prot_L-elsbetiae_contig7.15790.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig7.15790.1
Unique Nameprot_L-elsbetiae_contig7.15790.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length723
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig7.15790.1 vs. uniprot
Match: D8LB22_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LB22_ECTSI)

HSP 1 Score: 483 bits (1243), Expect = 3.560e-158
Identity = 381/732 (52.05%), Postives = 445/732 (60.79%), Query Frame = 0 
Query:    1 MTDFKKWDKFDADAAEEEVERKAGDXXXXXRRIAEEQRALKSCQDRAARLKSEAVVRALKAKRGSRRRSPAVTTAISGNSNSQDSSGPLDGKPRDDPASLARASADEAEAILTGLRAGLSLRDEVVAAAEAGELHRGVRKARECLVQLDAAQALLLKTAA---PTDCGGDDSHAQARAGGSGSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSGGRAGARCATEGGAAGAGTDESARAPGGRREEEESARKEMAGALEILRRAKAACRVAEGACLRRGGRAAESTETLRSFLFEARAGCVPAWVARGESFLALDAPLLAGLHFDRALGLDSGCAAAAKHKESLRRFLALEGSPSSEPQAATVAAAAGVADRGVPCVCPPERSSGPPLASESSIPSSAESVGXXXXXCGDAREKIVAVADDNAGVGDPAPAEDGAIFSTDDRRSPGATM---------AVAAXXXXXXXXXXXRAAGKGSRTDSIDGGGNGAATFRRAVTAACESYRAGVVLHQEAFLSSSTEKFLRALELLEIATAEI--RTGAVPQAYRGEPAKEVGGESTEVSCEDG-GGVGXXXXXXXSPSRGESFDGGGAEAVRSG--AEAVRSVRVGCHLNIAAAFLLRKTDFESAVDHCTRALVAQPGNSRALVRRAQAYQELGFFRLSVEDLEAAEASVSAEIRQLRPQGEETGGESAEPHAEELAEVVKRLDHARWTKVHVGNGRDELP 715
            MTDF+KWD+FDADAAE+E+ERKA         IAEEQ  LK CQDRAARLKSEAVV ALKAKRGSRRRS A TT  +GN+    S   LDG P++  A +AR SADEA AIL GLR GL LRDE+VA AEAG  HRG R ARECLV+L AAQ LL K  A   P D G  D+H  A  G +G++           XXXXXXXXXXXX            G  G  CA++ G    G   +   P      E    +E+  ALE+LRRAKAACRVAE ACL RGGR A+STE LR  LFE  +  V AWVARGESFLA++APLLAGLHFDRAL LD GC AAA HK++LR         SS+  +A  AA A  + +  P       ++   +      P++  S        GD  +  +AVA D  GV  PAPAEDGAIF+T+    P              VA     XXXXXX RAA +G   D    GG+     RR V AACE YRAGVVLHQE FLSSS ++FLR LE L+ ATA       AV +  +G  +      S +  C DG  G+        S S+  +    G E  + G     VR++RVGCHLNIAA+FLLRKTD ESA  HCTRALV +PGNSRALVRRAQA+QELG+FRL+VEDLEAAEASV A +R    +GE      +E  A ELAEVVKRL+HARWTKVHVGNG DELP
Sbjct:    1 MTDFEKWDRFDADAAEKEIERKAVVEEAKRVIIAEEQLVLKYCQDRAARLKSEAVVSALKAKRGSRRRS-ATTTEATGNTEDGVS---LDGAPKNVGALVARTSADEAHAILKGLRRGLELRDEIVADAEAGNFHRGTRTARECLVELSAAQKLLGKVVAVVSPGDTG--DNHGSATQGAAGATGGTCCGHGGHDXXXXXXXXXXXXSVDT--------GHVGQGCASDSGGGVRGKSAATGVPAQADGRENDEPEEIPKALEVLRRAKAACRVAEAACLLRGGRVAQSTEVLRELLFE-DSKSVAAWVARGESFLAMNAPLLAGLHFDRALELDKGCVAAATHKQNLRHV-------SSKGTSAASAACADESHQ-TPAAAGDTDAAPQKMTIHHGSPTNLSSRVGCGGNVGD--QGSLAVAGD-VGVETPAPAEDGAIFTTEATEDPAVAAETPDEEGNPGVAPTAAAXXXXXXDRAAARGVNDD----GGSVTEDVRRFVAAACEDYRAGVVLHQEGFLSSSRQRFLRVLEALDKATAAGLGMHAAVARQDKGGESAAGQSPSEKAGCGDGCEGLDGKSEEASSGSQVRATSKCGGERGKGGHAVTVVRNMRVGCHLNIAASFLLRKTDLESAAIHCTRALVVEPGNSRALVRRAQAHQELGYFRLAVEDLEAAEASVLASVRDGHRRGE-----GSEALAGELAEVVKRLEHARWTKVHVGNGNDELP 697
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7.15790.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LB22_ECTSI3.560e-15852.05Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 16..53
NoneNo IPR availablePANTHERPTHR45984FAMILY NOT NAMEDcoord: 601..660
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 577..683
e-value: 4.1E-15
score: 57.9
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 593..660

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7contigL-elsbetiae_contig7:64533..70916 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7.15790.1mRNA_L-elsbetiae_contig7.15790.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig7 63940..70977 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig7.15790.1 ID=prot_L-elsbetiae_contig7.15790.1|Name=mRNA_L-elsbetiae_contig7.15790.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=723bp
MTDFKKWDKFDADAAEEEVERKAGDEEAERRRIAEEQRALKSCQDRAARL
KSEAVVRALKAKRGSRRRSPAVTTAISGNSNSQDSSGPLDGKPRDDPASL
ARASADEAEAILTGLRAGLSLRDEVVAAAEAGELHRGVRKARECLVQLDA
AQALLLKTAAPTDCGGDDSHAQARAGGSGSSTGGSCGGGGGGGGFGSGHG
HSHAHAPHGHAHGRSGGRAGARCATEGGAAGAGTDESARAPGGRREEEES
ARKEMAGALEILRRAKAACRVAEGACLRRGGRAAESTETLRSFLFEARAG
CVPAWVARGESFLALDAPLLAGLHFDRALGLDSGCAAAAKHKESLRRFLA
LEGSPSSEPQAATVAAAAGVADRGVPCVCPPERSSGPPLASESSIPSSAE
SVGGGGGGCGDAREKIVAVADDNAGVGDPAPAEDGAIFSTDDRRSPGATM
AVAAVISSSPRGGGGRAAGKGSRTDSIDGGGNGAATFRRAVTAACESYRA
GVVLHQEAFLSSSTEKFLRALELLEIATAEIRTGAVPQAYRGEPAKEVGG
ESTEVSCEDGGGVGGGAGAGASPSRGESFDGGGAEAVRSGAEAVRSVRVG
CHLNIAAAFLLRKTDFESAVDHCTRALVAQPGNSRALVRRAQAYQELGFF
RLSVEDLEAAEASVSAEIRQLRPQGEETGGESAEPHAEELAEVVKRLDHA
RWTKVHVGNGRDELPGALKSSD*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf