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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Ec32 ortholog description | Hypothetical protein |
| Ec32 ortholog | Ec-27_005520.1 |
| Exons | 4 |
| Model size | 1306 |
| Cds size | 573 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622816776.7696898-UTR-L-elsbetiae_contig7:71197..71380 | 1622816776.7696898-UTR-L-elsbetiae_contig7:71197..71380 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig7 71198..71380 + |
| 1691683804.9103177-UTR-L-elsbetiae_contig7:71197..71380 | 1691683804.9103177-UTR-L-elsbetiae_contig7:71197..71380 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig7 71198..71380 + |
| 1622816776.8256764-UTR-L-elsbetiae_contig7:74246..74796 | 1622816776.8256764-UTR-L-elsbetiae_contig7:74246..74796 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig7 74247..74796 + |
| 1691683804.9686103-UTR-L-elsbetiae_contig7:74246..74796 | 1691683804.9686103-UTR-L-elsbetiae_contig7:74246..74796 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig7 74247..74796 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622816776.780056-CDS-L-elsbetiae_contig7:71380..71384 | 1622816776.780056-CDS-L-elsbetiae_contig7:71380..71384 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig7 71381..71384 + |
| 1691683804.9242926-CDS-L-elsbetiae_contig7:71380..71384 | 1691683804.9242926-CDS-L-elsbetiae_contig7:71380..71384 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig7 71381..71384 + |
| 1622816776.7916965-CDS-L-elsbetiae_contig7:73034..73248 | 1622816776.7916965-CDS-L-elsbetiae_contig7:73034..73248 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig7 73035..73248 + |
| 1691683804.9351015-CDS-L-elsbetiae_contig7:73034..73248 | 1691683804.9351015-CDS-L-elsbetiae_contig7:73034..73248 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig7 73035..73248 + |
| 1622816776.8039386-CDS-L-elsbetiae_contig7:73510..73672 | 1622816776.8039386-CDS-L-elsbetiae_contig7:73510..73672 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig7 73511..73672 + |
| 1691683804.9483418-CDS-L-elsbetiae_contig7:73510..73672 | 1691683804.9483418-CDS-L-elsbetiae_contig7:73510..73672 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig7 73511..73672 + |
| 1622816776.8152235-CDS-L-elsbetiae_contig7:74053..74246 | 1622816776.8152235-CDS-L-elsbetiae_contig7:74053..74246 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig7 74054..74246 + |
| 1691683804.9571025-CDS-L-elsbetiae_contig7:74053..74246 | 1691683804.9571025-CDS-L-elsbetiae_contig7:74053..74246 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig7 74054..74246 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig7.15791.1 >prot_L-elsbetiae_contig7.15791.1 ID=prot_L-elsbetiae_contig7.15791.1|Name=mRNA_L-elsbetiae_contig7.15791.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=191bp
MARYNGGHKLRERRCNMAAGDPRSRFSKMDTRRHTQQHGQQGRATSHVAL
AIGPLQVSSVAVRPFAHGEIYRRPPQRISGWRPLMAPAAALSSSLAPLEP
QGFAPRLLNKQALCVGNGVSRGASITSQANALRQKQLQFRHRVYQSTHKS
AGLARLLTVTRDDGSSVTTSGTAAGKDSAVSTGGSRRRAQ* back to topmRNA from alignment at L-elsbetiae_contig7:71198..74796+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_L-elsbetiae_contig7.15791.1 ID=mRNA_L-elsbetiae_contig7.15791.1|Name=mRNA_L-elsbetiae_contig7.15791.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3599bp|location=Sequence derived from alignment at L-elsbetiae_contig7:71198..74796+ (Laminarionema elsbetiae ELsaHSoW15)
ATCGAGTCATGGCCGCCAAACTCCCCACCCCACCCTTCGGCAGCGCCGGC
AGCGCCGAGACCTCGATGGCACGATAGCAGCGGACCTCCACCTAGCCAGG
GGTGGGAAGAGAGCTACCCTGCTGGCGATGTCAGCAGCAACGAGAGCTGC
GATGGATGGGGAAGGGGTCATTTCTCTCCAGGTATGGGTTGCGTTGTGAA
AAAATGGTTGTGTTTGAAGGGTAAAAGTCTGTCAACTACTGTTGTCAAAC
GGGCATCAGCTAGATACGTAGACTACATAGACTAGTCTTATCGACGTAGA
TATCACGGCCCGGTACACATTACGGACACCCACTTCTGGGTGTCATGTGC
TGCCATGCGGTATGCCAATCAAGCAAGGTATTGCTCGCAGCGATTGCATT
GTCGCATCAAAGAACCTTCGTGCAACCTCGAGAAATGAGCCTTCAAGTAC
ATATGTACAAAATATTAATATTCGGACCGAGAACAGAAACGGGCCGAAGA
GATTGATTGGATTCGCTCTCGTATAATATTGTACCCAGCCTTTATATACC
CCCTTGCTCGATTCCATGCGTTTTGTGTGATGTTACAGAGTGTACGAGCG
CGAATCTGCTGTTATTGAATGAGTGTTTTTCGTTGTACGTTGCTGTATCA
AACACGACGTGGTGGGCCGCCCGGCAGCGTGAGGACCGCCCCATCAGTGT
TGTTCGTTCGCGGGTGTGTGTGTCCTTCCCATTTATTTTGGCGACAGTCC
CCCCAAGTGGGTGGCGGCAGATAATTACCCCAGAGGGGCTCGGCAGATGT
GATACGGTTCGCAGAACTCCTCCATATATCACTGAGATACAGACCCACTC
GGGGCACCTTTAGGCAGAAATATCTCGGCTCGGGGAGCTCGAACACAGAT
TCTGACGGTTCGACTACTGAGCAGTAGGCAGCTGTAAGAGGAAATACCGC
TGCAGTGGTCGCGAACCTTTGTTGGTCAATTGATATCAGCCCTCGCGAAA
ATTGCTGCCAGAGAATATGTGCCGATACCACACAAGATAACACCTCCCCT
CGGAGAGAGAACCTGGTTTCCACTTGGAAATAATTGTAAAAATACGCTCC
CACGCGATCACCGTTTTCTTACGCCACCGAGCTAGAACACATTAATGGAC
GGGTGATACGAAAAGATGGTGACAGTAGTTGTGTAGTCTTTAATGCCCGT
TTCCAGTCGTAGACAATTTGGTCAATTGATTGACGCCCTCCAAAACGCAG
CAATGCAGCCAGTCAGCACCGGAATTTCGGGTGTCTTTTGACCCTCGCAC
CAGGCACAGACAGCAAACATAGAAGCTAAACCTATAAAACCCAGTACCAC
ACACAGAGTGCGTGATACTATGGATTTCAGTCTGTTTTTATGGCTCAGAT
TTGGCGGGATGGGCTGCAGCGATAATCTGAGGTGCCGGCGGAGTACCCTG
GGATGCTCGAAGGAATTTCTAAACTCTAAAAACGCCTGATTCTCTCTCAG
GGCATCCCTGGAAAAGGTTTTTCTGCCTCTCGAGCCCCACACCCCGCCGT
TTCCCTGCTTTCTTCAGTGGTACTGATCTGCCTAGACATAAAAGCTACCG
GATAGCGTTCTCAGAAGCCAAAACTGTGTGCTACAGCTTTCGAAGCTCCG
AAAAAGGTCGACAAAATGTATTGCGGGCTCCCCAAGCGTCACACCACTGC
CATTGCATGGTTTGCATCCCTGTTAAAATTCACAAGACTTTCAACGAGGT
ATTTACTGCCGGTTTTGTGCGTGCTCCTTCCTGGTGTTCTCCGTCGGCCT
GGGAAACTTGTTGACTGATACCTATTCCCGGCTGAAGCACGATATAATGG
GGGACACAAGCTGCGGGAACGTCGCTGCAACATGGCGGCGGGGGATCCAC
GGAGCCGTTTCAGCAAAATGGACACCCGAAGGCATACGCAACAGCATGGA
CAGCAAGGGCGAGCGACTTCCCACGTGGCTCTCGCTATCGGCCCTTTGCA
AGTGTCGTCGGTGGCCGTGCGGCCCTTTGCGCACGGAGAAATCTACCGAA
GGTGGGCACAGCAGGTGTCTTATCTTATGTCACCTACGGTTAGTACATAC
AAACATGGGTTCACCCATACGCTAGTACGATGCCCAGGTTGTGAAAGGCG
CGTTGCTTAGACTAAGTGGCTGGACACGTTTGGAACATGCCTGTGGACAC
GCTTCCCGGACTTTATCGCCTTCGTGTATGTGTGGAGCGTGAACCATGAC
ATTATAAGAGAAACAAGGACGTATTGAGCGCCGCCCACCCGTCCTATACT
GGTTGATCGGCAGGCCACCTCAACGGATTTCGGGGTGGAGACCGCTGATG
GCCCCTGCAGCAGCGCTTTCTTCCTCGCTGGCCCCGCTCGAACCCCAGGG
TTTCGCCCCCCGACTCCTCAACAAGCAAGCCCTTTGCGTCGGCAACGGAG
TATCTCGGGGAGCTTCGATCACGAGGTGCACCATTTCACCGTGTGGGTAG
ATGCCGGCGGCTTTGGCCGCCTGATTTACGAGTGTTTGCGGCCGCCGAAC
GGACGTGGTTTGTCGGGAAATAGATCTTGAGCGTACCAGCAACTCTTGCA
AAGTCTTGGCGGCACACATGCGGGGGTAGCACTTGTTGAGCCCAACTTTG
CTGAACTCTGCGCGCGCCTTCTGGCCCGCAACTGCACATATGGTACCTGT
CACCACGGCATAGCGTCAAACAAGATCAATTCATGGTGAATGCGACATTG
AGTTCTAATTAAATAGTAATACGCACGCACCGTCACTCGGCCACATCCTG
AAGACGCACGTTTTCCCGTTTCTGATGCTCCCCCGTCTACCTAATCCGCG
CCTCAGCCAAGCCAACGCTTTGAGACAGAAGCAGCTACAGTTCCGACATC
GGGTGTACCAGAGCACGCACAAGTCAGCTGGTTTGGCGCGGTTGCTAACC
GTCACGAGGGACGACGGCTCGTCCGTCACTACTAGCGGCACTGCTGCGGG
GAAAGATTCGGCCGTTTCGACCGGTGGTAGTCGCCGCAGGGCCCAATAAG
GCAGAAATCGAGGACTCTTTACAGATTGTAGTACAGAAGCATCCTTCGCT
TCGTTTTATTTTTTCACGCCAACAGACCGTCACGTACAACACCACACACA
CAGTAAGGTTTGAAACGAGGTCCGGCCGCATCCATAAGTGAGGGTGAAGA
TCTCACAACGTTGCTGCCGGTATATGTTACGATGTCAAGTCCAACGGGAT
GGGTTAGGGAAGTTGTAGAACGTCAATTCTTGAAAGGTGGTGATTGCTGT
GAGTGGGACAGGCCAGCTCGAACCCGCTCATAATCGCGTGCAGCGCCTTT
GATTTTGCTCTTTGATGGCTCTGGACAACCAGAAAATACCACTTTCTTTT
CGAGGTCGCTGGTTTTTCTTGGGGGTGGAATGCTCAGTTTGTAGGCCGCA
AGCTTCGGGTCCATTTTTGTTTTTTTGTCAAGTATCTATGTTGCCCGTTT
TTTAGGGCAAGTTATCCTATGGCCACGGGAATCGACCGCGTCAGCCTTGA
ATTAGTACGGACTTATGGAGGTACTGGATAGAGAGATCGGAACGGTTTT back to topCoding sequence (CDS) from alignment at L-elsbetiae_contig7:71198..74796+ >mRNA_L-elsbetiae_contig7.15791.1 ID=mRNA_L-elsbetiae_contig7.15791.1|Name=mRNA_L-elsbetiae_contig7.15791.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1146bp|location=Sequence derived from alignment at L-elsbetiae_contig7:71198..74796+ (Laminarionema elsbetiae ELsaHSoW15)
ATGGATGGCACGATATAATGGGGGACACAAGCTGCGGGAACGTCGCTGCA
ACATGGCGGCGGGGGATCCACGGAGCCGTTTCAGCAAAATGGACACCCGA
AGGCATACGCAACAGCATGGACAGCAAGGGCGAGCGACTTCCCACGTGGC
TCTCGCTATCGGCCCTTTGCAAGTGTCGTCGGTGGCCGTGCGGCCCTTTG
CGCACGGAGAAATCTACCGAAGCACGATATAATGGGGGACACAAGCTGCG
GGAACGTCGCTGCAACATGGCGGCGGGGGATCCACGGAGCCGTTTCAGCA
AAATGGACACCCGAAGGCATACGCAACAGCATGGACAGCAAGGGCGAGCG
ACTTCCCACGTGGCTCTCGCTATCGGCCCTTTGCAAGTGTCGTCGGTGGC
CGTGCGGCCCTTTGCGCACGGAGAAATCTACCGAAGGCCACCTCAACGGA
TTTCGGGGTGGAGACCGCTGATGGCCCCTGCAGCAGCGCTTTCTTCCTCG
CTGGCCCCGCTCGAACCCCAGGGTTTCGCCCCCCGACTCCTCAACAAGCA
AGCCCTTTGCGTCGGCAACGGAGTATCTCGGGGAGCTTCGATCACGAGGC
CACCTCAACGGATTTCGGGGTGGAGACCGCTGATGGCCCCTGCAGCAGCG
CTTTCTTCCTCGCTGGCCCCGCTCGAACCCCAGGGTTTCGCCCCCCGACT
CCTCAACAAGCAAGCCCTTTGCGTCGGCAACGGAGTATCTCGGGGAGCTT
CGATCACGAGCCAAGCCAACGCTTTGAGACAGAAGCAGCTACAGTTCCGA
CATCGGGTGTACCAGAGCACGCACAAGTCAGCTGGTTTGGCGCGGTTGCT
AACCGTCACGAGGGACGACGGCTCGTCCGTCACTACTAGCGGCACTGCTG
CGGGGAAAGATTCGGCCGTTTCGACCGGTGGTAGTCGCCGCAGGGCCCAA
TAACCAAGCCAACGCTTTGAGACAGAAGCAGCTACAGTTCCGACATCGGG
TGTACCAGAGCACGCACAAGTCAGCTGGTTTGGCGCGGTTGCTAACCGTC
ACGAGGGACGACGGCTCGTCCGTCACTACTAGCGGCACTGCTGCGGGGAA
AGATTCGGCCGTTTCGACCGGTGGTAGTCGCCGCAGGGCCCAATAA back to top
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