mRNA_L-elsbetiae_contig7.15790.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig7.15790.1
Unique NamemRNA_L-elsbetiae_contig7.15790.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig7.15790.1 vs. uniprot
Match: D8LB22_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LB22_ECTSI)

HSP 1 Score: 484 bits (1245), Expect = 1.090e-155
Identity = 381/732 (52.05%), Postives = 445/732 (60.79%), Query Frame = 2 
Query:   62 MTDFKKWDKFDADAAEEEVERKAGDXXXXXRRIAEEQRALKSCQDRAARLKSEAVVRALKAKRGSRRRSPAVTTAISGNSNSQDSSGPLDGKPRDDPASLARASADEAEAILTGLRAGLSLRDEVVAAAEAGELHRGVRKARECLVQLDAAQALLLKTAA---PTDCGGDDSHAQARAGGSGSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSGGRAGARCATEGGAAGAGTDESARAPGGRREEEESARKEMAGALEILRRAKAACRVAEGACLRRGGRAAESTETLRSFLFEARAGCVPAWVARGESFLALDAPLLAGLHFDRALGLDSGCAAAAKHKESLRRFLALEGSPSSEPQAATVAAAAGVADRGVPCVCPPERSSGPPLASESSIPSSAESVGXXXXXCGDAREKIVAVADDNAGVGDPAPAEDGAIFSTDDRRSPGATM---------AVAAXXXXXXXXXXXRAAGKGSRTDSIDGGGNGAATFRRAVTAACESYRAGVVLHQEAFLSSSTEKFLRALELLEIATAEI--RTGAVPQAYRGEPAKEVGGESTEVSCEDG-GGVGXXXXXXXSPSRGESFDGGGAEAVRSG--AEAVRSVRVGCHLNIAAAFLLRKTDFESAVDHCTRALVAQPGNSRALVRRAQAYQELGFFRLSVEDLEAAEASVSAEIRQLRPQGEETGGESAEPHAEELAEVVKRLDHARWTKVHVGNGRDELP 2206
            MTDF+KWD+FDADAAE+E+ERKA         IAEEQ  LK CQDRAARLKSEAVV ALKAKRGSRRRS A TT  +GN+    S   LDG P++  A +AR SADEA AIL GLR GL LRDE+VA AEAG  HRG R ARECLV+L AAQ LL K  A   P D G  D+H  A  G +G++           XXXXXXXXXXXX            G  G  CA++ G    G   +   P      E    +E+  ALE+LRRAKAACRVAE ACL RGGR A+STE LR  LFE  +  V AWVARGESFLA++APLLAGLHFDRAL LD GC AAA HK++LR         SS+  +A  AA A  + +  P       ++   +      P++  S        GD  +  +AVA D  GV  PAPAEDGAIF+T+    P              VA     XXXXXX RAA +G   D    GG+     RR V AACE YRAGVVLHQE FLSSS ++FLR LE L+ ATA       AV +  +G  +      S +  C DG  G+        S S+  +    G E  + G     VR++RVGCHLNIAA+FLLRKTD ESA  HCTRALV +PGNSRALVRRAQA+QELG+FRL+VEDLEAAEASV A +R    +GE      +E  A ELAEVVKRL+HARWTKVHVGNG DELP
Sbjct:    1 MTDFEKWDRFDADAAEKEIERKAVVEEAKRVIIAEEQLVLKYCQDRAARLKSEAVVSALKAKRGSRRRS-ATTTEATGNTEDGVS---LDGAPKNVGALVARTSADEAHAILKGLRRGLELRDEIVADAEAGNFHRGTRTARECLVELSAAQKLLGKVVAVVSPGDTG--DNHGSATQGAAGATGGTCCGHGGHDXXXXXXXXXXXXSVDT--------GHVGQGCASDSGGGVRGKSAATGVPAQADGRENDEPEEIPKALEVLRRAKAACRVAEAACLLRGGRVAQSTEVLRELLFE-DSKSVAAWVARGESFLAMNAPLLAGLHFDRALELDKGCVAAATHKQNLRHV-------SSKGTSAASAACADESHQ-TPAAAGDTDAAPQKMTIHHGSPTNLSSRVGCGGNVGD--QGSLAVAGD-VGVETPAPAEDGAIFTTEATEDPAVAAETPDEEGNPGVAPTAAAXXXXXXDRAAARGVNDD----GGSVTEDVRRFVAAACEDYRAGVVLHQEGFLSSSRQRFLRVLEALDKATAAGLGMHAAVARQDKGGESAAGQSPSEKAGCGDGCEGLDGKSEEASSGSQVRATSKCGGERGKGGHAVTVVRNMRVGCHLNIAASFLLRKTDLESAAIHCTRALVVEPGNSRALVRRAQAHQELGYFRLAVEDLEAAEASVLASVRDGHRRGE-----GSEALAGELAEVVKRLEHARWTKVHVGNGNDELP 697
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7.15790.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LB22_ECTSI1.090e-15552.05Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7contigL-elsbetiae_contig7:63940..70977 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons7
Model size2823
Cds size2169
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816776.6446822-UTR-L-elsbetiae_contig7:63939..645321622816776.6446822-UTR-L-elsbetiae_contig7:63939..64532Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig7 63940..64532 -
1691683804.7989452-UTR-L-elsbetiae_contig7:63939..645321691683804.7989452-UTR-L-elsbetiae_contig7:63939..64532Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig7 63940..64532 -
1622816776.741279-UTR-L-elsbetiae_contig7:70916..709771622816776.741279-UTR-L-elsbetiae_contig7:70916..70977Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig7 70917..70977 -
1691683804.899648-UTR-L-elsbetiae_contig7:70916..709771691683804.899648-UTR-L-elsbetiae_contig7:70916..70977Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig7 70917..70977 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816776.6611915-CDS-L-elsbetiae_contig7:64532..645891622816776.6611915-CDS-L-elsbetiae_contig7:64532..64589Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7 64533..64589 -
1691683804.810157-CDS-L-elsbetiae_contig7:64532..645891691683804.810157-CDS-L-elsbetiae_contig7:64532..64589Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7 64533..64589 -
1622816776.6734407-CDS-L-elsbetiae_contig7:64885..651231622816776.6734407-CDS-L-elsbetiae_contig7:64885..65123Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7 64886..65123 -
1691683804.8199666-CDS-L-elsbetiae_contig7:64885..651231691683804.8199666-CDS-L-elsbetiae_contig7:64885..65123Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7 64886..65123 -
1622816776.6868637-CDS-L-elsbetiae_contig7:65927..668991622816776.6868637-CDS-L-elsbetiae_contig7:65927..66899Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7 65928..66899 -
1691683804.8307652-CDS-L-elsbetiae_contig7:65927..668991691683804.8307652-CDS-L-elsbetiae_contig7:65927..66899Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7 65928..66899 -
1622816776.698886-CDS-L-elsbetiae_contig7:67177..676701622816776.698886-CDS-L-elsbetiae_contig7:67177..67670Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7 67178..67670 -
1691683804.841105-CDS-L-elsbetiae_contig7:67177..676701691683804.841105-CDS-L-elsbetiae_contig7:67177..67670Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7 67178..67670 -
1622816776.7110674-CDS-L-elsbetiae_contig7:68637..688871622816776.7110674-CDS-L-elsbetiae_contig7:68637..68887Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7 68638..68887 -
1691683804.854497-CDS-L-elsbetiae_contig7:68637..688871691683804.854497-CDS-L-elsbetiae_contig7:68637..68887Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7 68638..68887 -
1622816776.7212348-CDS-L-elsbetiae_contig7:69947..700401622816776.7212348-CDS-L-elsbetiae_contig7:69947..70040Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7 69948..70040 -
1691683804.875813-CDS-L-elsbetiae_contig7:69947..700401691683804.875813-CDS-L-elsbetiae_contig7:69947..70040Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7 69948..70040 -
1622816776.7311678-CDS-L-elsbetiae_contig7:70850..709161622816776.7311678-CDS-L-elsbetiae_contig7:70850..70916Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7 70851..70916 -
1691683804.8896499-CDS-L-elsbetiae_contig7:70850..709161691683804.8896499-CDS-L-elsbetiae_contig7:70850..70916Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7 70851..70916 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7.15790.1prot_L-elsbetiae_contig7.15790.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig7 64533..70916 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig7.15790.1

>prot_L-elsbetiae_contig7.15790.1 ID=prot_L-elsbetiae_contig7.15790.1|Name=mRNA_L-elsbetiae_contig7.15790.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=723bp
MTDFKKWDKFDADAAEEEVERKAGDEEAERRRIAEEQRALKSCQDRAARL
KSEAVVRALKAKRGSRRRSPAVTTAISGNSNSQDSSGPLDGKPRDDPASL
ARASADEAEAILTGLRAGLSLRDEVVAAAEAGELHRGVRKARECLVQLDA
AQALLLKTAAPTDCGGDDSHAQARAGGSGSSTGGSCGGGGGGGGFGSGHG
HSHAHAPHGHAHGRSGGRAGARCATEGGAAGAGTDESARAPGGRREEEES
ARKEMAGALEILRRAKAACRVAEGACLRRGGRAAESTETLRSFLFEARAG
CVPAWVARGESFLALDAPLLAGLHFDRALGLDSGCAAAAKHKESLRRFLA
LEGSPSSEPQAATVAAAAGVADRGVPCVCPPERSSGPPLASESSIPSSAE
SVGGGGGGCGDAREKIVAVADDNAGVGDPAPAEDGAIFSTDDRRSPGATM
AVAAVISSSPRGGGGRAAGKGSRTDSIDGGGNGAATFRRAVTAACESYRA
GVVLHQEAFLSSSTEKFLRALELLEIATAEIRTGAVPQAYRGEPAKEVGG
ESTEVSCEDGGGVGGGAGAGASPSRGESFDGGGAEAVRSGAEAVRSVRVG
CHLNIAAAFLLRKTDFESAVDHCTRALVAQPGNSRALVRRAQAYQELGFF
RLSVEDLEAAEASVSAEIRQLRPQGEETGGESAEPHAEELAEVVKRLDHA
RWTKVHVGNGRDELPGALKSSD*
back to top

mRNA from alignment at L-elsbetiae_contig7:63940..70977-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig7.15790.1 ID=mRNA_L-elsbetiae_contig7.15790.1|Name=mRNA_L-elsbetiae_contig7.15790.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=7038bp|location=Sequence derived from alignment at L-elsbetiae_contig7:63940..70977- (Laminarionema elsbetiae ELsaHSoW15)
GTGGAGAGGGCAGAGCTGGAGCGCCACATTGCACTACCCAGCTGGTCGGG
CTGGTTCTATTATGACAGACTTCAAGAAATGGGACAAGTTCGACGCAGAT
GCTGCCGAGGAGGAAGTGGAACGCAAGGTGAGCAGAGTTGAGTAATTGCG
CCGCCTGTGAGATGAAAAGTGTGGGTGGGTCACGGCCGGTGACCCCCTCC
GGCTTCAGCTAGCCGCGACAACAGGCATGGTGGTCAACATATCTAGAGAG
CACCAATACGTTTGTTGAATGCTACGAATTCGTGAGATGCAAGTAGTGGT
GCCTGTGAGGAGCACTCAGGTGGTCTGTGCTCCTCAAGATCCACTTGGAG
CACCAGCGATCTTCACCCCTTCCCAGAACACCACGCCGATGCCAACTACA
TGTATACACGCAACAGCGGAACACAGCAGTATGACCAGACGAATAGTCTA
CTAGTTTGCCGACCCAACTCAAAAGTACGCTATTGTGGCGAACAAGGGCA
TGGTACCTGTTGGGGTATTTGTAGTAGGTACAAGAACGACTCTATTCTAC
TGTGTGAGTTTGATACAGTATTGTAAAGGCGTGTTCCAAGTCTGTAACCG
CCAGGTGAAGACAGCTTGGGCGTCTATGTGTGGATAATAAATCACTCTGT
GTTTCTCTACCCAAGCCTCAGCCACATACGCCAGCTACAGCGTACAGCAG
CCACTGTACTGCTCAACAGTACCGCCTCTCGGATCACACACACACACACA
CACACACACACACACACACACACACAACAAACACACGCACAGCAGTAGAG
GTATGGTACATGGCCTCTCTAGGTATGTAAGAGTACAAAGAAGTACGTAT
GTTATGTGTATTGCAGAAATACAAGTTAGGCAAAAGGAGTATTATTTACC
CATACCAACACCGCGTCTCCTTGGCGGCTACTCGCAGGCGGGGGATGAGG
AGGCGGAGCGTAGAAGGATTGCGGAAGAGCAACGGGCTCTGAAGAGCTGC
CAAGACAGGGCTGCCAGGCTGAAATCAGAAGTAAGGACCCCGGCAATGTG
GCATGTTTATACATACGCATACAAGGGCGCTTCGTGACGGGCCAAGCGGG
CCGCCGCTACGCTCGTAGGCTGCAAGACGATGCCAAGTGTTTATTTTTTC
GTATATCTAGACTATATCATCAGCTGATTTATTTATGTACTTCTACACAG
ATAGATATGTACATTCGTAGATATTGCGGTAAGTCTTACTGCCCGAGACT
GTAAAAAATGAGCCGGCGCCGCTGCAACGCATACCTATGTACGTGTGTAG
CGGATGCGCTTGCTGCGATCTTCCACACCCGCCCACGCGAAAAGAGGATC
GGAAAAGCTAGTTGGTTAACTGCGATTGTTGCGGTACTTCGTGTGCGCCC
CATGAGCGATGCCTGACTGCCGCCGAGGCGGGGTCGGCCTGCGGCATGTT
ATCTCCTATCAGACCTCGGGTCCCGTGGGGTTATAAAGCGTGTTACCAAC
TGTCACATACATGTGTACAGCGGTCCGTGACTGCTCATCCTGAAGAGATT
GATCGGTACCGAAGGGAGTGGTGGTTCTTAAGAAACTCAAGAGACCGCCG
AGATGCCGTACATAGATCTTTGAGACGGCTCTCTTGTCATGCTACACGCG
ACGCCCGTCCCGAGAGCGAGTAGCGCGCGGGAAACGTCTTCGCAGCTCAG
GGCTACGGATAGGCGCAAAGCTCGCCGCAAGACGAAGTCTTAAGAGCGGA
GAAACTTGAAAAAATGGCGTCTAGGCTAAGGCCAAGGAGAGAGCTCACAA
GGCCTTTCTGTATTTTTCCGAACTCCAGGTCGAGATGTGTGTGCATGTAT
GTAGCTGCTCCCTTGCTCGAAATTCTGGCGACTCGCAAAAGTCGAACGGG
GGTTCAGTACTGGACAAACGGAGCGGGAGAACGCTGAGTTTGCTCGCGAA
CGGCATGCTGCTGTAGAACGTGCACGTGGCACCAATACATCGGGCTTGAA
CCTCGCCATCCGAACCGTGCCCACTCTTCATCTGCCGGCTCTGCTACCCT
GACACACACACACGCACGCACGCACGCACGCACACTCCAGGCGGTGGTAC
GCGCACTCAAGGCCAAGCGAGGCTCGCGAAGGCGATCGCCTGCGGTCACG
ACCGCGATCTCTGGCAACAGCAACAGCCAAGACAGCAGTGGCCCCTTGGA
TGGAAAGCCCAGGGACGACCCCGCTTCCCTCGCGAGGGCAAGCGCCGACG
AGGCGGAGGCGATCTTGACTGGATTGCGCGCGGGACTGTCGCTCAGGGAC
GAGGTGGTCGCAGCCGCCGAGGCTGGGGAGCTGCATCGAGGTAGAACAGG
GGGCAGCAACATTTCTACTGCGGGCATATGCACAAGTACGTAGCTGCGAG
CATTACGAGTTTGATATGGAGCGGGGAGGGGGGGGGCGCCCTCGTCTTCA
ACGTATTGTGCCCCCCCTTGTGACCTCTCGTGACCACCACCTGCCAGGGG
GGCGTTTTTCCTCTTCGATGTGTTGTAAACTCTCCGTCAAGTGGCACTTC
CTATTCGCCCCATGCTCTCCTCTGGAAGGCCTATTTTTTTCTCCCCAGAT
ACTACTCGCATTGTCCCAGTATCACGGGGGGGGGGGGGGGGGGGGCGTAA
CGTGCGGGGGAACTTCCGTGTGCATTGCGTCCGATCTGTTCTTCATCATC
CGCAGAAAGCGACCCCAAGCGCACAGATCATGCCCCGAGGGCGCCAAACA
GGAGCAGCCTGTAGAGTGTAGCAGCCTCACCACGAAAAACTATTATACTG
CTGTACGATAGCAGCCTGTTTTTTTTTTCTGTGGCATTCTCTGGGGTGTG
CTACGCACGGGGGGGGGGGGGGTCGGATGCATCTCCCCACCCCCTCGGGG
AGGGGGCACAGAAAAAAAAAAAAATCTGGAAAAANNNNNNNCATCATCGA
GGCCGGCGCCCTGCGTGCGTGTTTGCCGCCCGGGCGAATCTCGTGGGGGC
GGCGACGCCGGGGGGGGGGGGGGTCGTATGCATCTCCTCAACCCGTCGGT
GAGGTGGCACAGAAAAAAAACAAAATCTGGAAAGACTCGGGCTGCAACAT
CTAAAGGGCACACAAACGGCGCGGTCGTTTTCGCGGAGGAATATGTGCGT
GTCCCATCACTCATAGCGGGCGTCACAATCTCCGGCCTCAATGCAACAGC
ACCAACCAAGCACCCGCCGCCCGCCCGCAAACCACGTTCTTCACCCGCGC
CCCGCTTGCTTACTGCCGTTCCCGTTTGTCGTGTTTCCCCCCCAATAATC
ACGACAGGGGTGCGCAAGGCGCGTGAGTGTCTGGTGCAGCTCGACGCCGC
ACAGGCCCTTCTCCTCAAGACCGCGGCACCGACAGACTGTGGCGGTGACG
ACAGCCACGCGCAGGCACGGGCGGGAGGAAGCGGCAGCAGCACCGGTGGC
AGCTGCGGCGGCGGCGGCGGGGGCGGCGGCTTCGGCAGCGGACACGGCCA
CTCGCACGCACACGCACCCCACGGGCATGCACACGGCAGGAGTGGTGGAC
GTGCGGGGGCTCGGTGTGCCACCGAGGGAGGGGCTGCAGGGGCTGGCACT
GACGAGTCCGCTAGGGCACCGGGAGGGCGAAGGGAAGAGGAGGAGAGTGC
AAGGAAGGAGATGGCCGGGGCCTTAGAGATTCTGCGGCGAGCCAAGGCCG
CGTGCAGGGTCGCGGAGGGGGCGTGCCTGCGGCGAGGGGGGCGGGCGGCC
GAGTCAACCGAAACGCTGCGGAGTTTCCTTTTCGAGGCACGGGCCGGTTG
GTTGTACGTACATACATGCATACGAGAGGGTCTAACAAGGCGGCTCAGTG
ACCATTGAGAGAGCGCATCAAGCCCAAAGCTAGAACCCGACCACTGGTAC
GCCGACAAGGAGCGCCTTGGTACTGGAGCGCATCAGAAGTGGCGACCCCG
GAGAACGAGCTAGCTCGCTTCGGGCTGTGCAGCGGCGACGCCGGCAACCC
CACCAAATCATCGCACCCAGCTCCTGTAACCCCCCACTCCCCTTGCCCCC
CCCCTTTCCCCCCACAGGACCCCAAAAGCGTACCAGCCTGGGTGGCTCGC
GGAGAGTCGTTCCTCGCCTTGGACGCGCCGTTGCTCGCGGGGCTGCACTT
CGATAGGGCCCTCGGGCTTGATAGCGGCTGCGCGGCGGCCGCGAAGCACA
AGGAAAGCCTGCGCCGCTTTCTGGCACTGGAGGGTTCTCCTTCTTCCGAA
CCGCAAGCAGCAACAGTCGCTGCCGCCGCCGGGGTGGCAGATCGCGGTGT
GCCGTGCGTATGCCCCCCTGAGCGTTCGTCCGGGCCCCCCCTTGCCTCCG
AGAGCTCTATCCCCTCCAGTGCGGAAAGTGTCGGAGGTGGTGGTGGTGGT
TGTGGTGACGCCCGAGAAAAGATCGTGGCGGTTGCCGATGACAACGCCGG
CGTTGGGGACCCAGCGCCGGCGGAGGACGGGGCGATTTTCAGCACCGACG
ATAGACGAAGTCCGGGAGCGACCATGGCGGTGGCGGCGGTCATTTCCTCC
TCGCCGCGGGGGGGAGGAGGAAGAGCGGCGGGAAAGGGCAGCAGGACCGA
CAGCATCGACGGCGGCGGAAACGGCGCGGCGACTTTTCGACGTGCCGTGA
CCGCGGCCTGCGAGAGCTACCGCGCGGGCGTGGTTCTCCACCAAGAGGCC
TTCTTGTCCTCTTCCACGGAGAAGTTCCTCCGAGCTCTGGAGCTGCTAGA
GATCGCCACGGCGGAGATAAGAACGGGTGCGGTCCCGCAGGCTTACAGGG
GAGAGCCAGCCAAGGAGGTGGGAGGAGAAAGTACTGAGGTTTCTTGCGAG
GATGGCGGCGGAGTGGGCGGCGGGGCGGGGGCCGGGGCGTCGCCGTCGCG
GGGCGAAAGCTTTGACGGAGGCGGCGCAGAGGCAGTACGGAGCGGCGCAG
AGGCAGTACGGAGCGTGCGCGTGGGGTGCCATCTCAACATCGCGGCTGCG
TTTTTGCTCCGGAAGACTGACTTCGAGTCGGCGGTGGATCACTGCACGAG
GTAGGCACGTATGTGCCTGGAGAGGGGCGCGACGGGTCGTTGTCTCTCCA
ACTCATATTTGCCCCGTTAGGGCACGAGGTGTGATGCCGGCCGACAAAAG
ACAAGCATCACAACCTTATGCATTAAGAACGGCACCAGATTCGGAAGAAC
ACCTCCACACGCTCAACCAGGTTGAATGTGGGCTATGTAGCGCCCCCGCT
ACCCCCCCCCCCCCCACGCTCCCGAAAAAGACTCGCCGTCCTGATGCCAC
GCACGGTTTCGGGTTAGCGTCGAGTTGGCAATGATCCTCTACCTGTACAC
CACCTCTCTGCGCAAGCTAGAGAGGTCACCAGTTGCCGCTTCTGTGTCTG
TCCGCATTTTTGCTTCTCTTTTCCCGGGACAAATTCATTGAACGTGGGCG
CGTTTAAGACCATGTTTGTTGTGCGGGGTGGAGGGCCTTAAAACTCTGCA
CACAGGCGGGGTAGACTAATCATATAACGCACTTCTGTTGAGTTCTTGAG
GCGCGCACAAAGGCGGTGTATTGTAGTAGCTCGTTGCTGTCTCTGGAAGC
GGCGACACCTGGCAATGGGGCGGCTAGTTCGAGGCTGTCGATCCATTGTT
CGAGTCGATCTCCAGCAACAAACAACACGAAGAGAATCAAGGCGCTTCGC
ACTTCGGTGAACGCGAACCTGGTCCGGGGACGGGCCGGCGCTCGTCCCGG
CGTTGTAAAGATGCGAGGCATGCTTAATGATTTGACGGCGGCGGCACGCA
CGATCAATGACACCCTCCCCCCGCCCCCCGAAACGTCGCCATCCGACCAA
TCAGAGCTCTCGTCGCCCAACCCGGCAACAGCCGAGCGCTGGTGCGTCGC
GCTCAAGCGTACCAAGAGCTGGGCTTCTTCCGCCTCTCCGTGGAAGATCT
TGAGGCTGCAGAGGCCTCGGTTTCGGCAGAGATTCGACAACTTCGTCCCC
AAGGAGAGGAGACTGGAGGAGAAAGCGCGGAGCCTCATGCGGAGGAGCTG
GCGGAGGTTGTGAAACGGCTGGACCACGCGCGGTGGACAAAGGTGAGGGC
GGTTGGCGGTTTCATTCCAGGGGGTTCGGGTTCAAACGAACCGACTGAAT
TAAGTTCACCAGAGAGAGGGTACGTTTTTCGTGTGGCTTTCACGGAGCTA
CGTCGTGGGGTGAACCTTTCTGTTTTACTGCGTGTGGTGGAGCGTCAATG
TTTTGGGTGTTGTCCATGGTTGAGATTTCGGGGAGGCTGTGGTACAGACA
CTAGTACATACCGTAGCTGCTGACCCTTACAGGTTGGTGTATTCGTGTGC
TCTTCTGACAACACACTTCTCGCATCTTGATCTTGCAGGTGCACGTCGGT
AACGGCAGGGACGAACTGCCGGGAGCGTTAAAGTCTTCAGATTAGGGACG
GACGGATCGCGATATTGACCGACAAGGATAGTTCAATTATGAAGGCGTTA
TTAGATACGCACTTAGTCGGCGCTGATGTGACTGGGTATCTCAGCCGTTT
GTGGCAGCTCCGCAGACAAGGAAAAAGCTGGGGGGTCGTCTTCATGCAAA
GTCGGCGTCTAAACACCTCTGAATAGGGGGTCTTATTGTAGCATGTCTAG
GAGTTCATCGTAGCACGTCTGGGATTCATCTGAACGTCTTGTTGTGCTTC
CAACCCCCCCACATATTGTTGTCCACAAAGATGCCGAGTTTCATGACAAG
CGTGGCATCATGCGTCTTGGAACTCACAGTCTGAGACAACTGCAAGAAGA
CGTGCTGAGCTGCCATAGACAAGGAGTTGGACAGATCGCTCCGTGTGAAA
CGGATTGCAGTAAGACGAATCCAAGACGTGACGGCCTGATTTAGCGGCCA
GATTGGCAAAAAAAAATCTTCTTGTATGTATGTATGTAATCCCTTCCCCA
CCATGCAACGGGGTTCCGAGGAGAAGACAAAAAAACGCCGTGTCTGAGGA
TCTCTCACGGTATAAGACAACTGCAGTAAGACGTGTGC
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig7:63940..70977-

>mRNA_L-elsbetiae_contig7.15790.1 ID=mRNA_L-elsbetiae_contig7.15790.1|Name=mRNA_L-elsbetiae_contig7.15790.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=4338bp|location=Sequence derived from alignment at L-elsbetiae_contig7:63940..70977- (Laminarionema elsbetiae ELsaHSoW15)
ATGACAGACTTCAAGAAATGGGACAAGTTCGACGCAGATGCTGCCGAGGA
GGAAGTGGAACGCAAGATGACAGACTTCAAGAAATGGGACAAGTTCGACG
CAGATGCTGCCGAGGAGGAAGTGGAACGCAAGGCGGGGGATGAGGAGGCG
GAGCGTAGAAGGATTGCGGAAGAGCAACGGGCTCTGAAGAGCTGCCAAGA
CAGGGCTGCCAGGCTGAAATCAGAAGCGGGGGATGAGGAGGCGGAGCGTA
GAAGGATTGCGGAAGAGCAACGGGCTCTGAAGAGCTGCCAAGACAGGGCT
GCCAGGCTGAAATCAGAAGCGGTGGTACGCGCACTCAAGGCCAAGCGAGG
CTCGCGAAGGCGATCGCCTGCGGTCACGACCGCGATCTCTGGCAACAGCA
ACAGCCAAGACAGCAGTGGCCCCTTGGATGGAAAGCCCAGGGACGACCCC
GCTTCCCTCGCGAGGGCAAGCGCCGACGAGGCGGAGGCGATCTTGACTGG
ATTGCGCGCGGGACTGTCGCTCAGGGACGAGGTGGTCGCAGCCGCCGAGG
CTGGGGAGCTGCATCGAGGCGGTGGTACGCGCACTCAAGGCCAAGCGAGG
CTCGCGAAGGCGATCGCCTGCGGTCACGACCGCGATCTCTGGCAACAGCA
ACAGCCAAGACAGCAGTGGCCCCTTGGATGGAAAGCCCAGGGACGACCCC
GCTTCCCTCGCGAGGGCAAGCGCCGACGAGGCGGAGGCGATCTTGACTGG
ATTGCGCGCGGGACTGTCGCTCAGGGACGAGGTGGTCGCAGCCGCCGAGG
CTGGGGAGCTGCATCGAGGGGTGCGCAAGGCGCGTGAGTGTCTGGTGCAG
CTCGACGCCGCACAGGCCCTTCTCCTCAAGACCGCGGCACCGACAGACTG
TGGCGGTGACGACAGCCACGCGCAGGCACGGGCGGGAGGAAGCGGCAGCA
GCACCGGTGGCAGCTGCGGCGGCGGCGGCGGGGGCGGCGGCTTCGGCAGC
GGACACGGCCACTCGCACGCACACGCACCCCACGGGCATGCACACGGCAG
GAGTGGTGGACGTGCGGGGGCTCGGTGTGCCACCGAGGGAGGGGCTGCAG
GGGCTGGCACTGACGAGTCCGCTAGGGCACCGGGAGGGCGAAGGGAAGAG
GAGGAGAGTGCAAGGAAGGAGATGGCCGGGGCCTTAGAGATTCTGCGGCG
AGCCAAGGCCGCGTGCAGGGTCGCGGAGGGGGCGTGCCTGCGGCGAGGGG
GGCGGGCGGCCGAGTCAACCGAAACGCTGCGGAGTTTCCTTTTCGAGGCA
CGGGCCGGTTGGGGTGCGCAAGGCGCGTGAGTGTCTGGTGCAGCTCGACG
CCGCACAGGCCCTTCTCCTCAAGACCGCGGCACCGACAGACTGTGGCGGT
GACGACAGCCACGCGCAGGCACGGGCGGGAGGAAGCGGCAGCAGCACCGG
TGGCAGCTGCGGCGGCGGCGGCGGGGGCGGCGGCTTCGGCAGCGGACACG
GCCACTCGCACGCACACGCACCCCACGGGCATGCACACGGCAGGAGTGGT
GGACGTGCGGGGGCTCGGTGTGCCACCGAGGGAGGGGCTGCAGGGGCTGG
CACTGACGAGTCCGCTAGGGCACCGGGAGGGCGAAGGGAAGAGGAGGAGA
GTGCAAGGAAGGAGATGGCCGGGGCCTTAGAGATTCTGCGGCGAGCCAAG
GCCGCGTGCAGGGTCGCGGAGGGGGCGTGCCTGCGGCGAGGGGGGCGGGC
GGCCGAGTCAACCGAAACGCTGCGGAGTTTCCTTTTCGAGGCACGGGCCG
GTTGCGTACCAGCCTGGGTGGCTCGCGGAGAGTCGTTCCTCGCCTTGGAC
GCGCCGTTGCTCGCGGGGCTGCACTTCGATAGGGCCCTCGGGCTTGATAG
CGGCTGCGCGGCGGCCGCGAAGCACAAGGAAAGCCTGCGCCGCTTTCTGG
CACTGGAGGGTTCTCCTTCTTCCGAACCGCAAGCAGCAACAGTCGCTGCC
GCCGCCGGGGTGGCAGATCGCGGTGTGCCGTGCGTATGCCCCCCTGAGCG
TTCGTCCGGGCCCCCCCTTGCCTCCGAGAGCTCTATCCCCTCCAGTGCGG
AAAGTGTCGGAGGTGGTGGTGGTGGTTGTGGTGACGCCCGAGAAAAGATC
GTGGCGGTTGCCGATGACAACGCCGGCGTTGGGGACCCAGCGCCGGCGGA
GGACGGGGCGATTTTCAGCACCGACGATAGACGAAGTCCGGGAGCGACCA
TGGCGGTGGCGGCGGTCATTTCCTCCTCGCCGCGGGGGGGAGGAGGAAGA
GCGGCGGGAAAGGGCAGCAGGACCGACAGCATCGACGGCGGCGGAAACGG
CGCGGCGACTTTTCGACGTGCCGTGACCGCGGCCTGCGAGAGCTACCGCG
CGGGCGTGGTTCTCCACCAAGAGGCCTTCTTGTCCTCTTCCACGGAGAAG
TTCCTCCGAGCTCTGGAGCTGCTAGAGATCGCCACGGCGGAGATAAGAAC
GGGTGCGGTCCCGCAGGCTTACAGGGGAGAGCCAGCCAAGGAGGTGGGAG
GAGAAAGTACTGAGGTTTCTTGCGAGGATGGCGGCGGAGTGGGCGGCGGG
GCGGGGGCCGGGGCGTCGCCGTCGCGGGGCGAAAGCTTTGACGGAGGCGG
CGCAGAGGCAGTACGGAGCGGCGCAGAGGCAGTACGGAGCGTGCGCGTGG
GGTGCCATCTCAACATCGCGGCTGCGTTTTTGCTCCGGAAGACTGACTTC
GAGTCGGCGGTGGATCACTGCACGAGCGTACCAGCCTGGGTGGCTCGCGG
AGAGTCGTTCCTCGCCTTGGACGCGCCGTTGCTCGCGGGGCTGCACTTCG
ATAGGGCCCTCGGGCTTGATAGCGGCTGCGCGGCGGCCGCGAAGCACAAG
GAAAGCCTGCGCCGCTTTCTGGCACTGGAGGGTTCTCCTTCTTCCGAACC
GCAAGCAGCAACAGTCGCTGCCGCCGCCGGGGTGGCAGATCGCGGTGTGC
CGTGCGTATGCCCCCCTGAGCGTTCGTCCGGGCCCCCCCTTGCCTCCGAG
AGCTCTATCCCCTCCAGTGCGGAAAGTGTCGGAGGTGGTGGTGGTGGTTG
TGGTGACGCCCGAGAAAAGATCGTGGCGGTTGCCGATGACAACGCCGGCG
TTGGGGACCCAGCGCCGGCGGAGGACGGGGCGATTTTCAGCACCGACGAT
AGACGAAGTCCGGGAGCGACCATGGCGGTGGCGGCGGTCATTTCCTCCTC
GCCGCGGGGGGGAGGAGGAAGAGCGGCGGGAAAGGGCAGCAGGACCGACA
GCATCGACGGCGGCGGAAACGGCGCGGCGACTTTTCGACGTGCCGTGACC
GCGGCCTGCGAGAGCTACCGCGCGGGCGTGGTTCTCCACCAAGAGGCCTT
CTTGTCCTCTTCCACGGAGAAGTTCCTCCGAGCTCTGGAGCTGCTAGAGA
TCGCCACGGCGGAGATAAGAACGGGTGCGGTCCCGCAGGCTTACAGGGGA
GAGCCAGCCAAGGAGGTGGGAGGAGAAAGTACTGAGGTTTCTTGCGAGGA
TGGCGGCGGAGTGGGCGGCGGGGCGGGGGCCGGGGCGTCGCCGTCGCGGG
GCGAAAGCTTTGACGGAGGCGGCGCAGAGGCAGTACGGAGCGGCGCAGAG
GCAGTACGGAGCGTGCGCGTGGGGTGCCATCTCAACATCGCGGCTGCGTT
TTTGCTCCGGAAGACTGACTTCGAGTCGGCGGTGGATCACTGCACGAGAG
CTCTCGTCGCCCAACCCGGCAACAGCCGAGCGCTGGTGCGTCGCGCTCAA
GCGTACCAAGAGCTGGGCTTCTTCCGCCTCTCCGTGGAAGATCTTGAGGC
TGCAGAGGCCTCGGTTTCGGCAGAGATTCGACAACTTCGTCCCCAAGGAG
AGGAGACTGGAGGAGAAAGCGCGGAGCCTCATGCGGAGGAGCTGGCGGAG
GTTGTGAAACGGCTGGACCACGCGCGGTGGACAAAGAGCTCTCGTCGCCC
AACCCGGCAACAGCCGAGCGCTGGTGCGTCGCGCTCAAGCGTACCAAGAG
CTGGGCTTCTTCCGCCTCTCCGTGGAAGATCTTGAGGCTGCAGAGGCCTC
GGTTTCGGCAGAGATTCGACAACTTCGTCCCCAAGGAGAGGAGACTGGAG
GAGAAAGCGCGGAGCCTCATGCGGAGGAGCTGGCGGAGGTTGTGAAACGG
CTGGACCACGCGCGGTGGACAAAGGTGCACGTCGGTAACGGCAGGGACGA
ACTGCCGGGAGCGTTAAAGTCTTCAGATTAGGTGCACGTCGGTAACGGCA
GGGACGAACTGCCGGGAGCGTTAAAGTCTTCAGATTAG
back to top