prot_L-elsbetiae_contig6992.15775.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig6992.15775.1
Unique Nameprot_L-elsbetiae_contig6992.15775.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length225
Homology
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BLAST of mRNA_L-elsbetiae_contig6992.15775.1 vs. uniprot
Match: A0A6H5JRH5_9PHAE (Hydrolase_4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRH5_9PHAE)

HSP 1 Score: 189 bits (479), Expect = 1.690e-51
Identity = 132/232 (56.90%), Postives = 152/232 (65.52%), Query Frame = 0 
Query:   23 VKWKSVRRSLPGLIVGEDALSSDEFGGRDCLSLGNSPQPLDELEGDXXXXXXXXXXXXXXXXXXXXXXXGAQ-----------------------------EPSFRPPGLVRHESLPSLHLNARCLKCDAVGTIYCKGCEAHFCARHDQRRHRFLLRKNRHEHHAVPGISYFRIPRPDDDSSSPPLSEEDGGSENLEWVGSPGSAESPSAANVPPSFVGALRRDEVRLDISG 225
            ++ K+VRRSLPG+IV ED + +D++ GR+C+SL NSPQPLDE EG+    XXXXXXXXXXXXXXXXXXX                                E +F  PGLVRHESLPSLHLNARC+KCDA+G IYCKGCEAHFCARHDQRRHRFLLRKNRHEH AVP ISYFRIP P+D   SPPLS E  GS+N   +  P       A        G LR+ +V +D SG
Sbjct:    1 MRRKNVRRSLPGVIV-EDGMLADDYIGRECMSLDNSPQPLDEREGEPEQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAGGRGRRDLEEAFMAPGLVRHESLPSLHLNARCIKCDAMGIIYCKGCEAHFCARHDQRRHRFLLRKNRHEHQAVPDISYFRIPLPNDGMLSPPLSSE--GSDNQSPIPPPVGRRGVRAG-------GGLRQRDVEVDTSG 222
[Close]
BLAST of mRNA_L-elsbetiae_contig6992.15775.1 vs. uniprot
Match: D8LMU3_ECTSI (Hydrolase_4 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMU3_ECTSI)

HSP 1 Score: 170 bits (431), Expect = 4.660e-45
Identity = 99/173 (57.23%), Postives = 113/173 (65.32%), Query Frame = 0 
Query:   53 LSLGNSPQPLDELEGDXXXXXXXXXXXXXXXXXXXXXXXGAQEPSFRPPGLVRHESLPSLHLNARCLKCDAVGTIYCKGCEAHFCARHDQRRHRFLLRKNRHEHHAVPGISYFRIPRPDDDSSSPPLSEEDGGSENLEWVGSPGSAESPSAANVPPSFVGALRRDEVRLDISG 225
            +SL +SPQPLDELEG+     XXX                  E +F+ PGLVRHESLPSLHLNARC+KCDA+G IYCKGCEAHFCARHDQRRHRFLLRKNRHEH AVPGISYFRIP P+D + SP LS +  GS+N   +  P                G LR+ +V LD SG
Sbjct:    1 MSLDSSPQPLDELEGEPEQQEXXXQLSRAGGRGRRDL-----EEAFKAPGLVRHESLPSLHLNARCIKCDAMGIIYCKGCEAHFCARHDQRRHRFLLRKNRHEHQAVPGISYFRIPMPNDSTLSPSLSSD--GSDNQSPIPPPVGRRGVRTG-------GGLRQRDVELDYSG 159
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6992.15775.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JRH5_9PHAE1.690e-5156.90Hydrolase_4 domain-containing protein n=1 Tax=Ecto... [more]
D8LMU3_ECTSI4.660e-4557.23Hydrolase_4 domain-containing protein n=1 Tax=Ecto... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 62..82

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6992contigL-elsbetiae_contig6992:4263..9891 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6992.15775.1mRNA_L-elsbetiae_contig6992.15775.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig6992 4170..9891 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig6992.15775.1 ID=prot_L-elsbetiae_contig6992.15775.1|Name=mRNA_L-elsbetiae_contig6992.15775.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=225bp
MVFEQTERASIHAGDETEGVPPVKWKSVRRSLPGLIVGEDALSSDEFGGR
DCLSLGNSPQPLDELEGDGEEKQQQQQQQEEEDGGKGRGRGGAQEPSFRP
PGLVRHESLPSLHLNARCLKCDAVGTIYCKGCEAHFCARHDQRRHRFLLR
KNRHEHHAVPGISYFRIPRPDDDSSSPPLSEEDGGSENLEWVGSPGSAES
PSAANVPPSFVGALRRDEVRLDISG
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