCAGGACGGCAGAGAGCGGCATCCCGGCC
CATCATTGGGAAGCATTGGCGAGCGCGGGACCGCATCATCGGTCATCCGT
TCGCTAAAGACACACAGGTAGAAAAAGTTCAACACGCGCTCGGCTGCATA
TTGAAAGAAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGGAACGCAAGG
AAATCACTCACAAGGTGCACTTGCCTTAATCCGCTGGCCAACCCCGGGAA
AACTACGACGGATGTAGGTTTATAAGTGTTGCTTTGGAATTGATTATACT
TTCAGAGATTGTGCATGGGTGCCACAGGACACAGGCGCTCGGAAGAAAGA
AACGCAAGACGTGCCGGGCAAAAGAACTGCACCAGCAGGTTGTTTCTTTT
TCTTCAACAAATCCAACACGCTGGAGGAAGCAGGTAGCAGGAGAACGGTT
ACAGGCTTGTGGGTGTACGCTTAGCTTGGTTGGCGTTTCAAACGTGGGTG
TTTCAAACGATCGCTCACGAACGTGGACCCAGACTCTACAAAAAAGAATA
AAACTGACAAAATAAACACAAATCGTGCAATCCTCCTTGGCGGCTGCCAG
GAGCGGCCCGTCACTGGTGACCCCGCACATCTGCATAGGCGCAAGAGAAG
ATGCCAGGAATCTCCAAGCCCTGAAAGAGCTGGGAGTCACCCACGTCCTG
AACTGCGCCAAGCAGCTGGCGAGCTCACACCCGAGGGAGTTCGTTCACGC
GCGGCTGGAGCTCATAGGTGTGCGTTGACAGAGCACGGCACTCTTTTGCT
TTACTTCTTCTTCAGTTGCGTCGAGTGTGCCCTGCTTTTGTGACCACGGG
CCCCCATGGATGTTTTTGGGCTATATAGAGAGCTAATGTGAGGAGCAACA
ACACAACAAACAACAACACTCTCCCGAATAGTGCGGGCACTTTGTTCTTC
AGGCAATTGGCAATACCTTTCCAAGCTTCCCGGTGGCTGCCACCAGAGGT
TCGATCGTCCTAACGGCACTCGACCACATGAACAACCGAGTGGTTATCAA
AACGTGCCACACATACACAGGCGCGATGGCTCTTAAGCAATGTAGTCGAA
AATACCTCCCAACATAATTATTAGATGATTAGTCCATCGGACTCAAATGT
GAACAGAACATCGTCGGAAAGACAAGGGGAAAACCCTCCTTCTCGTACTT
GCCCTCGTGCCCCATGTGAATGTTATTTATAAATGGTTCGAAAGTTACGA
AGAAGTAAATTTACCATGTGTATGTGTGTGTGTGTGTGCGTGTGTGTGTG
TGTGCTTGTTTGCTTTTGTTCCATCTATTCTGTCGGTGCCCTTTACACAT
TTCGGTCTATGTTGCTGCACCTTTCGGTATGTATGTAGTGTACAATATTC
CGGCGTAGTCGTAGTATATATGTCCTCTGTACGGCGAGATGTATCATGAG
ACGGTGGGGGGGGGGGGGGGCGGTAAATAATTATCTAAACATTATTTTTT
TTCCGACAAGCATTTTTTCTGTAATGATTTCCCTCGTCTACACAATAGAA
ACCGTTTGTTGCGCCGCGAAATATACGTTCATTGCACAGACACAAGCGAG
GAAGAGCTAGCACCGTTCCAGAAGGCGGGGATTTCCTTCCTTCGACAGGT
CGAGGGGTGCGGTGGCCGAGCTCTCGTCCACTGCATCGCGGGGTAAGAGA
AAAAACGTGCATTTTTGTGGTTTTTTATTTATCTCTGCCGATAGTAGTCT
GATGTCACGATGAGGCCCAGCTTTCTTTGTCTTCCGTCGGGGCTCAGAGA
CGAGGCGTGCGTGATCCGGGCGTGCATGCGGCCATGTACAACAATAGTAA
GGCGGGACCGAGCCCAAGGGACCAATAACCGTCAATTGATGACAACAGTT
CATTCCGCCCACTCGCTTCCAATTCTTGTCCAGATGCTCTCGATCAGTGT
CGATAGTGCTGCTGCACCTGATGAAGAGCCATCGAATCCGACTCAAGAGC
GCGTACGACCACGTGAGGGCCTACCGAATGGTGGCCCAACCCAACGAGGG
GTTTCGGTTCCAGCTGGCGACAACGGAGGTATTTACGTATATACATATGT
ACAGAAAGGGCAGGGCGCCCGTAAGAAACTTCCAAGCAAGAAAATGAGAT
TCAAGTTTCCGCCAAATTAAGTCCATTGGGCCAAGGAACATGCCTCAATC
GTCAATCGCGGATCCTACACTACACCCTAGATATTCAAAAACCTTACGCT
CGACGGAGTAGTGGCGATGAAATAAGAAAGTGAGCCTCAACCCATATTTA
TTTGACGTTCGTTACTTGCGGGCGCCCTCTGTATGCATGGTTCGTATACA
TCTACCTCGCAAATGTTTGCAGGGGAGATGTTGAACTCTTCTGATATTTT
GGGTTGTTTTTCTGCTCGCTTCGCCAAATATTACGTCACTGTATGGAATA
CCATTTGAACCCCATATCGAGTCCTTGCTCTAGTGTGGGGTAGGTTCCAT
CTTTGATCCATAGTTTATTTTTAAAAGCTGTCGATGGAGAGCAGCCGCTG
CATACATGGCAGCGTACAGTAGTATCAGCGTACTCGAAAATATGTGCGTG
ATTATGAGTCAGTTGGTTATTTTGTGAGGCGACCTCTTGTGGTCGGTGCA
CGGTGAGGTGTTAGTCACACCCGCCTGGCTGGTTGGTATGGCCCGAAAAA
GCCGCTCACTGCATAGTTCAGCCCGCAACACAACAGACTTATACCTGACA
GAAAGTGGGTGTCAGATCTTAATAATCTAAGGAAAGGCGCCTAGGTAGCT
AGTAATCGTATATGTCGCTTGGGATTTACTCGCAAGAAACCTGCCTTTTT
CGGGCCCCATCTCCGGTCGCCCACCCAAGGCACGGAAATGCGTCCTGTTT
CCATCATCCACCGGGAGAGCACTAGAAACCGCTGTGTGTAGACGATGGCT
TCGCTGCACTCTCTCTCTTTTTCTTGCAAAGTCTGTCAGGTATCCCGACT
CCATCATGACGCTGCCCAAAACGTACAGGCTACATCTGTATTGGTAATGG
TGAGAAAAGCTTTTTTTGGTCATCGTACGGCGATGTCCAACTCCGTATCG
GAGCCAGCGCCCACAGATGGTAGGCTGGGCTCCTCTCAATCCCCTCCCGA
TCGCTCCCCTGCCACGGTGTTCTTGTTGCCGGGTTTTCAAAGGTGAAGAT
ATTTGGGTCCTCTTCCGTCAGCCGAGACGGGGAGAGCATCTGGAACTTTT
ACCGGTGGAACGAGGTGAAGCAGGGCATTCCTTACCACGCCATCGACCCA
CCACAGGCCTGCGGCGGCTGCACCGTGGCATAG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig704:12899..17681-

>mRNA_L-elsbetiae_contig704.15842.1 ID=mRNA_L-elsbetiae_contig704.15842.1|Name=mRNA_L-elsbetiae_contig704.15842.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2430bp|location=Sequence derived from alignment at L-elsbetiae_contig704:12899..17681- (Laminarionema elsbetiae ELsaHSoW15)
CGCTCCCGCGAGACTTCACGCGACCGCCCCCGAGAATTGTCACGAGACCG
TCCAACGGGGAGCCAAAGGCGCTCCCGCGAGACTTCACGCGACCGCCCCC
GAGAATTGTCACGAGACCGTCCAACGGGGAGCCAAAGGCCGTCGGACGAT
ACTCAGGCAGACGAGAACGGGCAATTTGGTCGGCCGTCCTCCGCCCTTCA
AAACGCAGCAACGACACCGGCGGCAGCAGCGACCGGAGCGAGCAAACGCC
GACAGCCGTCGGACGATACTCAGGCAGACGAGAACGGGCAATTTGGTCGG
CCGTCCTCCGCCCTTCAAAACGCAGCAACGACACCGGCGGCAGCAGCGAC
CGGAGCGAGCAAACGCCGACAGGTGGGGGGCGGGGAGCAGCGGAAACCGC
TCCCCCCGCTCCGCAATATCAACCGCCACACGGTGCGAGTAGCCCAAAGC
GGCGCCGACCACGCAACCCCCAAGAGAGGAGCCGGCCTCCGGTCGGCCTC
GCCGTCCCCGCCATCGACATCCCACGGCAGGCCGGACGGCCAGAGGCGCA
ACAAGCTCTCTCCGATGGGGAAATTTCGGAGCGGCGTGTTCACGGTGGGA
GCCGCGAAGGCCCTGGACGATCTGCAGCTACCGGGAGGCCGTGCCAGCGG
CGGTGGTGGAAGCTCAAGCGCAGCGGCGGGCGGCGGCGGAGCCGGGGGGG
CGGGGCCGACGTTAGGGTCCGCCCAAGAGGCAGCGTTGGTGATACAGCGG
AAGGTGGGGGGCGGGGAGCAGCGGAAACCGCTCCCCCCGCTCCGCAATAT
CAACCGCCACACGGTGCGAGTAGCCCAAAGCGGCGCCGACCACGCAACCC
CCAAGAGAGGAGCCGGCCTCCGGTCGGCCTCGCCGTCCCCGCCATCGACA
TCCCACGGCAGGCCGGACGGCCAGAGGCGCAACAAGCTCTCTCCGATGGG
GAAATTTCGGAGCGGCGTGTTCACGGTGGGAGCCGCGAAGGCCCTGGACG
ATCTGCAGCTACCGGGAGGCCGTGCCAGCGGCGGTGGTGGAAGCTCAAGC
GCAGCGGCGGGCGGCGGCGGAGCCGGGGGGGCGGGGCCGACGTTAGGGTC
CGCCCAAGAGGCAGCGTTGGTGATACAGCGGAAGGACGGCAGAGAGCGGC
ATCCCGGCCCATCATTGGGAAGCATTGGCGAGCGCGGGACCGCATCATCG
GTCATCCGTTCGCTAAAGACACACAGGACGGCAGAGAGCGGCATCCCGGC
CCATCATTGGGAAGCATTGGCGAGCGCGGGACCGCATCATCGGTCATCCG
TTCGCTAAAGACACACAGGAGCGGCCCGTCACTGGTGACCCCGCACATCT
GCATAGGCGCAAGAGAAGATGCCAGGAATCTCCAAGCCCTGAAAGAGCTG
GGAGTCACCCACGTCCTGAACTGCGCCAAGCAGCTGGCGAGCTCACACCC
GAGGGAGTTCGTTCACGCGCGGCTGGAGCTCATAGGAGCGGCCCGTCACT
GGTGACCCCGCACATCTGCATAGGCGCAAGAGAAGATGCCAGGAATCTCC
AAGCCCTGAAAGAGCTGGGAGTCACCCACGTCCTGAACTGCGCCAAGCAG
CTGGCGAGCTCACACCCGAGGGAGTTCGTTCACGCGCGGCTGGAGCTCAT
AGACACAAGCGAGGAAGAGCTAGCACCGTTCCAGAAGGCGGGGATTTCCT
TCCTTCGACAGGTCGAGGGGTGCGGTGGCCGAGCTCTCGTCCACTGCATC
GCGGGACACAAGCGAGGAAGAGCTAGCACCGTTCCAGAAGGCGGGGATTT
CCTTCCTTCGACAGGTCGAGGGGTGCGGTGGCCGAGCTCTCGTCCACTGC
ATCGCGGGATGCTCTCGATCAGTGTCGATAGTGCTGCTGCACCTGATGAA
GAGCCATCGAATCCGACTCAAGAGCGCGTACGACCACGTGAGGGCCTACC
GAATGGTGGCCCAACCCAACGAGGGGTTTCGGTTCCAGCTGGCGACAACG
GAGATGCTCTCGATCAGTGTCGATAGTGCTGCTGCACCTGATGAAGAGCC
ATCGAATCCGACTCAAGAGCGCGTACGACCACGTGAGGGCCTACCGAATG
GTGGCCCAACCCAACGAGGGGTTTCGGTTCCAGCTGGCGACAACGGAGGT
GAAGATATTTGGGTCCTCTTCCGTCAGCCGAGACGGGGAGAGCATCTGGA
ACTTTTACCGGTGGAACGAGGTGAAGCAGGGCATTCCTTACCACGCCATC
GACCCACCACAGGCCTGCGGCGGCTGCACCGTGGCATAGGTGAAGATATT
TGGGTCCTCTTCCGTCAGCCGAGACGGGGAGAGCATCTGGAACTTTTACC
GGTGGAACGAGGTGAAGCAGGGCATTCCTTACCACGCCATCGACCCACCA
CAGGCCTGCGGCGGCTGCACCGTGGCATAG
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