mRNA_L-elsbetiae_contig6986.15769.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig6986.15769.1
Unique NamemRNA_L-elsbetiae_contig6986.15769.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig6986.15769.1 vs. uniprot
Match: D8LCL4_ECTSI (ATP-dependent DNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCL4_ECTSI)

HSP 1 Score: 303 bits (777), Expect = 3.720e-91
Identity = 164/247 (66.40%), Postives = 178/247 (72.06%), Query Frame = 1 
Query:  112 PSMQFASYDGNHRTVELLRESVYLTDMDLTRYLPECADNLSREFKMDILPAGARCAMQHMPRESRPFLGPNLYVTPPGSWTRFHQDGNGTVDSGHQCLAGRNRVIMLRRLRDEKDKHTALRILSGAGEGGGSAGPPAGSGKGGAAISPHDTRLLGGSKERNGGGVAREGGAGGMEAEAGAEAEGDDDSPLYKPPHSDGEKPPWPSDEAVERLRELNFCPSVFTLEPGEFVHINKGRLHAFRKEHPLP 852
            PSM+F SYDGN+RT+ELLRE+VYLTDMDLTRYLPECA+NLSREFKMDILPAGARCAMQHMPRESR F+GPNLY+TPPGSWT+ HQDGNGTVDSGHQCLAGRNRVIMLRRL  E+DK  ALRIL                 K G  +  H     G                           E + DS L++ PH DG  PPWP+DEAVERLRELNFCPSVFTLEPGEFVHINKGRLHAFRKE PLP
Sbjct:  240 PSMRFMSYDGNNRTLELLREAVYLTDMDLTRYLPECANNLSREFKMDILPAGARCAMQHMPRESRTFMGPNLYITPPGSWTQCHQDGNGTVDSGHQCLAGRNRVIMLRRLDREEDKRAALRILXXXXXXXXXXXAEMNGDKPGTPVVSH-AGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXEKERDS-LFRMPHCDGATPPWPTDEAVERLRELNFCPSVFTLEPGEFVHINKGRLHAFRKEDPLP 484
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BLAST of mRNA_L-elsbetiae_contig6986.15769.1 vs. uniprot
Match: A0A7S2DKI0_9STRA (Hypothetical protein (Fragment) n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DKI0_9STRA)

HSP 1 Score: 207 bits (527), Expect = 3.410e-62
Identity = 106/231 (45.89%), Postives = 136/231 (58.87%), Query Frame = 1 
Query:  154 VELLRESVYLTDMDLTRYLPECADNLSREFKMDILPAGARCAMQHMPRESRPFLGPNLYVTPPGSWTRFHQDGNGTVDSGHQCLAGRNRVIMLRRLRDEKDKHTALRILSGAGEGGGSAGPPAGSGKGGAAISPHDTRLLGGSKERNGGGVAREGGAGGMEAEAGAEAEGDDDSPLYKPPHSDGEKPPWPSDEAVERLRELNFCPSVFTLEPGEFVHINKGRLHAFRKEHP 846
            + +L E +Y+ D D+ +YLPE   +L+R  K+D+LP G RC ++H+P    PF+GPNLY+TPPG++T FHQDG+GTVDSGH CL GRN V+MLRRL DE +K  ALRIL+G+                      +D                                       LY  PH+DG+KP WP+   +E LR+LN+CPSVFTLEPGEFVHINKGRLHAFRK+ P
Sbjct:   39 IPVLEEGIYMIDFDVPKYLPELQADLTRHLKLDLLPRGERCMLRHLPLNGHPFMGPNLYITPPGTFTHFHQDGHGTVDSGHLCLRGRNEVVMLRRL-DEPNKLRALRILNGS-------------------CLNYDA--------------------------------------LYGMPHNDGQKPSWPTPSQIESLRDLNYCPSVFTLEPGEFVHINKGRLHAFRKKIP 211
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BLAST of mRNA_L-elsbetiae_contig6986.15769.1 vs. uniprot
Match: A0A7S2SQY1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SQY1_9STRA)

HSP 1 Score: 203 bits (517), Expect = 9.150e-56
Identity = 114/254 (44.88%), Postives = 142/254 (55.91%), Query Frame = 1 
Query:  103 AEEPSMQ--FASYD--GNHRTVELLRESVYLTDMDLTRYLPECADNLSREFKMDILPAGARCAMQHMPRESRPFLGPNLYVTPPGSWTRFHQDGNGTVDSGHQCLAGRNRVIMLRRLRDEKDKHTALRILSGAGEGGGSAGPPAGSGKGGAAISPHDTRLLGGSKERNGGGVAREGGAGGMEAEAGAEAEGDDDSPLYKPPHSDGEKPPWPSDEAVERLRELNFCPSVFTLEPGEFVHINKGRLHAFRKEHPLP 852
            +EEP  Q  F + D  G    V +L E +YL D DL ++LPE   +L R FK+D+LP G RC  +H+P    PF+GPNLY+TPPG++T FHQDG+GTVDSGHQCL GRN V+MLRR+ DE +K  ALRIL          G P+           +D                                       LY  PH  GEKPPWP++  ++ LR   +CPSVFTLEPG++VHINKGRLHAFRK  P P
Sbjct:  607 SEEPQSQPLFEATDSAGKKVDVPVLDEGLYLIDFDLPKHLPELFCDLERNFKVDLLPRGRRCLFRHLPLRGHPFMGPNLYITPPGTFTHFHQDGHGTVDSGHQCLRGRNEVVMLRRM-DEPNKRHALRILC--------KGCPS-----------YDA--------------------------------------LYGKPHDAGEKPPWPTETQIDELRRRGYCPSVFTLEPGDYVHINKGRLHAFRKRSPPP 802
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BLAST of mRNA_L-elsbetiae_contig6986.15769.1 vs. uniprot
Match: A0A448ZRZ6_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZRZ6_9STRA)

HSP 1 Score: 179 bits (455), Expect = 2.110e-47
Identity = 99/247 (40.08%), Postives = 132/247 (53.44%), Query Frame = 1 
Query:  106 EEPSMQFASYDGNHRTVELLRESVYLTDMDLTRYLPECADNLSREFKMD-ILPAGARCAMQHMPRESRPFLGPNLYVTPPGSWTRFHQDGNGTVDSGHQCLAGRNRVIMLRRLRDEKDKHTALRILSGAGEGGGSAGPPAGSGKGGAAISPHDTRLLGGSKERNGGGVAREGGAGGMEAEAGAEAEGDDDSPLYKPPHSDG--EKPPWPSDEAVERLRELNFCPSVFTLEPGEFVHINKGRLHAFRK 837
            +EP   F  Y G   T+ +   ++Y+ D+D++R +P   DN    F++  +LP G+ C M  +  E+RPF+GPNLYVTPP S+T FHQDG+GTVDSGH C++G N V+MLRRL +   KH AL ILSG+                       D+   G                                  LY  PH DG  +KPPWP+ + +E  R++ +CPSV  LEPG+ VHINKGRLHAFRK
Sbjct:  604 DEPQFTFCDYQGKTHTIGVRTSALYMIDVDMSRLVPLLNDNFLESFELPAVLPGGSHCMMNSVTPEARPFMGPNLYVTPPASFTHFHQDGHGTVDSGHLCISGYNEVVMLRRLTERHKKH-ALWILSGS--------------------RTDDSHFDG----------------------------------LYSMPHGDGLGKKPPWPTKDMLEDCRKMGYCPSVLILEPGDLVHINKGRLHAFRK 795
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BLAST of mRNA_L-elsbetiae_contig6986.15769.1 vs. uniprot
Match: A0A7S4EEL1_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4EEL1_9STRA)

HSP 1 Score: 175 bits (443), Expect = 8.620e-46
Identity = 97/247 (39.27%), Postives = 128/247 (51.82%), Query Frame = 1 
Query:  106 EEPSMQFASYDGNHRTVELLRESVYLTDMDLTRYLPECADNLSREFKMD-ILPAGARCAMQHMPRESRPFLGPNLYVTPPGSWTRFHQDGNGTVDSGHQCLAGRNRVIMLRRLRDEKDKHTALRILSGAGEGGGSAGPPAGSGKGGAAISPHDTRLLGGSKERNGGGVAREGGAGGMEAEAGAEAEGDDDSPLYKPPHSDG--EKPPWPSDEAVERLRELNFCPSVFTLEPGEFVHINKGRLHAFRK 837
            EEP   F  + G   T+ +   ++Y+ D D+ R  P   +N  + F++  +LP G+ C M  +  ++RPF+GPNLYVTPP S+T FHQDG+GTVDSGH C++G N V+M RRL +   KH AL ILSG                                                         EG     LY  PH DG  +KPPWPS++ VE  + + +CPS+F LEPG+ VHINKGRLHAFRK
Sbjct:  589 EEPEFTFEDHQGKTHTLGVWTSALYMIDFDMNRLTPLLNENFLKSFELPAVLPGGSHCMMNSVTADARPFMGPNLYVTPPASFTHFHQDGHGTVDSGHLCISGFNEVVMFRRLTERHKKH-ALWILSGK------------------------------------------------------ITEGYHFDGLYSVPHGDGLGKKPPWPSNDMVEECKTMGYCPSIFILEPGDLVHINKGRLHAFRK 780
[Close]
BLAST of mRNA_L-elsbetiae_contig6986.15769.1 vs. uniprot
Match: A0A1E7FK00_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FK00_9STRA)

HSP 1 Score: 169 bits (429), Expect = 6.140e-44
Identity = 98/247 (39.68%), Postives = 131/247 (53.04%), Query Frame = 1 
Query:  106 EEPSMQFASYDGNHRTVELLRESVYLTDMDLTRYLPECADNLSREFKMD-ILPAGARCAMQHMPRESRPFLGPNLYVTPPGSWTRFHQDGNGTVDSGHQCLAGRNRVIMLRRLRDEKDKHTALRILSGAGEGGGSAGPPAGSGKGGAAISPHDTRLLGGSKERNGGGVAREGGAGGMEAEAGAEAEGDDDSPLYKPPHSDG--EKPPWPSDEAVERLRELNFCPSVFTLEPGEFVHINKGRLHAFRK 837
            EEP   F  + G   ++ +   ++Y+ D+D+ R +P   +N    F++  +LP G+ C M  +  E+RPF+GPNLYVTPP S+T FHQDG+GTVDSGH C++G N VIMLRRL +   +H AL ILSG                                K+ NG                 +  EG     LY  PH DG   KP WP+ + VE  + + +CPS+ TL PGE +HINKGRLHAFRK
Sbjct:  581 EEPMFSFEDHVGKTHSLGVWTSALYMIDVDIMRLMPLLNENFLESFELSSVLPGGSHCMMNSVTPEARPFMGPNLYVTPPASFTHFHQDGHGTVDSGHLCISGFNEVIMLRRLTERHKRH-ALWILSG--------------------------------KQPNG-----------------SHFEG-----LYSVPHGDGLGSKPKWPTMDMVEECKRMGYCPSLLTLGPGELIHINKGRLHAFRK 772
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BLAST of mRNA_L-elsbetiae_contig6986.15769.1 vs. uniprot
Match: A0A7S1ZIK7_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZIK7_9STRA)

HSP 1 Score: 167 bits (423), Expect = 4.150e-43
Identity = 98/244 (40.16%), Postives = 133/244 (54.51%), Query Frame = 1 
Query:  124 FASYDGNHRTVELLRESVYLTDMDLTRYLPECADNLSREFKMD-ILPAGARCAMQHMPRESRPFLGPNLYVTPPGSWTRFHQDGNGTVDSGHQCLAGRNRVIMLRRLRDEKDKHTALRILSGAGEGGGSAGPPAGSGKGGAAISPHDTRLLGGSKERNGGGVAREGGAGGMEAEAGAEAEGDDDSPLYKPPHSDG--EKPPWPSDEAVERLRELNFCPSVFTLEPGEFVHINKGRLHAFRKEHP 846
            +   +G  ++V ++   +Y+ D D+ + LP   ++   +FKM   LP G  C M  +    RPF+GPN+Y+TPPGS+T FHQDG+GTVDSGHQCL+G N V+MLRRL  E+ K  AL++L G G G                      + L                   M+ +A           LY  PH DG  E+P WP  E++ER R++N+ PSVF L+PG+ VHINKGRLHAFRK  P
Sbjct:  672 YDDVNGETKSVNVVDVVLYMIDYDMVKLLPPLYEDFINKFKMPGCLPGGIHCMMNSVNAGGRPFMGPNIYLTPPGSFTHFHQDGHGTVDSGHQCLSGYNEVVMLRRL-TERHKQHALQLLRGEGNG----------------------QTLSN-----------------MQYDA-----------LYGLPHEDGCGERPMWPDCESIERCRKMNYYPSVFILKPGQHVHINKGRLHAFRKLSP 864
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BLAST of mRNA_L-elsbetiae_contig6986.15769.1 vs. uniprot
Match: B8CCF4_THAPS (RanBP2-type domain-containing protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CCF4_THAPS)

HSP 1 Score: 165 bits (417), Expect = 2.460e-42
Identity = 96/258 (37.21%), Postives = 132/258 (51.16%), Query Frame = 1 
Query:  103 AEEPSMQFASYDGNHRTVELLRESVYLTDMDLTRYLPECADNLSREFKMD-ILPAGARCAMQHMPRESRPFLGPNLYVTPPGSWTRFHQDGNGTVDSGHQCLAGRNRVIMLRRLRDEKDKHTALRILSGAGEGGGSAGPPAGSGKGGAAISPHDTRLLGGSKERNGGGVAREGGAGGMEAEAGAEAEGDDDSPLYKPPHSDGEKPP--WPSDEAVERLRELN-------FCPSVFTLEPGEFVHINKGRLHAFRKEHP 846
            AE  +  F+  +GN + +++ +  +Y+ D+D+ + LP+  ++  R FK+  ILP G+ C M  +    RPF+GPNLYVTPP S+T FHQDG+GTVDSGH C  G N V+MLRRL  E+ KH ALR+L+G                   + S H T                                      LY  PH D    P  WP+ +A+   +++        +CPSVF L+PG+ VHINKGRLHAFRK  P
Sbjct:  564 AESTTYSFSDSNGNEQAIDVSKVVLYMVDVDMIKLLPQTYEDFRRNFKLPGILPGGSHCMMNAVNEGGRPFMGPNLYVTPPSSFTHFHQDGHGTVDSGHHCREGYNEVVMLRRL-TERHKHHALRLLNGT------------------STSSHST--------------------------------------LYGLPHRDDHDTPLSWPTKDAISECKKMGWVLLVAKYCPSVFVLKPGQTVHINKGRLHAFRKLAP 764
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BLAST of mRNA_L-elsbetiae_contig6986.15769.1 vs. uniprot
Match: A0A7S3Q867_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q867_9STRA)

HSP 1 Score: 163 bits (412), Expect = 1.170e-41
Identity = 97/231 (41.99%), Postives = 126/231 (54.55%), Query Frame = 1 
Query:  148 RTVELLRESVYLTDMDLTRYLPECADNLSREFKMD-ILPAGARCAMQHMPRESRPFLGPNLYVTPPGSWTRFHQDGNGTVDSGHQCLAGRNRVIMLRRLRDEKDKHTALRILSGAGEGGGSAGPPAGSGKGGAAISPHDTRLLGGSKERNGGGVAREGGAGGMEAEAGAEAEGDDDSPLYKPPHSDGEKPPWPSDEAVERLRELNFCPSVFTLEPGEFVHINKGRLHAFRK 837
            RT +  R+ +YL DMDL R LPE  ++  + F++   LP G  C M  +    RPF+GPNLYVTPPGS+T FHQDG+GTVDSGH C+ G N VIMLRR+  E  K  AL +L                         ++ R     +++N            +  +A           LY  PH DG+KP WP  EA++   ELN+ P VF L+PG+F+HINKGRLHAFRK
Sbjct:  490 RTFDPRRDYLYLLDMDLKRTLPESHNDFLKNFRLPKCLPGGDFCMMNSVNDLGRPFMGPNLYVTPPGSFTHFHQDGHGTVDSGHMCIDGYNEVIMLRRM-SEDHKRQALHLLH------------------------YNDR-----RQKN------------IHYDA-----------LYGLPHHDGKKPLWPDHEAIKNCDELNYYPCVFILKPGQFLHINKGRLHAFRK 667
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BLAST of mRNA_L-elsbetiae_contig6986.15769.1 vs. uniprot
Match: A0A7S2VFF2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2VFF2_9STRA)

HSP 1 Score: 144 bits (363), Expect = 1.050e-38
Identity = 86/213 (40.38%), Postives = 109/213 (51.17%), Query Frame = 1 
Query:  208 LPECADNLSREFKMD-ILPAGARCAMQHMPRESRPFLGPNLYVTPPGSWTRFHQDGNGTVDSGHQCLAGRNRVIMLRRLRDEKDKHTALRILSGAGEGGGSAGPPAGSGKGGAAISPHDTRLLGGSKERNGGGVAREGGAGGMEAEAGAEAEGDDDSPLYKPPHSDGEKPP--WPSDEAVERLRELNFCPSVFTLEPGEFVHINKGRLHAFRK 837
            LP+  ++L   FK+  ILP G+ C M  +    RPF+GPNLY+TPP S+T FHQDG+GTVDSGH CL+G N V+MLRRL  E+ K  AL +L+G                     S H +                                    S LY  PH D   P   WP+  A+   +E+ +CPSVF L+PG+ VHINKGRLHAFRK
Sbjct:    1 LPKSFEDLQNNFKLSSILPGGSHCMMNAVNINGRPFMGPNLYITPPSSFTHFHQDGHGTVDSGHLCLSGYNEVVMLRRL-PERHKCRALELLNG---------------------SSHSSY-----------------------------------SALYGLPHRDDLDPSLGWPTKGAIRFCKEMGYCPSVFILKPGQMVHINKGRLHAFRK 156
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6986.15769.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 20
Match NameE-valueIdentityDescription
D8LCL4_ECTSI3.720e-9166.40ATP-dependent DNA helicase n=1 Tax=Ectocarpus sili... [more]
A0A7S2DKI0_9STRA3.410e-6245.89Hypothetical protein (Fragment) n=2 Tax=Dictyocha ... [more]
A0A7S2SQY1_9STRA9.150e-5644.88Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A448ZRZ6_9STRA2.110e-4740.08Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A7S4EEL1_9STRA8.620e-4639.27Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]
A0A1E7FK00_9STRA6.140e-4439.68Uncharacterized protein n=1 Tax=Fragilariopsis cyl... [more]
A0A7S1ZIK7_9STRA4.150e-4340.16Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
B8CCF4_THAPS2.460e-4237.21RanBP2-type domain-containing protein (Fragment) n... [more]
A0A7S3Q867_9STRA1.170e-4141.99Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A7S2VFF2_9STRA1.050e-3840.38Hypothetical protein (Fragment) n=1 Tax=Skeletonem... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6986contigL-elsbetiae_contig6986:819..8048 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score309.7
Seed ortholog evalue1.4e-81
Seed eggNOG ortholog2880.D8LCL4
KEGG koko:K15255
Hectar predicted targeting categoryother localisation
EggNOG free text desc.G-quadruplex DNA unwinding
EggNOG OGsCOG0507@1,KOG0987@2759
EC3.6.4.12
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03029,ko03032
Exons5
Model size852
Cds size852
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6986.15769.1prot_L-elsbetiae_contig6986.15769.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig6986 819..8048 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816774.5706916-CDS-L-elsbetiae_contig6986:818..9171622816774.5706916-CDS-L-elsbetiae_contig6986:818..917Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6986 819..917 -
1691683803.2459986-CDS-L-elsbetiae_contig6986:818..9171691683803.2459986-CDS-L-elsbetiae_contig6986:818..917Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6986 819..917 -
1622816774.5813177-CDS-L-elsbetiae_contig6986:3798..40171622816774.5813177-CDS-L-elsbetiae_contig6986:3798..4017Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6986 3799..4017 -
1691683803.2597072-CDS-L-elsbetiae_contig6986:3798..40171691683803.2597072-CDS-L-elsbetiae_contig6986:3798..4017Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6986 3799..4017 -
1622816774.5911567-CDS-L-elsbetiae_contig6986:5513..57001622816774.5911567-CDS-L-elsbetiae_contig6986:5513..5700Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6986 5514..5700 -
1691683803.274372-CDS-L-elsbetiae_contig6986:5513..57001691683803.274372-CDS-L-elsbetiae_contig6986:5513..5700Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6986 5514..5700 -
1622816774.601836-CDS-L-elsbetiae_contig6986:7057..72011622816774.601836-CDS-L-elsbetiae_contig6986:7057..7201Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6986 7058..7201 -
1691683803.2826838-CDS-L-elsbetiae_contig6986:7057..72011691683803.2826838-CDS-L-elsbetiae_contig6986:7057..7201Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6986 7058..7201 -
1622816774.6118934-CDS-L-elsbetiae_contig6986:7845..80481622816774.6118934-CDS-L-elsbetiae_contig6986:7845..8048Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6986 7846..8048 -
1691683803.2908287-CDS-L-elsbetiae_contig6986:7845..80481691683803.2908287-CDS-L-elsbetiae_contig6986:7845..8048Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6986 7846..8048 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig6986.15769.1

>prot_L-elsbetiae_contig6986.15769.1 ID=prot_L-elsbetiae_contig6986.15769.1|Name=mRNA_L-elsbetiae_contig6986.15769.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=284bp
CDVANGGGEAAAAAGRPSGGVESQQQGQEREERGAEEPSMQFASYDGNHR
TVELLRESVYLTDMDLTRYLPECADNLSREFKMDILPAGARCAMQHMPRE
SRPFLGPNLYVTPPGSWTRFHQDGNGTVDSGHQCLAGRNRVIMLRRLRDE
KDKHTALRILSGAGEGGGSAGPPAGSGKGGAAISPHDTRLLGGSKERNGG
GVAREGGAGGMEAEAGAEAEGDDDSPLYKPPHSDGEKPPWPSDEAVERLR
ELNFCPSVFTLEPGEFVHINKGRLHAFRKEHPLP
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mRNA from alignment at L-elsbetiae_contig6986:819..8048-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig6986.15769.1 ID=mRNA_L-elsbetiae_contig6986.15769.1|Name=mRNA_L-elsbetiae_contig6986.15769.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=7230bp|location=Sequence derived from alignment at L-elsbetiae_contig6986:819..8048- (Laminarionema elsbetiae ELsaHSoW15)
TGTGACGTGGCGAATGGGGGAGGAGAGGCGGCGGCGGCGGCGGGGCGGCC
AAGCGGAGGCGTGGAGAGCCAGCAGCAGGGGCAGGAGCGCGAGGAGCGGG
GGGCAGAGGAACCCAGCATGCAGTTTGCGAGCTACGACGGGAATCACCGG
ACGGTGGAGCTCCTGCGGGAGTCGGTGTACCTGACCGACATGGACCTGAC
GAGGTGTGTGATCCACGGGACCCTGTGTGCGTGTGTGTGTGTGCGTGCGT
GTTTTCTAAAGTAGCATCGAACGCGCTCTAACCGGTTGACCATTGAAAAT
ACGCCAGCTTTAAGGGGGCGAAAGCCGGAACAAGGCTTTCCCAAGTTTTA
ACTCTACCTTTACAGCGGGCACAAAGTTGTGTGTGTGCGCGTGTGTGCGC
GTGTGTGCGCGTGCGTGTGTATATGAGTGTGTACGTGTGTGTTGTGTGCT
TTGTCACTCAGCATCGACCGCGCTAACCTGTTGGCCAATGAAAATACGCC
AGCTTTTGGAGGGCCAAAAAGGAAACAAGGCTTTCCTGAGTGTTTGGACC
TCTTGGTGTGTGCGTGTGTGTGTGAGGGGGGGGGAGAGGGAGAGAGGGAG
AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAATATACCGTG
CTGCTATTTTATCGTTCGCGGTACACCGGTCGAGATGGAGATGCGGGGGG
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGCACGGTGTCTACATCTCACAC
ACACATACCCTATTTACGTGTGCGCCTCCCTCGTGCCGGGCATCAAGGTA
TCTCCCCGAGTGCGCCGACAACCTCAGCCGCGAGTTCAAGATGGACATCT
TGCCGGCCGGGGCCCGGTGCGCCATGCAGCACATGCCTCGCGAGAGCAGA
CCCTTCCTCGGCCCCAACCTTTACGTCACCCCTCCGGGGAGGTGGGTGGG
CAGCGGCGGCCATGTACAATAAGAAGAAGTCGTGGCCGAAAAATGTATGC
GTCTACCTACCTGCCTGCCTGTGCCAGGGGGGTCTGGGGGGGGGGGGGAG
AGAGCGGGCGGTGCACGGCGGGGACTGCTGCTGCTGCTGTTTGAAACTGT
TGTACCGTGGACGGCCCCACCACAAGAAGACTTGCCGTGTCGTGGTGTAC
AGCGCGATTCGCGCAATTTTTTTCGGGCAGGATGCAGACGCTATTTATTT
AGCTAGCCTTGAGTCGCTATTGTACCAACTCTGACCCGGCAGCACCGCGG
TGTTCCTGGCTGCGTGGCCCCGCGGAGGGATTGGATTGGATTGGCGGCGA
GATCAGCACAAACCGCTCCAGCGGCCCCCGCCGAGGGATTTGATTGGGGG
CGAGATCAGCAAGCACAAACCGCCCCAGCAGCCCCTCCCCTATCACCCCT
CTCCCCCCTCTCACTCAACCCAACCACACAGGAGTAGGTAGGTATGGTAG
CGTACGTGAAGAGGTGTTTCCCCCCATGTTCTCTCCATCACATTACGGGG
CCCCTTCCGGCGCACAGCAGACCAGCCGTTCTGCGAGGAAGAGGCGAGGC
GCACTTGTTCCAAGAATTTCGCGGACGGGTGTCGTGCCCACCCCAGTTCC
CCCCTGAATGCGTGCATGCTTACGTATGCATCCTGCCTCAAAACCTTGCC
TGTCTGTTCCAGCCGTGCGCACACGGCTCTTGTTGTTTGTGCGATGCGGT
ACAGCAAGATCTTCGTGAAACACGTAGGGGGAGACGGTGAAATATTCTTA
AATTTTAGGTGTTTTTTTTGTTCTCGGCCGGCCCAATGTTACGTCACTAG
ATGGAATACCGGTTGAGTCTCACGGGGTCCCGTCTCATGTGGGACTTAGG
TTCCATTTTTGGTTAACTGTTTTTTCAGCAGTTAGACTACCGTAATCATG
CGAAGGTTCGCACCCCCGTGTTTGCGTTTTTCTATAGCGTATTTCTCCAC
AACCAGGAGGGTACCACTGCCGAAAAGGGTGGTTTTCCAAACGTCTCGTC
GGGGGCTTTCCAGAGAGGTATCAGTTAGTGTTCGCGCCCTCCTGGTTGTG
GAGAAATACGCTTTAGAAAAATGCTAACACGGGGTTCGGACCTTCTCATG
TAGACTATACAGACCATACATGCGTATTTTGGTGGTGCTTTGTCTCGATA
TCCTCGGTTTCCCTTTTCATCTTCGCCGCCGCCGACAACGCCAATGACGA
TGTTGTTGTTTGTTGCCGGTGTTGTTGTTGCTGTTGTTGTTGTTGTTGTC
GTTGCTACCGTCGTTGATGGCGTTGATGATGGAAACGGGGACTGTCAGCT
GGACCCGGTTCCACCAAGACGGCAACGGGACTGTCGACTCCGGGCACCAG
TGTCTGGCGGGCCGGAACCGCGTGATCATGCTCCGCCGCCTCCGCGACGA
GAAGGACAAGCACACCGCGCTCCGAATACTGTCGGGGGCGGGGGAAGGAG
GAGGAAGCGCGGGGCCCCCGGCGGGAAGCGGCAAGGTACGTACGTACATA
CCGTAGGTGACACAAGATACCACACCCCCTGAATCGAACTTTAGAGCTCC
ATTACCCCGCAACGAAGAGGGTGCTAGCACCAAACAACACATTTTGGGAC
AGCTTTCGACTAGATCTTTCCAACGCCACCCCTTTTCGGCACTGGCACTC
TTCTTCTTGCTGGGGAGGAATGGGGCTTCGAAAATCTTAATCTTTCCAGG
GGGTGTGGTATCTTGTGTCACCTACGGTAAGACGGCGAAGACGAGGAGGA
GGAAGAGGCAGAGGAAGAAGAGAAAGAGGAGGAGCGTTCGCTTTTAGTTA
ACGTATACGTACGTACAAATGTCAGCAATCTGCGTATCTTTTATCGTGTT
GGCCTGCTTTTGAGGTTTTTTGCGACGGTCAAGCTCTTTTGGGTTTGGCG
GTGGAGGTCGACCCAACGACGCCTTCTTTTCGCACGCACACAATGGTAGC
AGCAGTAGCGGCAGCAGCAGTAGCGGCGGCAGCAGCAGCAGCAGCCCCGG
TTGCCGTAAAGGAGGGGAGTTTTCCGCACGCCCCCTGGACCGATCTTTTA
AAGCTCGATTTCTCCTGAATGTATTCTACATAAACAGCGAAGAAGATTGT
CCGTGTGTCGAAAAAAAGGATTGCGTTTGGGAAAGATCTCGTCGATTAAA
ATGCTGTCCAAAGAGCGTGTCGTCTGGTGTCGGGGCACCCTCCCTCTTCG
TTGCTGCGAACTATTTATTTTTAGGCGAGCCCTAAAAATCGGCCCAGTGG
TTGTGCGGAGAACTCGCATCCTTTACGATACGGTAGATGACGTCGCCGTG
CCTGGCGTAATAAGTCCGACCAGACCATAAGACCAGACCCGGGAGGAGGA
GTGACGGTTACAGCAACAGGTTATCACCTCCAGGCAGATGATTTAGATCT
GCGAAGTACGTACTCCTGGATTGTTTTTGTCTATGGATAGATCTCTCGAT
CGGGTGGCGCTTTTTTTATTTTTTGCTTCTGGGAGTTCTAAGTCACGAAT
CATGGTTCATCTTGCGTTCAACCCCATCCCCCCCTGCACTCACCCCGCGC
CCAACTCGAGCTTTCGCCTTCTTTCACTCTCTGAGAGTTTTGCATTCTTT
CCTCCCACCCCTAAATACCTACCCCCACCCCTAGACCTGCCGCAAGCAAG
TGCGACCCCCCCCCCCCCCCCCCCCCCCCCCCCCGCCCGGCCGCCCCTCC
CCCCCCCCCCCCCCCCCCACCCCCCCCGCCAGCAAGGGCCCCCCCCCCCC
CCCCCCCCCTGCGCTCGAGAGTTTGGTAGGTTACTCCGCCAGTCCAGACG
CCCCCACCGCCTTCATTCACATCGCTCTCAGTCCCGCCGCCTCTGGAGCC
AAAACCCTGACCCCCCTCCCCCCCCCACCTGACCGCCACCATGTCCCCCC
CCCCCGTCGTCTCAGACGAACGGGAACGGGATCCCGAGCGCCGGCCTTGT
CGCCGGGGGCACCGCGGCGGTTTCCCCAGAGGGGGGCGCCGCCATCTCGC
CGCACGACACACGCCTGCTGGGGGGCTCGAAGGAGCGGAACGGGGGGGGC
GTTGCGCGCGAGGGGGGGGCGGGGGGGATGGAGGCGGAGGCGGGGGCGGA
GGCGGAGGGAGATGACGACAGTCCGCTGTACAAGCCCCCCCATTCCGACG
GGGAGAAGCCGCCGTGGCCTTCTGATGAGGCGGTGGAGAGGCTCCGCGAG
GTGAGAGGTAGGGGGGGGGTGAGATGGAGGGTGTGATGTTGTGTTGTGTT
GTTTGTTCGTGTGTGTGTGTGTTGTTTTCTTCCCATAGAAGGTCTAAGCA
TTATCTTTTGTCTCCCCGCACTATATTCGAGGAAATTTCTACAAGGCTCG
CACGCTCTCTCTCAGGCCACCGGAATTTTTCACTTGAAATTAGACTGAGA
ATCATGTGGTCTGAACGCTGTCGATGGCTGACGTGCCAGAACACGCCGTG
CGTTCGTTTTCCCGATTTTATCACCGGGAGAAGAGCGTTTCGATCGATCG
GGGTTGCCCCACGGCGCTCTCCACTTCGAGTCCATTGCCCTCTGTGCCTG
TGTTTCTCTCTCTCTCTCTTTCTCTTCTCTTTTTCGGCTGTCGCTTGGTG
ACGCATTCCGCCTCTGTCTCGCTGGCTCTCTTCTGTTCGAGCTCGGGGGG
TTGTTGCGTGAAGCATAGTGCGTCCACGATTCATTCGGCAGTTCGCTTCA
CTCCAATTCCATCGTTTGCTCTCTACGTCTCTGTGTTTGTCGTGTGGTTT
CCTTTTCTCTGGGCTCTGGCTGTGTCACGACGGTACTTTGCTCTCTGTGT
CCTTTTTGCCCCGCGGTTGGAATTTTTAGACGGGTAATTAAAAGAGGTAA
GCGGTTCTGTTTTGCAGCTTTCCGTTGAATGCGCATACATGAGCGGTTCC
TTTTTTTTGCCCGGAGTTGTGGTTGTTGTTGTGTTGTCGCTAGTTGTTGT
CTCTAAGATACAAACATTTTTCACGCACGCAGTACGGAGGAGGTGGTATA
TACGCGAAGCCTTTCGTCGCGGTGGAGTTATTGGTCAATCAATTGACGGG
TAAATAGATGTGGTTATTTTGTTGTGCAGCTTGCGGCTTACATCATCACC
TGTTCTTATTTTTTGTACTACGTGACGAGATGAGACTCTCCGCGTGTTTT
CTTCTGCTTGGTGGTTTCTCGCCATTTTGGGTCGATATTTAGGACGAGTC
GCGCGGGTTGCCAAAAGCTTCATGCTGGGACTTCAGCATGGCGGCATAAG
CCGCCAAAATAAGCCTCTTTTTATGTGGGCGGTTCCTCTTTTCCATGTAT
GAGCTGTTTGTGTGATGTTCTCTCGGTCATCGCGCACGCGTGTTGTCTGT
TCCTTTTGGGCCGATTCAGTGTATCTATAATATACAGCTACATGTGTACA
TGTAGTCTATGCATCGCCGTTTCAGGGCTGGTTGGCATTTTTTACGGTTT
GTCGCTCTCTCTCAGCAAAACTCTCGGTGTTTGCCTTGAATCCTCTGGAC
ACTGGCATCCACATTATGCGAATGTATACACATGCAAACAAACCTTTTCG
CATCTCACGCATGTGAACACACCACTCTCGTGCATCTTGGGACCCGCGGT
CTAGTTAGCGTGGCGGCGTCAGCCGTCGAAAAACTTGTGTTTACATGTAT
TTTGGCTGGGGTTGGTCGGTCTCCGCCTCTCGGTATGCATATGTTTGTTG
ACTTGTCAGCCGTGGCGCATCAGCTGGGGTTACAACCGGGGTTACAGCCA
GGGGTTGCACGGGAGGGGATTAACATACCAAGTTTGTGTGTGTGTTGTGT
GTGTGTGTGTGTGTGTGTGTTGTGTGTGTGTGTGTGTGTGTGTGTGTGCG
TTTATGTGTGTGCGTGCATGTGTGTGTGGGCGTGCGTGCGTGTGTGTGTG
TGTGTGTGGGTGTGGGTGTGTATGTACGGGTGCGGATGCACTCGGGTTTT
GCCGACCCTCTTTGGCCATTTTTAGTTCCTGGTGCCGCTTCTTACCACTT
CCACGATATACACGATAGAACGATAGACGGGGCTTACGCTCTTGACGTTG
ATCTATGTAGGAGGCGCCAGGGAGCAGTAGCATTCGATGCCGTCTGGTGT
AGGCTATCTAAGCTACGGGGGCAAAAGTTTGTGTGTAGTAAGTACGTGTG
CAGGCTTTGGTCCTGCGGTGTGGCGGTGCCGAAAAGCCCCAAGATGAAGA
ACCTGGGATGTAAGTAAAATGGAGGCTATCTTTTATGTTCTGAAAGATAA
AATCAGATACATACTCAAAAACGGAAACTAACCCACATTTGAGACGGGAC
CCCGTGGGGTTCAACCGCGGTATTCCATTATAGTGACGTCATAGGCTTTG
GTCCGGCCGAGTAGGAAAACACTAAAATGCCCCAAGAACCCAACATCTCC
CCTGCAGAGTTAGTTCTCCCCTGCAGAGTTAGTTCTTTCTGCCTGGCCAA
CCAATATGTATTTAGGAGAGGAACCCGCCGTGATGTCGTGATGTTTTTTT
TTTTTTTTTTTTTTTTTTTCATCGTGGGTTTTGTTGTTTTGTCTTTCTCC
TCGGTGGGGGCGTGGGTCGGTAGTTGCTGCTTCCTGTTTTTGTTATNNNN
NNNNNNGGGCCAACAAAAAAAAAAAAAAAAAAGAACCCCCCCATACTCCC
TTCTTTTTTTTTTTTTTTTTTTTTTGTCGACACCGCGGATCTGGTCGAGG
TGTCTCTCGCGCACGGGGGCGAGTGCGTCCGTCATTCATCGTCCCATTGT
GTGTTACCTGTCCAGCTTGCTCCGGCCGCCCTACCCCTGTTGTCTGCTCA
CGAGAGAGCTGGTATCTGCACGGCGTTATTTTTGCATACTGTTGTACTCG
GGGAGTATTCGTATTATTTACAAAGCTTGAAGTGTTTTGAGCACCCGGAG
TGTCCATCTGCCGGCACCAATGACCCCCCCCACCCATCCACCCACCCACC
CCCTCTCTCACCCACTCGCAGGGCCGCGCATGCCGTTTCTCCTTACCGCC
GAATGTTCTTAATGTTACCGCTGTTGCCTGTTTTTTTTTTATCTGCCCCC
TCCTCCGCACCCCGGCCCTCCCTCGTCCCAGCTGAACTTTTGCCCCAGCG
TGTTCACCCTGGAGCCCGGGGAGTTCGTGCACATCAATAAGGGGCGTCTG
CACGCGTTTCGCAAGGAGCACCCGCTGCCG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig6986:819..8048-

>mRNA_L-elsbetiae_contig6986.15769.1 ID=mRNA_L-elsbetiae_contig6986.15769.1|Name=mRNA_L-elsbetiae_contig6986.15769.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1704bp|location=Sequence derived from alignment at L-elsbetiae_contig6986:819..8048- (Laminarionema elsbetiae ELsaHSoW15)
TGTGACGTGGCGAATGGGGGAGGAGAGGCGGCGGCGGCGGCGGGGCGGCC
AAGCGGAGGCGTGGAGAGCCAGCAGCAGGGGCAGGAGCGCGAGGAGCGGG
GGGCAGAGGAACCCAGCATGCAGTTTGCGAGCTACGACGGGAATCACCGG
ACGGTGGAGCTCCTGCGGGAGTCGGTGTACCTGACCGACATGGACCTGAC
GAGTGTGACGTGGCGAATGGGGGAGGAGAGGCGGCGGCGGCGGCGGGGCG
GCCAAGCGGAGGCGTGGAGAGCCAGCAGCAGGGGCAGGAGCGCGAGGAGC
GGGGGGCAGAGGAACCCAGCATGCAGTTTGCGAGCTACGACGGGAATCAC
CGGACGGTGGAGCTCCTGCGGGAGTCGGTGTACCTGACCGACATGGACCT
GACGAGGTATCTCCCCGAGTGCGCCGACAACCTCAGCCGCGAGTTCAAGA
TGGACATCTTGCCGGCCGGGGCCCGGTGCGCCATGCAGCACATGCCTCGC
GAGAGCAGACCCTTCCTCGGCCCCAACCTTTACGTCACCCCTCCGGGGAG
GTATCTCCCCGAGTGCGCCGACAACCTCAGCCGCGAGTTCAAGATGGACA
TCTTGCCGGCCGGGGCCCGGTGCGCCATGCAGCACATGCCTCGCGAGAGC
AGACCCTTCCTCGGCCCCAACCTTTACGTCACCCCTCCGGGGAGCTGGAC
CCGGTTCCACCAAGACGGCAACGGGACTGTCGACTCCGGGCACCAGTGTC
TGGCGGGCCGGAACCGCGTGATCATGCTCCGCCGCCTCCGCGACGAGAAG
GACAAGCACACCGCGCTCCGAATACTGTCGGGGGCGGGGGAAGGAGGAGG
AAGCGCGGGGCCCCCGGCGGGAAGCGGCAAGCTGGACCCGGTTCCACCAA
GACGGCAACGGGACTGTCGACTCCGGGCACCAGTGTCTGGCGGGCCGGAA
CCGCGTGATCATGCTCCGCCGCCTCCGCGACGAGAAGGACAAGCACACCG
CGCTCCGAATACTGTCGGGGGCGGGGGAAGGAGGAGGAAGCGCGGGGCCC
CCGGCGGGAAGCGGCAAGGGGGGCGCCGCCATCTCGCCGCACGACACACG
CCTGCTGGGGGGCTCGAAGGAGCGGAACGGGGGGGGCGTTGCGCGCGAGG
GGGGGGCGGGGGGGATGGAGGCGGAGGCGGGGGCGGAGGCGGAGGGAGAT
GACGACAGTCCGCTGTACAAGCCCCCCCATTCCGACGGGGAGAAGCCGCC
GTGGCCTTCTGATGAGGCGGTGGAGAGGCTCCGCGAGGGGGGCGCCGCCA
TCTCGCCGCACGACACACGCCTGCTGGGGGGCTCGAAGGAGCGGAACGGG
GGGGGCGTTGCGCGCGAGGGGGGGGCGGGGGGGATGGAGGCGGAGGCGGG
GGCGGAGGCGGAGGGAGATGACGACAGTCCGCTGTACAAGCCCCCCCATT
CCGACGGGGAGAAGCCGCCGTGGCCTTCTGATGAGGCGGTGGAGAGGCTC
CGCGAGCTGAACTTTTGCCCCAGCGTGTTCACCCTGGAGCCCGGGGAGTT
CGTGCACATCAATAAGGGGCGTCTGCACGCGTTTCGCAAGGAGCACCCGC
TGCCGCTGAACTTTTGCCCCAGCGTGTTCACCCTGGAGCCCGGGGAGTTC
GTGCACATCAATAAGGGGCGTCTGCACGCGTTTCGCAAGGAGCACCCGCT
GCCG
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