prot_L-elsbetiae_contig6992.15774.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig6992.15774.1
Unique Nameprot_L-elsbetiae_contig6992.15774.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length250
Homology
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BLAST of mRNA_L-elsbetiae_contig6992.15774.1 vs. uniprot
Match: A0A6H5JWA9_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWA9_9PHAE)

HSP 1 Score: 122 bits (307), Expect = 2.290e-28
Identity = 138/300 (46.00%), Postives = 157/300 (52.33%), Query Frame = 0 
Query:    1 MSGRGGDAWEGEPRVIYHDVLDRIESLKTSRS------------------------------DDXXXXXXXXXXXXXNPSTNSEKRFVTFLFDLPPPEPFGETSGGGGGLPVISIIDAKGKERRKYYRRRELGPLEVGSVIVLRDRNLGTPLAAYFVGEEVDQMLIAGNGVACSPTLLGGNYREDW----ADEESERGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----------------IQLANKKRAALSREAALRELVGVGHGDGRDGTDDGGGDGAARGGLGAHELFRQV 249
            MS R G  WEGE RVIY DV  R+  L+  R+                                XXXXXXXX     N   +S KRFV+ +FD P     G  +     LP   ++DA GKERR  Y   ++GPL+VGSVIVLR    G  LAAY VGEE  Q+ I GNGVAC+PTLLG  +  D     A +ES RGXXXXXXXXXXXXXXXXXXXXXXX                          Q  N +RAA  R  ALRELVG+G G G  GT +GG  G ARG   AHELFRQ 
Sbjct:    1 MSAREG--WEGESRVIYEDVGARVSRLQARRAAAYFAGRKRESEKHVAGNNGGDKDIGSGSXXXXXXXXXXXRSGRGNALGSSGKRFVSLMFDPP-----GRYNEARHQLPEAFVVDATGKERRMPYYGLDIGPLDVGSVIVLRGAPRGQHLAAYLVGEEEHQVFIVGNGVACAPTLLGDGFLRDREATDASQESGRGXXXXXXXXXXXXXXXXXXXXXXXNGDDARRKPSAGKTRLSSSPDSGSRSQAKNLERAAHIRGEALRELVGIG-GGGAGGTSNGG-SGEARGAT-AHELFRQA 290
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BLAST of mRNA_L-elsbetiae_contig6992.15774.1 vs. uniprot
Match: D8LMU4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMU4_ECTSI)

HSP 1 Score: 63.5 bits (153), Expect = 7.690e-8
Identity = 34/66 (51.52%), Postives = 41/66 (62.12%), Query Frame = 0 
Query:   68 EPFGETSGGGGGLPVISIIDAKGKERRKYYRRRELGPLEVGSVIVLRDRNLGTPLAAYFVGEEVDQ 133
            +P G  +G    LP   ++DA GKERR  Y   ++GPL+VGSVIVLR    G  LAAY VGEE  Q
Sbjct:    3 DPPGRYNGARHRLPEAFVLDATGKERRMPYYGLDIGPLDVGSVIVLRGAPRGEHLAAYLVGEEEHQ 68
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6992.15774.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JWA9_9PHAE2.290e-2846.00Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
D8LMU4_ECTSI7.690e-851.52Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6992contigL-elsbetiae_contig6992:248..2818 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6992.15774.1mRNA_L-elsbetiae_contig6992.15774.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig6992 248..2830 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig6992.15774.1 ID=prot_L-elsbetiae_contig6992.15774.1|Name=mRNA_L-elsbetiae_contig6992.15774.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=250bp
MSGRGGDAWEGEPRVIYHDVLDRIESLKTSRSDDDDNNNNNGNGNGNNPS
TNSEKRFVTFLFDLPPPEPFGETSGGGGGLPVISIIDAKGKERRKYYRRR
ELGPLEVGSVIVLRDRNLGTPLAAYFVGEEVDQMLIAGNGVACSPTLLGG
NYREDWADEESERGRGEGPLGGGSGSGSGSRREASSGESPPSPSPIQLAN
KKRAALSREAALRELVGVGHGDGRDGTDDGGGDGAARGGLGAHELFRQV*
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