mRNA_L-elsbetiae_contig10102.158.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig10102.158.1 vs. uniprot
Match: D8LS41_ECTSI (Uroporphyrinogen-III synthase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LS41_ECTSI) HSP 1 Score: 359 bits (922), Expect = 2.630e-121 Identity = 210/295 (71.19%), Postives = 225/295 (76.27%), Query Frame = 1 Query: 1 GAEVALTREAGKNGKLAALLAEAGISSVEVPCIAHKDGVDLPLLPAALADPGLSYVVVTSPEAAKVFLAGWTDAGEP--PVQVACVGKATGDALRAKGVTPVFTPSKATGETLAAEIPILPPTADVNNERRC--------------------------RVLYPASAKAQKTLETGLQVRGFDVRRLNTYDTVPASWNEDAKAAAAAATVAAFGSPSAVKTWAARMGGAEMPAAEVGGA-------------GALAACIGETSARACREAGWPESAIFYPEKPGMEGWAKAVGDAL 762 GAEVALTREAGKNGKLA LL +AGISSVEVPCIAH+DG DLPLLPAALADPGL+YVVVTSPEAAKVFLAGW AG P PV VACVGKATGDALRA GV+PVFTPSKATGETLAAEIP LPP+A ++ RVLYPASAKAQ TLE+GL+ RGF+VRRLNTYDTVPA+W+E A+AAAA A+VAAFGSPSAVKTWAARMG + AA V GALAACIGETSARACREAGW ESAIFYPEKPGMEGWAKAVG AL Sbjct: 72 GAEVALTREAGKNGKLAKLLTDAGISSVEVPCIAHQDGPDLPLLPAALADPGLAYVVVTSPEAAKVFLAGWAKAGVPGVPVPVACVGKATGDALRAGGVSPVFTPSKATGETLAAEIP-LPPSAPADDTXXXXXXXXXXXXXXXXXXXXXXXXXXXGPRVLYPASAKAQNTLESGLRARGFEVRRLNTYDTVPATWDESAEAAAAGASVAAFGSPSAVKTWAARMG---VVAAGVXXXXXXXXXXXXXXXXGALAACIGETSARACREAGWAESAIFYPEKPGMEGWAKAVGQAL 362
BLAST of mRNA_L-elsbetiae_contig10102.158.1 vs. uniprot
Match: A0A835YHW0_9STRA (Uroporphyrinogen-III synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YHW0_9STRA) HSP 1 Score: 257 bits (656), Expect = 2.290e-82 Identity = 150/251 (59.76%), Postives = 172/251 (68.53%), Query Frame = 1 Query: 10 VALTREAGKNGKLAALLAEAGISSVEVPCIAHKDGVDLPLLPAALADPGLSYVVVTSPEAAKVFLAGWTDAGEPPVQVACVGKATGDALRAKGVTPVFTPSKATGETLAAEIPILPPTADVNNERRCRVLYPASAKAQKTLETGLQVRGFDVRRLNTYDTVPASWNEDAKAAAAAATVAAFGSPSAVKTWAARMGGAEMPAAEVGGAGALAACIGETSARACREAGWPESAIFYPEKPGMEGWAKAVGDAL 762 VALTREAG NGKL ALL GI+ VEVPCIA DG D LP LA YV+VTSPE+AKVFL W A P V VACVG ATGDALRA+G+ P FTPS+A GE LAAEIP LPP+A V RVLYPAS +A T++ GL+ RGF V RLNTYDT A+W++ + AA A VAAFGSPSAVK W + MG E A AACIG TSA+A + AGW + IF+PEKPGM GWA+AV +AL Sbjct: 36 VALTREAGNNGKLEALLVAKGINCVEVPCIAFTDGPDSAQLPQHLASGAYDYVIVTSPESAKVFLQAWDAAERPNVSVACVGTATGDALRARGLEPAFTPSRAYGEDLAAEIP-LPPSAAVGEGGAPRVLYPASTRAPGTVQEGLEARGFHVVRLNTYDTGAAAWSDADLSNAARAAVAAFGSPSAVKAWVSHMG------VEA----AAAACIGVTSAKAAKAAGWADDRIFWPEKPGMPGWAQAVEEAL 275
BLAST of mRNA_L-elsbetiae_contig10102.158.1 vs. uniprot
Match: A0A7S0HHZ2_9CRYP (Uroporphyrinogen-III synthase n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0HHZ2_9CRYP) HSP 1 Score: 228 bits (581), Expect = 2.050e-70 Identity = 136/251 (54.18%), Postives = 163/251 (64.94%), Query Frame = 1 Query: 10 VALTREAGKNGKLAALLAEAGISSVEVPCIAHKDGVDLPLLPAALADPGLSYVVVTSPEAAKVFLAGWTDAGEPPVQVACVGKATGDALRAKGVTPVFTPSKATGETLAAEIPILPPTADVNNERRCRVLYPASAKAQKTLETGLQVRGFDVRRLNTYDTVPASWNEDAKAAAAAATVAAFGSPSAVKTWAARMGGAEMPAAEVGGAGALAACIGETSARACREAGWPESAIFYPEKPGMEGWAKAVGDAL 762 VALTRE GKN KL +L+E GI +VE+PCIA + G D LP AL + YVVVTSPEAA VFL W +AGEP + VACVG T AL+ G+ PVF PSKATG+TLA E+P R RVLYPASAKA+ ++ GL RGF V RLNTYDTV A+W++ A+A V A SPSAVKTWA R+G + AACIGETSA AC+E G+ +F+PE PG+ GWA+AV DAL Sbjct: 88 VALTRELGKNSKLEKVLSEKGIRTVELPCIAFEAGTDAETLPKALQEEW-EYVVVTSPEAASVFLDAWREAGEPSLPVACVGAGTKQALQEGGIEPVFMPSKATGKTLADELP--------GPRRSGRVLYPASAKARTEVQGGLTARGFSVTRLNTYDTVSATWSDKELQMGASAAVIALASPSAVKTWAERLGTKQ-----------YAACIGETSAAACKELGFEH--VFWPESPGILGWAQAVHDAL 316
BLAST of mRNA_L-elsbetiae_contig10102.158.1 vs. uniprot
Match: L1JFY6_GUITC (Uroporphyrinogen-III synthase n=2 Tax=Guillardia theta TaxID=55529 RepID=L1JFY6_GUITC) HSP 1 Score: 226 bits (575), Expect = 2.340e-70 Identity = 135/251 (53.78%), Postives = 164/251 (65.34%), Query Frame = 1 Query: 10 VALTREAGKNGKLAALLAEAGISSVEVPCIAHKDGVDLPLLPAALADPGLSYVVVTSPEAAKVFLAGWTDAGEPPVQVACVGKATGDALRAKGVTPVFTPSKATGETLAAEIPILPPTADVNNERRCRVLYPASAKAQKTLETGLQVRGFDVRRLNTYDTVPASWNEDAKAAAAAATVAAFGSPSAVKTWAARMGGAEMPAAEVGGAGALAACIGETSARACREAGWPESAIFYPEKPGMEGWAKAVGDAL 762 VALTRE GKN KL L+E G+ +VE+PCIA + G+D LP+AL + YVVVTSPEAA VFL W A +P +QVACVG T AL+ G+ PVF PSKATG+TLA E+P + RVLYPASAKA+ ++ GL RGF V RLNTYDTV A+W+E AA+A V A SPSAVKTWA R+G + AACIGETSA AC+E G+ +F+PE PG+ GWA+AV DAL Sbjct: 24 VALTRELGKNLKLEKALSEKGVRTVELPCIAFEAGIDSDSLPSALKE-DWEYVVVTSPEAASVFLDAWRLASQPSLQVACVGTGTKQALQEGGIEPVFMPSKATGKTLADELP--------GPQGNGRVLYPASAKARTEVQGGLTARGFTVTRLNTYDTVSATWSEQELQMAASAAVVALASPSAVKTWAERLGTKQ-----------YAACIGETSASACKELGFEH--VFWPESPGIPGWAQAVHDAL 252
BLAST of mRNA_L-elsbetiae_contig10102.158.1 vs. uniprot
Match: A0A7S2PU27_9STRA (Uroporphyrinogen-III synthase n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PU27_9STRA) HSP 1 Score: 225 bits (574), Expect = 2.200e-69 Identity = 134/265 (50.57%), Postives = 162/265 (61.13%), Query Frame = 1 Query: 10 VALTREAGKNGKL-AALLAEAGISSV------------EVPCIAHKDGVDLPLLPAALADPGLSYVVVTSPEAAKVFLAGWTDAGEPPV-QVACVGKATGDALRAKGVTPVFTPSKATGETLAAEIPILPPTADVNNERRCRVLYPASAKAQKTLETGLQVRGFDVRRLNTYDTVPASWNEDAKAAAAAATVAAFGSPSAVKTWAARMGGAEMPAAEVGGAGALAACIGETSARACREAGWPESAIFYPEKPGMEGWAKAVGDAL 762 +ALTRE GKNGKL AL + + I + E+PCIAH DG D +L L+ YV +TSPEAAKVF W D G P V VA VGKAT +AL+A G+ F PSKAT TL E+P L N R +LYPASAKAQ TL+ GL+ RGF V RLNTYDTV A+W + ++ A + TVA F SPSAVK W + P A LAACIGETS AC++ GW E IFYPEKPG++GWA++V +AL Sbjct: 63 IALTREEGKNGKLNKALQSNSNIKQIISSSSGSAMEVNEIPCIAHADGPDSDILGKTLSSSDFDYVAITSPEAAKVFATAWIDEGRPKVGSVAAVGKATQEALKAYGIDVAFVPSKATAATLVKELPTLEEAT--NEGRSTSLLYPASAKAQDTLQNGLEERGFIVTRLNTYDTVTATWTPEEESLAKSTTVACFASPSAVKAWVKNTAQLDCPRA-------LAACIGETSFAACKKNGWKEEDIFYPEKPGIDGWAESVANAL 318
BLAST of mRNA_L-elsbetiae_contig10102.158.1 vs. uniprot
Match: A0A7S4JXA4_9STRA (Uroporphyrinogen-III synthase n=3 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JXA4_9STRA) HSP 1 Score: 225 bits (573), Expect = 2.840e-69 Identity = 140/261 (53.64%), Postives = 165/261 (63.22%), Query Frame = 1 Query: 10 VALTREAGKNGKLA-ALLAEAGISSV------EVPCIAHKDGVDLPLLPAALADPGLSYVVVTSPEAAKVFLAGWTDAGEPPV-QVACVGKATGDALRAKGVTPVFTPSKATGETLAAEIPILPPTADVNNERR-CRVLYPASAKAQKTLETGLQVRGFDVRRLNTYDTVPASWNEDAKAAAAAATVAAFGSPSAVKTWAARMGG-AEMPAAEVGGAGALAACIGETSARACREAGWPESAIFYPEKPGMEGWAKAVGDAL 762 VALTRE GKN KL ALL+ I E+PCI H DG D L L + YV VTSPEAA+V + W AG P + ++A VGKATG+AL A G+ F PSKAT +TL E LPP+ D E R +LYPASAKA+ TL+ GL+ RGFDV RL+TYDTVPASW+ED A A VA F SPSAV W +GG E + +V AACIGETSA+ CR+ GW E I+YPEKPG+EGWA AV DAL Sbjct: 62 VALTREDGKNSKLLRALLSHPRIGDAIPVDIEEIPCIEHADGDDYDRLGPTLKERSFDYVAVTSPEAARVLASAWEGAGRPSMGKIAAVGKATGEALIALGIEVDFVPSKATAKTLVEE---LPPSDDATAEGRPTTLLYPASAKARPTLQNGLEGRGFDVTRLDTYDTVPASWSEDRTDLAREAGVACFASPSAVNAWVENLGGEGEGCSGDV-----AAACIGETSAQGCRDMGWDEGDIYYPEKPGVEGWANAVADAL 314
BLAST of mRNA_L-elsbetiae_contig10102.158.1 vs. uniprot
Match: B8BVT8_THAPS (Uroporphyrinogen-III synthase n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BVT8_THAPS) HSP 1 Score: 219 bits (559), Expect = 4.490e-67 Identity = 135/264 (51.14%), Postives = 159/264 (60.23%), Query Frame = 1 Query: 10 VALTREAGKNGKLA-ALLAEAGISSV-----------EVPCIAHKDGVDLPLLPAALADPGLSYVVVTSPEAAKVFLAGWTDAGEPPV-QVACVGKATGDALRAKGVTPVFTPSKATGETLAAEIPILPPTADVNNERRCRVLYPASAKAQKTLETGLQVRGFDVRRLNTYDTVPASWNEDAKAAAAAATVAAFGSPSAVKTWAARMGGAEMPAAEVGGAGALAACIGETSARACREAGWPESAIFYPEKPGMEGWAKAVGDAL 762 VALTRE GKN KL ALL+ I + E+PCI H DG D L LA YV +TSPEAAKV + W +AG P + +VA VGKAT ++L+ G+ F PSKAT TL E+P+ A R + YPAS KA TL+ GL+ RGFDV RLNTYDTVPASW+E+ A +A VA F SPSAVK W G PA A AACIGETSA ACR+ W ES IFYPEKPG++GWA +V DAL Sbjct: 67 VALTREEGKNDKLRKALLSNEHIQQLSQSSGVAVDIHEIPCIEHADGPDTDKLVPTLASTQFDYVAITSPEAAKVLVNAWIEAGRPQLGKVAAVGKATQESLKEFGIEVAFVPSKATAATLVKELPLS--DAATKEGRSSTLFYPASNKAADTLQNGLEERGFDVMRLNTYDTVPASWDEEQTLLAQSANVACFASPSAVKAWLKNTDGMNKPAR------AKAACIGETSAEACRKNQWDESDIFYPEKPGVDGWAVSVADAL 322
BLAST of mRNA_L-elsbetiae_contig10102.158.1 vs. uniprot
Match: A0A1Z5JNA0_FISSO (Uroporphyrinogen-III synthase n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JNA0_FISSO) HSP 1 Score: 208 bits (529), Expect = 5.440e-63 Identity = 126/252 (50.00%), Postives = 147/252 (58.33%), Query Frame = 1 Query: 13 ALTREAGKNGKLAALLAEAGISSVEVPCIAHKDGVDLPLLPAALADPGLSYVVVTSPEAAKVFLAGW---TDAGEPPVQVACVGKATGDALRAKGVTPVFTPSKATGETLAAEIPILPPTADVNNERRCRVLYPASAKAQKTLETGLQVRGFDVRRLNTYDTVPASWNEDAKAAAAAATVAAFGSPSAVKTWAARMGGAEMPAAEVGGAGALAACIGETSARACREAGWPESAIFYPEKPGMEGWAKAVGDA 759 A TRE GKN +L + ++ VE+PCIAH DG D L L YV +TSPEAA+V + W T PP V VGKAT DAL+A G+T F PSKAT E L E+P+ + ++ RVLYPAS +AQ TL+ GL RGF V RLNTYDTV A WNE AA +A F SPSAVK W LAACIGETSA+ACRE GW E IFYP+KPGMEGW AV +A Sbjct: 50 AATREQGKNEQLMKGIRAIHLNPVELPCIAHADGPDFSSLQETLETNPWDYVTITSPEAARVLSSAWQHCTWQTTPPPAVVAVGKATEDALQASGITVTFCPSKATAEVLVQELPL-------PSSQQPRVLYPASVRAQTTLQDGLTQRGFTVVRLNTYDTVTAQWNEHETNMAAQVQIACFASPSAVKGWLLNTENNHQ---------VLAACIGETSAKACRERGWNEEHIFYPDKPGMEGWVDAVAEA 285
BLAST of mRNA_L-elsbetiae_contig10102.158.1 vs. uniprot
Match: A0A7S2EAC0_TRICV (Uroporphyrinogen-III synthase n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EAC0_TRICV) HSP 1 Score: 209 bits (533), Expect = 1.490e-62 Identity = 136/266 (51.13%), Postives = 162/266 (60.90%), Query Frame = 1 Query: 4 AEVALTREAGKNGKLA-ALLAEAGISSV------EVPCIAHKDGVDLPLLPAALADPG----LSYVVVTSPEAAKVFLAGWTDAGEPPV-QVACVGKATGDALRAKGVTPVFTPSKATGETLAAEIPILPPTADVNNERRCR-VLYPASAKAQKTLETGLQVRGFDVRRLNTYDTVPASWNEDAKAAAAAATVAAFGSPSAVKTWAARMGGAEMPAAEVGGAGALAACIGETSARACREAGWPESAIFYPEKPGMEGWAKAVGDAL 762 A VALTRE GKN KL ALL+ I E+PCIAH DG D +L AL+ G YV VTSPEAA+V A W AG P + +V VGKAT +AL +G+ F PSKAT +TL E LP + D E R +LYPASAKA+KTLE GL+ RGF V RL+TYDT+PA+W + K A VA F SPSA+ W + E G AACIGETSA+ CR+ GW E IFYPEKPG++GWA+AV DAL Sbjct: 113 AVVALTREDGKNAKLLRALLSHPRIGDAIPVDLEEIPCIAHADGPDSDMLGPALSGKGGFGAFDYVAVTSPEAARVLAAAWEAAGRPDLGEVVAVGKATEEALLREGIRVGFVPSKATAKTLVEE---LPESGDATMEGRLTTLLYPASAKAKKTLEQGLEERGFVVTRLDTYDTIPATWTPEKKNKADLVRVACFASPSAITGWLQNLEDTEGGRR---GNTIAAACIGETSAQMCRDMGWDEGNIFYPEKPGVDGWAEAVADAL 372
BLAST of mRNA_L-elsbetiae_contig10102.158.1 vs. uniprot
Match: A0A1Z5JYL0_FISSO (Uroporphyrinogen-III synthase n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JYL0_FISSO) HSP 1 Score: 207 bits (526), Expect = 1.540e-62 Identity = 126/250 (50.40%), Postives = 148/250 (59.20%), Query Frame = 1 Query: 13 ALTREAGKNGKLAALLAEAGISSVEVPCIAHKDGVDLPLLPAALADPGLSYVVVTSPEAAKVFLAGWTDAGEP-PVQVACVGKATGDALRAKGVTPVFTPSKATGETLAAEIPILPPTADVNNERRCRVLYPASAKAQKTLETGLQVRGFDVRRLNTYDTVPASWNEDAKAAAAAATVAAFGSPSAVKTWAARMGGAEMPAAEVGGAGALAACIGETSARACREAGWPESAIFYPEKPGMEGWAKAVGDA 759 A TRE GKN +L + + VE+PCIAH DG D L L + YV +TSPEAA+V + W P P V VGKAT DAL+A G+ F PSKAT E L E+P+ +++ +VLYPAS +AQ TL+ GL RGF V RLNTYDTV A WNE AA +A F SPSAVK W + E A LAACIGETSA+ACRE GW E IFYPEKPGMEGW AV +A Sbjct: 50 AATREQGKNEQLMKGIRGIHLHPVELPCIAHADGPDFSSLQETLQNNHWDYVTITSPEAARVLSSAWQHCTWPTPPAVVAVGKATEDALQAAGIAVAFCPSKATAEVLVQELPL-----PSQQQQQPKVLYPASVRAQTTLQDGLTQRGFTVVRLNTYDTVTAHWNEHETVQAAQVQIACFASPSAVKGW--------LLNTENNNA-VLAACIGETSAKACRERGWDEEHIFYPEKPGMEGWVNAVAEA 285 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10102.158.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig10102.158.1 >prot_L-elsbetiae_contig10102.158.1 ID=prot_L-elsbetiae_contig10102.158.1|Name=mRNA_L-elsbetiae_contig10102.158.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=254bp GAEVALTREAGKNGKLAALLAEAGISSVEVPCIAHKDGVDLPLLPAALADback to top mRNA from alignment at L-elsbetiae_contig10102:5747..6831- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig10102.158.1 ID=mRNA_L-elsbetiae_contig10102.158.1|Name=mRNA_L-elsbetiae_contig10102.158.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1085bp|location=Sequence derived from alignment at L-elsbetiae_contig10102:5747..6831- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig10102:5747..6831- >mRNA_L-elsbetiae_contig10102.158.1 ID=mRNA_L-elsbetiae_contig10102.158.1|Name=mRNA_L-elsbetiae_contig10102.158.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1524bp|location=Sequence derived from alignment at L-elsbetiae_contig10102:5747..6831- (Laminarionema elsbetiae ELsaHSoW15)back to top |