|
Homology
BLAST of mRNA_L-elsbetiae_contig6980.15761.1 vs. uniprot
Match: D7FZC1_ECTSI (Cytochrome P450 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FZC1_ECTSI) HSP 1 Score: 441 bits (1133), Expect = 6.340e-148 Identity = 227/303 (74.92%), Postives = 248/303 (81.85%), Query Frame = 1
Query: 124 MDLIAQEHSVVSWTVMTLVAVLAAVIGKTGVGVLRAYYILRVRAGLPVVLWFPKFWRMDGRRQTGSSLSRVLKRMELLEGSHGMYGTVFGTQAVLHVADPEAAALVLSQHTKRPGYDHFGGFFGRGVFTADGEEWRRKRATVAHALFRGRSSAPAARPPASA--VHGNXXXXXXXXXXXXXXXLAVLANEEADLLLREVEALRKGDGELEVEIVRLLQRHTLNLIHRFLCGGEDVCASPEKKRLLPRYLDAVTDMRMVILARSRSVWMFAWGWAYRAFSPFYVREARNMGPIREFAELVLETA 1026
M L E + SWT++ LVA+ AA +GK G+G+LRAYYILRVRAGLPVVLW+PKFWRMDGRRQ GSSLSRVLKRME+LEG HGMYGTVFGTQAV+HVADPEAA LVLSQHTKRPGYDHFG FFGRGVFTADGEEWR+KRATVAHALFRG + + A V LAVLANEEAD LLREVEALR+ GELEVE+VRLLQ HTLNL+HRFLCGGE+VCASPE+K LL RYLDAVTDMRMVILARSRSVWMFAWGW YRAFSPF+ RE +NM PIREFAELV+ETA
Sbjct: 1 MGLPDLEFPLASWTLVALVALSAATLGKVGLGMLRAYYILRVRAGLPVVLWYPKFWRMDGRRQKGSSLSRVLKRMEVLEGPHGMYGTVFGTQAVVHVADPEAATLVLSQHTKRPGYDHFGSFFGRGVFTADGEEWRKKRATVAHALFRGGAVTASGGGVADTRGVVSGEVGGGRGAAVGSGKALAVLANEEADSLLREVEALREKGGELEVEVVRLLQCHTLNLVHRFLCGGENVCASPERKHLLSRYLDAVTDMRMVILARSRSVWMFAWGWVYRAFSPFHARETKNMLPIREFAELVIETA 303
BLAST of mRNA_L-elsbetiae_contig6980.15761.1 vs. uniprot
Match: A0A835YLF9_9STRA (Cytochrome P450 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLF9_9STRA) HSP 1 Score: 250 bits (638), Expect = 2.160e-74 Identity = 146/297 (49.16%), Postives = 166/297 (55.89%), Query Frame = 1
Query: 220 VLRAYYILRVRAGLPVVLWFPKFWRMDGRRQTGSSLSRVLKRMELLEGSHGMYGTVFGTQAVLHVADPEAAALVLSQHTKRPGYDHFGGFFGRGVFTADGEEWRRKRATVAHALFRGRSSAPAARPPASAVHGNXXXXXXXXXXXXXXXLAVLANEEADLLLREVEALRKGDGE----------------------------LEVEIVRLLQRHTLNLIHRFLCGGEDVCASPEKKRLLPRYLDAVTDMRMVILARSRSVWMFAWGWAYRAFSPFYVREARNMGPIREFAELVLETA 1026
VLRAYYILR RAG+P V W+PKFWR+D RQ G SL RVL RM L G H MYGTVFG QAVLHV DPEAAALVLSQ +K P YDHF GF GRGVFTADG EWR KR +V HALF+G L L NE AD L ++ G EVE+V +LQ+HTL +IH FL G + E+ L PRYL AV ++RMVILAR+RS+WM A WAYR FS Y REA MGPIR F+ + L A
Sbjct: 35 VLRAYYILRFRAGVPTVFWWPKFWRIDENRQKGGSLRRVLPRMRALGGKHDMYGTVFGGQAVLHVVDPEAAALVLSQSSKAPAYDHFRGFCGRGVFTADGPEWRAKRQSVNHALFKG---------------------------ARLDRLDALVNEHADALCAQLSRAAGCSGTGAQXXXXXXXXXXXXXXXXXXXXXXXXXAEVEMVGVLQQHTLAIIHAFLTGSS-YTENKEQAALTPRYLAAVVEIRMVILARARSLWMLASSWAYRLFSDLYKREAAAMGPIRAFSRMALAAA 303
BLAST of mRNA_L-elsbetiae_contig6980.15761.1 vs. uniprot
Match: A0A7S2V7N4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V7N4_9STRA) HSP 1 Score: 130 bits (327), Expect = 5.770e-34 Identity = 63/114 (55.26%), Postives = 77/114 (67.54%), Query Frame = 1
Query: 226 RAYYILRVRAGLPVVLWFPKFWRMDGRRQTGSSLSRVLKRMELLEGSHGMYGTVFGTQAVLHVADPEAAALVLSQHTKRPGYDHFGGFFGRGVFTADGEEWRRKRATVAHALFR 567
RAY +L G+P+V W+PKF D RQ G+SL +VL M+ L G + MYGTV+GTQAVLHV PE A VL K P Y+HF GF G GVFTAD EW+ KRA+V H++FR
Sbjct: 1 RAYEMLTKIGGVPIVFWYPKFISHDSSRQKGASLKKVLCSMQKLGGKYDMYGTVYGTQAVLHVGHPEVAKCVLQGGHKAPAYNHFKGFCGSGVFTADSREWKEKRASVVHSMFR 114
BLAST of mRNA_L-elsbetiae_contig6980.15761.1 vs. uniprot
Match: A0A1Z5JE35_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JE35_FISSO) HSP 1 Score: 118 bits (296), Expect = 2.580e-26 Identity = 87/237 (36.71%), Postives = 121/237 (51.05%), Query Frame = 1
Query: 346 MELLEGSHGMYGTVFG-TQAVLHVADPEAAALVLSQH---------------TKRPGYDHFGGFFGRGVFTADGEEWRRKRATVAHALFRGRSSAPAARPPASAVHGNXXXXXXXXXXXXXXXLAVLANEEADLLLREVEALRKGDGELEVEIVRLLQRHTLNLIHRFLCGGEDVCASPEKK-RLLPRYLDAVTDMRMVILARSRSVWMFAWGWAYRAFSPFYVREARNMGPIREFA 1005
M+ L+G + MYGTV+G + AV+HVA P AA +LS K P Y+HF F G+GVFTADG++W+ KRA V HALFR S GN L N A L V+ L++ E IV +LQ T++LI+R++ E P+K+ L+ YL++V +R++ILA+SRS+W W YR S + +E M PIR+FA
Sbjct: 1 MKALQGPYDMYGTVYGLSTAVVHVAHPTAALAILSPAKQPKTSSPWLESTGIVKAPAYNHFQNFCGQGVFTADGQDWKNKRAAVIHALFRTTS-------------GNWETH-----------LEQQVNRAAQKL---VQTLQQTQPEPR-NIVPILQTSTISLIYRYITHTE----LPQKQSNLVSSYLESVIRIRLIILAQSRSLWFLLPRWIYRTCSALFRQEEETMIPIRDFA 205
BLAST of mRNA_L-elsbetiae_contig6980.15761.1 vs. uniprot
Match: K0RG15_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RG15_THAOC) HSP 1 Score: 101 bits (251), Expect = 7.330e-20 Identity = 81/257 (31.52%), Postives = 101/257 (39.30%), Query Frame = 1
Query: 427 AAALVLSQHTKRPGYDHFGGFFGRGVFTADGEEWRRKRATVAHALFRGRSSAPAARPPASAVHGNXXXXXXXXXXXXXXXLAVLANEEADLLLREVEALRKGDGELE-----------VEIVRLLQRHTLNLIHRFLCGGE--------------DVCASPEK---------------------------------------KRLLPRYLDAVTDMRMVILARSRSVWMFAWGWAYRAFSPFYVREARNMGPIREFA 1005
+AA L+ TK P YDHF F G GVFTADG +W+ KRA+V H L R + L AN AD REV+A LE +++V +LQR T+ LI+R + E D AS + K LLP YLD+VT +RM+ILA+SRS W W YR SP Y E + M PIR FA
Sbjct: 216 SAARFLTGSTKSPAYDHFKNFSGDGVFTADGADWKAKRASVLHCLIRNSN--------------------------IEETLEAQANRSADCFEREVKAATLLGQNLEKAKSGRPSLRVIDVVPMLQRSTVGLIYRLITHHEIDFSPNLCESMTRLDTYASSRRGDPPSPRSSATSLERLVNSETSESGRCCQVSPTENDLDVKSLLPTYLDSVTKIRMIILAQSRSFWYLVPRWMYRLLSPMYREEEKTMKPIRNFA 446
BLAST of mRNA_L-elsbetiae_contig6980.15761.1 vs. uniprot
Match: A0A7S1ZMQ3_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZMQ3_TRICV) HSP 1 Score: 87.4 bits (215), Expect = 3.070e-15 Identity = 67/221 (30.32%), Postives = 95/221 (42.99%), Query Frame = 1
Query: 454 TKRPGYDHFGGFFGRGVFTADGEEWRRKRATVAHALFRG-------------RSSAPAARPPASAVHGNXXXXXXXXXXXXXXXLAVLANEEADLLLR-----EVEALRKGD--GELEVEIVRLLQRHTLNLIHRFLCGGEDVC----------ASPEKKRLLPRYLDAVTDMRMVILARSRSVWMFAWGWAYRAFSPFYVREARNMGPIREFAELVLETA 1026
+K P Y+HF F G GVFTADG++W+ KR ++ H L +G R + AA + + +L L+ R V+ + D G E + R Q L + + C AS LL YL++VT +RM+ILA+SRS+W W YRAFS Y +E MGPIR+FA + + A
Sbjct: 110 SKAPAYNHFKDFSGDGVFTADGDDWKAKRNSLMHCLLKGCTSDKSKGIKRLEREANRAADSFIEQIEHAGTNKTGKGRSGKVNVVPMLQRATIGLIYRFITHHNVDIFKCDDEKGTSERDYDRKSQEGDLPYLTSWRSSESSTCSECPNDHEIPASRPPSALLSSYLESVTQIRMIILAQSRSLWFLTPRWFYRAFSAMYCQEDSTMGPIRDFARMTCQNA 330
BLAST of mRNA_L-elsbetiae_contig6980.15761.1 vs. uniprot
Match: B8BWN1_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BWN1_THAPS) HSP 1 Score: 78.2 bits (191), Expect = 2.340e-12 Identity = 39/70 (55.71%), Postives = 46/70 (65.71%), Query Frame = 1
Query: 817 DVCASPEKKRLLPRYLDAVTDMRMVILARSRSVWMFAWGWAYRAFSPFYVREARNMGPIREFAELVLETA 1026
DV + K LLP YLDAVT +RM++LA+SRS+W WAYR FSP Y E R M PIR+FA L E A
Sbjct: 82 DVKKDSQMKLLLPIYLDAVTKIRMIVLAQSRSIWYLLPRWAYRTFSPMYRDEERTMVPIRQFARLACENA 151
BLAST of mRNA_L-elsbetiae_contig6980.15761.1 vs. uniprot
Match: A0A7S0KHQ4_MICPS (Hypothetical protein n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0KHQ4_MICPS) HSP 1 Score: 73.6 bits (179), Expect = 1.190e-10 Identity = 88/303 (29.04%), Postives = 114/303 (37.62%), Query Frame = 1
Query: 250 RAGLPVVLWFPKFWRMDGRRQTGSSLSRVLKRMELLEGSHGM--------YGTVFGTQAVLHVADPEAAALVLS-QHTKRPGYDHFGGFFGRGVFTADGEEWRRKRATVAHALFRGRSSAPAARPPASAVHGNXXXXXXXXXXXXXXXLAVLANEEADLLLREVEALRKGDGE----------LEVEIVRLLQRHTLNLIHRFLCG---------------GEDVCAS------PEKKRLL----PRYLDAVTDMRMVILARSRSVWMFAWGWAYRAFSPFYVREARNMGPIREFAELVLETA 1026
R LP V W P + L RV +RM + + TV G H+ A L Q K P Y F F G G+FTA+G++W KR+ V A F P A A G LA A E+ V+ KG+G LEV+++ LQR TL +L G G+ V A+ P ++R YL A TD+R +I AR+RSVWM + WAY A SP E + R EL L A
Sbjct: 81 RGKLPSVPWRPNLMFNVYATPRRNLLDRVSRRMAAANDGNDATTKHRRRAFATVVGNCPFAHLGGAALARAALDRQPVKSPLYRAFEAFAGVGIFTAEGDDWAAKRSEVLGA-FASAGLEPLAAASTRAAAG--------LTAEIDAQLAAAAGEKETRRRSTVDDAEKGEGGGGKGRAAGRGLEVDMLPRLQRATLRATFEYLAGVDLPTAAAADGDGELGDGVDAAVVGDARPRRRRPAGVWEDEYLAAATDLRRLIPARARSVWMLS-DWAY-ALSPVGRLERARIREARRLPELALRAA 372
BLAST of mRNA_L-elsbetiae_contig6980.15761.1 vs. uniprot
Match: A0A7S0BXU8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0BXU8_9STRA) HSP 1 Score: 69.7 bits (169), Expect = 1.510e-9 Identity = 42/116 (36.21%), Postives = 56/116 (48.28%), Query Frame = 1
Query: 748 VEIVRLLQRHTLNLIHRFLCGGEDVCASPEK-----------------------KRLLPRYLDAVTDMRMVILARSRSVWMFAWGWAYRAFSPFYVREARNMGPIREFAELVLETA 1026
V IV LLQR T+ +I+R+L +P + LL YLDAVT +RM+ILA++RS+W W YR FS Y E + PIR F+EL +A
Sbjct: 41 VNIVPLLQRSTVGIIYRYLTHSTTATTNPANATQSESAAANSAQTPHNHPCHTYQTLLMPYLDAVTQIRMIILAQARSIWFLLPQWCYRRFSKLYQTEEALLKPIRAFSELACRSA 156
BLAST of mRNA_L-elsbetiae_contig6980.15761.1 vs. uniprot
Match: C1DYE6_MICCC (Uncharacterized protein n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1DYE6_MICCC) HSP 1 Score: 69.3 bits (168), Expect = 2.880e-9 Identity = 81/299 (27.09%), Postives = 110/299 (36.79%), Query Frame = 1
Query: 250 RAGLPVVLWFPKFWRMDGRRQTGSSLSRVLKRMELLEGS----------HGMYGTVFGTQAVLHVADPEAAALVLS-QHTKRPGYDHFGGFFGRGVFTADGEEWRRKRATVAHALFRGRSSAPAARPPASAVHGNXXXXXXXXXXXXXXXLAVLANEEADLLLREVEALRKGDG-------------ELEVEIVRLLQRHTLNLIHRFLCGGE--------------DVCASPEKKRLL--PRYLDAVTDMRMVILARSRSVWMFAWGWAYRAFSPFYVREARNMGPIREFAELVLETA 1026
R +P V W P + L R+ +RM H + TV G HV A L Q K P Y F F G G+FTA+G++W KR+ V A F P A A G LA A + + ++ KG+G +E++++ LQR TL +L G + D P + + YL A TD+R +I AR+RSVWM + WAY A SP E + R EL L A
Sbjct: 54 RGKIPSVPWRPNLMFNVYATPRRNLLDRISRRMAAARDGNDATTKHRHRHRAFATVVGNCPFAHVGGAALARAALDRQPVKSPLYRAFEAFAGVGIFTAEGDDWAAKRSEVLGA-FATAGLEPLAAASMRAAAG--------LTAEIDAQLAAAARGKGETRRSPLDDAEKGEGGEGRGGVGLEVDTAVEMDMLPRLQRATLRATFEYLAGVDLPTAAAAEAGDALHDATDQPARPAGVWEDEYLAAATDLRALIPARARSVWMLS-DWAY-ALSPLGRLERTRIREARRLPELALRAA 341
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Taxonomic scope | Eukaryota |
Seed ortholog score | 446.8 |
Seed ortholog evalue | 9e-123 |
Seed eggNOG ortholog | 2880.D7FZC1 |
Preferred name | CYP19A1 |
KEGG rclass | RC00257,RC00893,RC02649 |
KEGG ko | ko:K07427,ko:K07428,ko:K07434,ko:K12795,ko:K15001,ko:K15386,ko:K21294,ko:K21476 |
KEGG Reaction | R01840,R02351,R02501,R03087,R04759,R04761 |
KEGG Pathway | ko00140,ko01100,ko04621,ko04626,ko04726,ko04913,map00140,map01100,map04621,map04626,map04726,map04913 |
KEGG Module | M00110 |
Hectar predicted targeting category | signal anchor |
GOs | GO:0000003,GO:0001101,GO:0001501,GO:0001553,GO:0001655,GO:0001678,GO:0002376,GO:0002520,GO:0002521,GO:0002573,GO:0002676,GO:0002677,GO:0002682,GO:0002683,GO:0002685,GO:0002686,GO:0002688,GO:0002689,GO:0003006,GO:0003674,GO:0003824,GO:0004497,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0005829,GO:0006082,GO:0006091,GO:0006629,GO:0006694,GO:0006703,GO:0006706,GO:0006710,GO:0006725,GO:0006805,GO:0006807,GO:0006950,GO:0007154,GO:0007165,GO:0007275,GO:0007399,GO:0007417,GO:0007420,GO:0007530,GO:0007548,GO:0008021,GO:0008144,GO:0008150,GO:0008152,GO:0008202,GO:0008206,GO:0008207,GO:0008209,GO:0008210,GO:0008395,GO:0008406,GO:0008584,GO:0008585,GO:0008610,GO:0009055,GO:0009056,GO:0009058,GO:0009314,GO:0009410,GO:0009415,GO:0009628,GO:0009635,GO:0009636,GO:0009719,GO:0009725,GO:0009743,GO:0009746,GO:0009749,GO:0009987,GO:0010033,GO:0010035,GO:0010038,GO:0010164,GO:0010212,GO:0010243,GO:0010646,GO:0010647,GO:0010758,GO:0010760,GO:0010817,GO:0012505,GO:0014070,GO:0014072,GO:0016020,GO:0016042,GO:0016125,GO:0016491,GO:0016705,GO:0016712,GO:0016999,GO:0017144,GO:0018879,GO:0018894,GO:0018963,GO:0019722,GO:0019725,GO:0019748,GO:0019752,GO:0019825,GO:0019932,GO:0020037,GO:0021536,GO:0021537,GO:0021543,GO:0021761,GO:0021766,GO:0021854,GO:0022414,GO:0022602,GO:0022900,GO:0023051,GO:0023052,GO:0023056,GO:0030097,GO:0030099,GO:0030133,GO:0030154,GO:0030186,GO:0030237,GO:0030325,GO:0030334,GO:0030336,GO:0030424,GO:0030425,GO:0030540,GO:0030850,GO:0030851,GO:0030879,GO:0030900,GO:0031347,GO:0031348,GO:0031410,GO:0031982,GO:0031984,GO:0032101,GO:0032102,GO:0032354,GO:0032355,GO:0032368,GO:0032370,GO:0032501,GO:0032502,GO:0032504,GO:0032787,GO:0032870,GO:0032879,GO:0033267,GO:0033500,GO:0033554,GO:0033574,GO:0033993,GO:0034103,GO:0034104,GO:0034284,GO:0034641,GO:0034698,GO:0034754,GO:0035265,GO:0035270,GO:0035556,GO:0036094,GO:0036477,GO:0040007,GO:0040012,GO:0040013,GO:0042175,GO:0042180,GO:0042181,GO:0042221,GO:0042430,GO:0042445,GO:0042446,GO:0042447,GO:0042493,GO:0042537,GO:0042592,GO:0042593,GO:0042698,GO:0042995,GO:0043005,GO:0043025,GO:0043195,GO:0043197,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043278,GO:0043279,GO:0043436,GO:0043603,GO:0043627,GO:0043648,GO:0043679,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044297,GO:0044306,GO:0044309,GO:0044344,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044456,GO:0044463,GO:0044464,GO:0044550,GO:0045124,GO:0045137,GO:0045202,GO:0045779,GO:0046483,GO:0046545,GO:0046546,GO:0046660,GO:0046661,GO:0046850,GO:0046851,GO:0046883,GO:0046887,GO:0046906,GO:0048037,GO:0048511,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048534,GO:0048583,GO:0048585,GO:0048589,GO:0048608,GO:0048609,GO:0048731,GO:0048732,GO:0048806,GO:0048856,GO:0048869,GO:0048878,GO:0050727,GO:0050728,GO:0050789,GO:0050794,GO:0050803,GO:0050896,GO:0050920,GO:0050922,GO:0051046,GO:0051047,GO:0051049,GO:0051050,GO:0051239,GO:0051241,GO:0051270,GO:0051271,GO:0051599,GO:0051716,GO:0055082,GO:0055114,GO:0060065,GO:0060322,GO:0060348,GO:0060359,GO:0060736,GO:0061370,GO:0061458,GO:0065007,GO:0065008,GO:0070330,GO:0070382,GO:0070848,GO:0070887,GO:0071214,GO:0071229,GO:0071310,GO:0071322,GO:0071326,GO:0071331,GO:0071333,GO:0071363,GO:0071371,GO:0071372,GO:0071462,GO:0071464,GO:0071466,GO:0071495,GO:0071704,GO:0071774,GO:0072347,GO:0080134,GO:0097159,GO:0097447,GO:0097458,GO:0097708,GO:0097720,GO:0098793,GO:0098794,GO:0098827,GO:0099503,GO:0104004,GO:0120025,GO:0120038,GO:0150034,GO:1900558,GO:1900560,GO:1900561,GO:1900563,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901564,GO:1901575,GO:1901576,GO:1901615,GO:1901617,GO:1901654,GO:1901698,GO:1901700,GO:1901701,GO:1903530,GO:1903532,GO:1905521,GO:1905522,GO:1905952,GO:1905954,GO:2000145,GO:2000146,GO:2000864,GO:2000866 |
EggNOG free text desc. | cytochrome p450 |
EggNOG OGs | COG2124@1,KOG0157@2759 |
EC | 1.14.14.1,1.14.14.14 |
COG Functional cat. | Q |
Best tax level | Eukaryota |
Best eggNOG OG | NA|NA|NA |
BRITE | ko00000,ko00001,ko00002,ko00199,ko01000,ko01008 |
Ec32 ortholog description | cytochrome P450 |
Ec32 ortholog | Ec-07_001680.1 |
Exons | 6 |
Model size | 1028 |
Cds size | 1026 |
Stop | 0 |
Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622816773.8276927-CDS-L-elsbetiae_contig6980:2920..3038 | 1622816773.8276927-CDS-L-elsbetiae_contig6980:2920..3038 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig6980 2921..3038 - |
1691683802.7090185-CDS-L-elsbetiae_contig6980:2920..3038 | 1691683802.7090185-CDS-L-elsbetiae_contig6980:2920..3038 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig6980 2921..3038 - |
1622816773.8399117-CDS-L-elsbetiae_contig6980:3541..3708 | 1622816773.8399117-CDS-L-elsbetiae_contig6980:3541..3708 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig6980 3542..3708 - |
1691683802.723236-CDS-L-elsbetiae_contig6980:3541..3708 | 1691683802.723236-CDS-L-elsbetiae_contig6980:3541..3708 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig6980 3542..3708 - |
1622816773.852086-CDS-L-elsbetiae_contig6980:4517..4808 | 1622816773.852086-CDS-L-elsbetiae_contig6980:4517..4808 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig6980 4518..4808 - |
1691683802.7327201-CDS-L-elsbetiae_contig6980:4517..4808 | 1691683802.7327201-CDS-L-elsbetiae_contig6980:4517..4808 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig6980 4518..4808 - |
1622816773.8626404-CDS-L-elsbetiae_contig6980:5393..5452 | 1622816773.8626404-CDS-L-elsbetiae_contig6980:5393..5452 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig6980 5394..5452 - |
1691683802.746618-CDS-L-elsbetiae_contig6980:5393..5452 | 1691683802.746618-CDS-L-elsbetiae_contig6980:5393..5452 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig6980 5394..5452 - |
1622816773.8740373-CDS-L-elsbetiae_contig6980:6689..6824 | 1622816773.8740373-CDS-L-elsbetiae_contig6980:6689..6824 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig6980 6690..6824 - |
1691683802.7559454-CDS-L-elsbetiae_contig6980:6689..6824 | 1691683802.7559454-CDS-L-elsbetiae_contig6980:6689..6824 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig6980 6690..6824 - |
1622816773.88545-CDS-L-elsbetiae_contig6980:8029..8285 | 1622816773.88545-CDS-L-elsbetiae_contig6980:8029..8285 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig6980 8030..8285 - |
1691683802.7648573-CDS-L-elsbetiae_contig6980:8029..8285 | 1691683802.7648573-CDS-L-elsbetiae_contig6980:8029..8285 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig6980 8030..8285 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig6980.15761.1 >prot_L-elsbetiae_contig6980.15761.1 ID=prot_L-elsbetiae_contig6980.15761.1|Name=mRNA_L-elsbetiae_contig6980.15761.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=342bp
MRLGRGKYETGARVVERVRRQGYPSVAKDRPPPVLRCYIWRMDLIAQEHS VVSWTVMTLVAVLAAVIGKTGVGVLRAYYILRVRAGLPVVLWFPKFWRMD GRRQTGSSLSRVLKRMELLEGSHGMYGTVFGTQAVLHVADPEAAALVLSQ HTKRPGYDHFGGFFGRGVFTADGEEWRRKRATVAHALFRGRSSAPAARPP ASAVHGNGNGGGSGGNGGRGKGLAVLANEEADLLLREVEALRKGDGELEV EIVRLLQRHTLNLIHRFLCGGEDVCASPEKKRLLPRYLDAVTDMRMVILA RSRSVWMFAWGWAYRAFSPFYVREARNMGPIREFAELVLETA back to topmRNA from alignment at L-elsbetiae_contig6980:2921..8285- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_L-elsbetiae_contig6980.15761.1 ID=mRNA_L-elsbetiae_contig6980.15761.1|Name=mRNA_L-elsbetiae_contig6980.15761.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5365bp|location=Sequence derived from alignment at L-elsbetiae_contig6980:2921..8285- (Laminarionema elsbetiae ELsaHSoW15) ATGCGACTGGGCAGGGGCAAATACGAAACAGGGGCTCGCGTCGTAGAGCG
TGTTCGTCGTCAAGGCTACCCTTCTGTGGCGAAAGATCGTCCACCTCCTG
TTTTACGCTGCTACATTTGGAGGATGGATCTCATTGCTCAGGAGCACTCT
GTTGTATCGTGGACGGTAATGACGCTTGTCGCGGTCTTGGCTGCCGTGAT
CGGCAAGACCGGCGTAGGTGTGCTCCGAGCTTATTACATCCTGCGTGTGC
GAGCTGGTGAGTAGGAACGAAATAGCGTTGGTGCCAACAGGTCTTTGGTT
GAAGCTTGGTCCGCTCGGCTACTACGCAGTTGCTTTTCTGCCGCGTCGTT
GCGAATTCACAGCCTCTGTTCGTGACACATGTTTCGTTTCCTGCGCGCTG
CCGTGTTTACGGATCCACGGATCTCGATCTCTGTCCCATGCCTGGCGCTG
ATTTCGGTGCAAGTGCGATTTGTTTCCATTTCTCTCTCCCCCCCCCCCCC
CCCCCCCCCCCCCCCCTTTTTCCTCTTTTTTCCCCCCCCTCCTCGCTGTC
TCTTCCTTCCTCTCTCTCCTTGTGTTCTTCCCCNNNNNNNNNNCCCGGCT
CTCCATCTCTCCCCCGCCCCGGGCGGTTTTTGCGGTGCCAGGGCTTTTTT
TTCCCTTTTCCCCCCCCCCCCCCCCCCTCTCTCTCTCTCGTTCTCTCTCT
TGCGCCCTCCCCTCGGCGTGTGTCTCTACTCTGTCTGCCTGCTGGTTTTG
CCACCACGGGCGTGAGTTTCCCCGCTCTCCGCCTCCGCCTCCGCCGCTCC
GCCGCTCCTCTTAAGGAACCGGGTCTACGGATAATGCCTGTGTGGATGTG
CAGTGCTCCATTTTGTCAAAGCCTCTCTATATGTGTTTGCTTGGTTTTAG
TCTCGTACTGCCTGGCCCCGAAGAGGTTTAGAGCCTGTTTGTCTCCACCG
CATACAGAGAGCGCAAGATCAAGGGAAAAACGGCTGCTGTGGAACCAACA
GCAGCAGTAGTAGCAGTGTCTACGCAGGGTGTTCGTCTTCAGCGAACATA
TGACATTACAAAGTATGGAACTGCCCTCTCCAGATGGTGCACTAACTGCT
GGTTCGCCTACAATAACAGAGGCCGGCAGTGCGGGAGAGGCGCGGGGCTA
CCTAAACCCTTGGAGATTCCTCTCAGAAGGAGACTCTTGGTGCCGGCCAC
TTTCCATCGCGTGCGCGTGCTGGTCGCCACGCTTACAGGCCCCTTTTTCT
CAGCCAGCCGGCCGCCCGTATTGCAGTGCGTGACCTTGCCTCTTCAGGTT
CCCGTTTCCCGCTGCCCCATTCCGACCCGATCCCGCATCCGATTCGATCC
GATCCGATCCGATCCGATCCGATCCGATCCGATCCGATTCGATTCGATCC
CGCTGTCCCGAAAAATGCGAAACGCCAATGATGTATCTATGTGTGTACCT
CAATAAAACAGGCCTCCCGGTGGTGCTGTGGTTCCCCAAGTTTTGGCGCA
TGGACGGGCGGCGCCAGACAGGTTCGAGCCTGTCGCGGGTGCTCAAGCGT
ATGGAGCTCCTCGAGGGATCTCACGGCATGTACGGCACGGTTTTCGGTGA
GGGGGGGGGGGTCGCCGCACGCGCTAAATTGCAGAGATACCACAGCGGTC
AGAGGAGCGGAGGGAGATGTACGGAGGGCGCCCGTCGGTGAAGGAGAGGA
AGGAGGAGGGGGGGGGGGGGCCCGGGGGCGGGGGGTGGTGATCGCCGAGT
TGCCCGGCGAGAGGCGGTTTGCTGTCTACCCCCACACACNNNNNNNNNNG
GGGGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
GGGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGTCCGTGAGTGAAGTGT
TGTTATCGGCGAGTTGCACGGGCAGAGGCGGTTTGCTGTCTGCACACACA
CACCAGGCGGCTCCTGCGTGCACCGCCGAGACTATTAATAGTGCGATTCC
TCGAGAGAGGGAGAGAGGGCTTGGCCTCGTGAGCCAGCCGCGACGCGAGG
CCGCAACGCGCGCAGACGGAGGACAGACACGGATGATGCGCTGCCAACAA
ACCCCGTCGACCCCTCTTCCGGCCGCGGCAAATGCTCGGTCGGGTTTGTG
GCTTGTTTGTGCCGCCAGCGAGAGCAAATAGGGTTGGGCGCGAGACTCAA
GAATGCGCCATCATACGCATGGTAGATATGTAGTAGCCCAAAAACCTCCT
TTCGTATTTACCTCACACGCATAAATAGAGATGCGCCTGGCACTCATATG
TTGCGCATTCGTCGGCAAGGGTGGCATATGACGTACATATTGTACGTACC
CTCTCATACATTAGAGGGTTCGGTACGCGTCATTGAGTCCGGTGTTCGGG
CGAGTTGTTTCACCAGGAAGGTTGTCTCTGCTGTGTGTGTCATTTTAGCT
TGCGATGCGGCTTCGTCCTTTGTCGGCCGACGGCAAAGGCAGAAGAGGTG
AGAGGGAGGACGGGGGGGGGGAGGGGGGTGGTCACCTCCCGAAGTTTACG
GTTCCGCACGGCTACGGCATGCGTGATCAATGTAGACACGCTTACGTCGC
GGCCTTTGGCTGGCAGCAGCGAGCAACCCGCACCCGCTCTTTTCGAGGAA
AACGATCAAGGGTTGGGGGGAAAGAAAGGCCCGGCAGCAGCTGCCGTCTC
CTGTAGGTCCGATGAGGAGCCATTTCTTGCTCGCCCTTAACGCCCCACCC
ACGTGTTTGCGCCCTCTTTGGCGTTGCTCCTCTGTGTTTTTATTTTTTGT
CCACGATCGGGGCGGGGCGGGGTGGGGGTGCAGGCACTCAGGCCGTGCTG
CACGTGGCCGACCCGGAGGCGGCCGCGCTGGTTCTTTCCCAGGCAAGTTG
CGAGCTTTGTCACTCGCGATGAACGTGCTTCGCACACAGCAGCTATTTAG
AATGGCCACCCACCTTAAACGGTAGCGCAAGCCACAATCGACACCCTATG
TACACACGGAACATTTGCAGTCGCGTAACATGGCACCCTAGGGCACCTTC
TAGGAAAAGGAACGGTGCTCGGAACGGTCCTCGGAACGGTGCTCGGAACG
TCCTCCGTCGCGGTTAAGAGGCGCTCGTTACGCAAGTGGTCGCCCCAAGC
AAGTTGGACGGCACACGTGAGTTTCCTCTCTCCCAACCCCACACCCCGTG
TACCACAAGCTCAAGGCAAAGCGTCGAGCGCCGTCATCCTCTTGGGTGCA
AACTCGGGAAAAATCTAGCCCCCCCCCGCCGCCGCCGCCGCCGCCATCTT
TTTATCCGTAATTTTCCGCAATTTACAATCAACGCCGACAACGCCCCCCT
ACAAACACACACATCGGAATCAGATAAGACAGCCACCTTCCCTGCCCTCG
CGGCGACCTCATTTTATTTTATTTCTCCCTCCCATCTCCGCCTTCTCCTC
TGCCACCGCCGCCGCCGCCTCGTGCAGCACACCAAGCGGCCGGGGTACGA
CCACTTCGGGGGTTTCTTCGGAAGAGGCGTGTTCACGGCCGACGGGGAGG
AGTGGCGAAGAAAGCGGGCGACGGTGGCGCACGCCTTGTTCCGGGGCAGA
AGCTCCGCCCCGGCTGCCCGCCCCCCCGCCAGCGCCGTCCACGGTAACGG
TAACGGCGGCGGCAGCGGCGGCAATGGCGGCAGGGGGAAAGGCTTGGCGG
TGCTCGCCAACGAGGAGGCGGACTTGCTTTTGAGGGAAGTGGAGGCTTTG
CGGAAGGGGGACGGGGAGGTGAGCGAGTGAGTACGAAAGGGGCGCTGGTG
GTGCCGTCCTTCTTCTGCCACAACGAGATAATCCGTATAAATTAGCACGA
GGTTTGTGGGCGAGCTGCTGCCTATTGCTGTGTGTGTGTGTGTCTGTGTC
TGTGTCTGTGTGTGTCTGTGTCTGTGTGTCTGTGTCTGTGTCTGTGTCTG
TCTATGCATGCGAAGAGGGAGGGAGGGAGGCGTGCTAAGTGGCGGTAGTG
GATGTCCGTTGCGTCGCCCAGGGAGTGGTGAGTGATGGTATGTACATACA
TATTTGTAGTTGTCGTTGCTTCTCTCCCTTCTCTCTCTTGCGTGTGACTG
TACCACATACGTACGTCGCGGCACTTGCATACGCGGGGGGCGTAATGTAC
ACTACTTGCTTGGTAGGTACTACTTGCTTGTTTTTTTTTCTCTCCAAAAA
GAGAGTGAGGTATGTGTGTATCTTTCAAGACTTAAAGAGGTGAGGTATGT
ATGTACCTCTCAAGATTTGGCTGTGTTGGCAGGCACCAAGCGTCACCCTC
ACCATACCCGCCACGCAAAAAATCAAAATGGCCTCGGCGCCCTCCTGCCC
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
CGACGCTTCGGCGTGCCACCCCCCCCCCCGCCCCCCCCCCCCCCCCCCCN
NNNNNNNNNTTTTGGGGGGACTCAACCGGCCCCCCCCCCCTCCCCCCCCC
CCAAAAAACCAATAAAGCCCCCGCCCCCCCCCCCCCCCCCCCCCCCCTCC
CCCCCCCTCCCGTCTGTCCCTCTCCAGCTGGAGGTGGAGATAGTCCGCCT
CCTGCAGCGCCACACCCTCAACCTCATCCACCGCTTCCTCTGCGGCGGGG
AGGATGTCTGTGCCTCCCCCGAAAAGAAACGCCTGCTGCCGCGGTACTTG
GACGCGGTGACGGACATGCGAATGGTCATCCTTGCACGCTCGAGGTATCC
GATAAAACGTCGTGAAATAAAAACAAAGTCAGAAAGGCAGACGTGTATCT
TGTTGTTGCCACGGGGGGGGGGGGGGGTCCCGTGACCGCGACAAAGGAAC
GACCTTCCACGTACATACTTCTTTTTAGTCCTTCTTTGAGAGCGTGCGGT
ACATGTAATCGGGCGGAGTCTGAAGAGAGATGCCGGCCCTGGAGCAAAGC
GTGTCTGGAGGGGGTTGTTTTTGCTGACAACCTGGTGGTGGTCGTGGTGG
TCGTGGTGGTGTCCGTGTCCACAAATAAGGCTTTCCACGCTAGTTTTTCG
TGCAGGCTTGCAAAGAATCGAGTTGTTGCGGCGTCCAGAGGGCCTCCTTC
CATCCCTTCTGCCTTCCCCTCGCCTCCTTCCATCCCTACTGCATTCCCCT
CGCCCCCCAAAGCTGGCTGTCGCCCATCGGCCTTGTTGCCCCCCCCATTA
TCTCTCTCTCTCTCTCTTTTCTCTTGCTTCGTCGGAAAACCCGAAAGGAG
CGTGTGGATGTTTGCTTGGGGCTGGGCGTACCGAGCGTTCTCCCCGTTCT
ACGTCAGGGAGGCCCGCAACATGGGCCCGATCCGCGAGTTCGCGGAGCTG
GTTCTCGAGACCGCC back to topCoding sequence (CDS) from alignment at L-elsbetiae_contig6980:2921..8285- >mRNA_L-elsbetiae_contig6980.15761.1 ID=mRNA_L-elsbetiae_contig6980.15761.1|Name=mRNA_L-elsbetiae_contig6980.15761.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2052bp|location=Sequence derived from alignment at L-elsbetiae_contig6980:2921..8285- (Laminarionema elsbetiae ELsaHSoW15) ATGCGACTGGGCAGGGGCAAATACGAAACAGGGGCTCGCGTCGTAGAGCG TGTTCGTCGTCAAGGCTACCCTTCTGTGGCGAAAGATCGTCCACCTCCTG TTTTACGCTGCTACATTTGGAGGATGGATCTCATTGCTCAGGAGCACTCT GTTGTATCGTGGACGGTAATGACGCTTGTCGCGGTCTTGGCTGCCGTGAT CGGCAAGACCGGCGTAGGTGTGCTCCGAGCTTATTACATCCTGCGTGTGC GAGCTGATGCGACTGGGCAGGGGCAAATACGAAACAGGGGCTCGCGTCGT AGAGCGTGTTCGTCGTCAAGGCTACCCTTCTGTGGCGAAAGATCGTCCAC CTCCTGTTTTACGCTGCTACATTTGGAGGATGGATCTCATTGCTCAGGAG CACTCTGTTGTATCGTGGACGGTAATGACGCTTGTCGCGGTCTTGGCTGC CGTGATCGGCAAGACCGGCGTAGGTGTGCTCCGAGCTTATTACATCCTGC GTGTGCGAGCTGGCCTCCCGGTGGTGCTGTGGTTCCCCAAGTTTTGGCGC ATGGACGGGCGGCGCCAGACAGGTTCGAGCCTGTCGCGGGTGCTCAAGCG TATGGAGCTCCTCGAGGGATCTCACGGCATGTACGGCACGGTTTTCGGCC TCCCGGTGGTGCTGTGGTTCCCCAAGTTTTGGCGCATGGACGGGCGGCGC CAGACAGGTTCGAGCCTGTCGCGGGTGCTCAAGCGTATGGAGCTCCTCGA GGGATCTCACGGCATGTACGGCACGGTTTTCGGCACTCAGGCCGTGCTGC ACGTGGCCGACCCGGAGGCGGCCGCGCTGGTTCTTTCCCAGGCACTCAGG CCGTGCTGCACGTGGCCGACCCGGAGGCGGCCGCGCTGGTTCTTTCCCAG CACACCAAGCGGCCGGGGTACGACCACTTCGGGGGTTTCTTCGGAAGAGG CGTGTTCACGGCCGACGGGGAGGAGTGGCGAAGAAAGCGGGCGACGGTGG CGCACGCCTTGTTCCGGGGCAGAAGCTCCGCCCCGGCTGCCCGCCCCCCC GCCAGCGCCGTCCACGGTAACGGTAACGGCGGCGGCAGCGGCGGCAATGG CGGCAGGGGGAAAGGCTTGGCGGTGCTCGCCAACGAGGAGGCGGACTTGC TTTTGAGGGAAGTGGAGGCTTTGCGGAAGGGGGACGGGGAGCACACCAAG CGGCCGGGGTACGACCACTTCGGGGGTTTCTTCGGAAGAGGCGTGTTCAC GGCCGACGGGGAGGAGTGGCGAAGAAAGCGGGCGACGGTGGCGCACGCCT TGTTCCGGGGCAGAAGCTCCGCCCCGGCTGCCCGCCCCCCCGCCAGCGCC GTCCACGGTAACGGTAACGGCGGCGGCAGCGGCGGCAATGGCGGCAGGGG GAAAGGCTTGGCGGTGCTCGCCAACGAGGAGGCGGACTTGCTTTTGAGGG AAGTGGAGGCTTTGCGGAAGGGGGACGGGGAGCTGGAGGTGGAGATAGTC CGCCTCCTGCAGCGCCACACCCTCAACCTCATCCACCGCTTCCTCTGCGG CGGGGAGGATGTCTGTGCCTCCCCCGAAAAGAAACGCCTGCTGCCGCGGT ACTTGGACGCGGTGACGGACATGCGAATGGTCATCCTTGCACGCTCGAGC TGGAGGTGGAGATAGTCCGCCTCCTGCAGCGCCACACCCTCAACCTCATC CACCGCTTCCTCTGCGGCGGGGAGGATGTCTGTGCCTCCCCCGAAAAGAA ACGCCTGCTGCCGCGGTACTTGGACGCGGTGACGGACATGCGAATGGTCA TCCTTGCACGCTCGAGGAGCGTGTGGATGTTTGCTTGGGGCTGGGCGTAC CGAGCGTTCTCCCCGTTCTACGTCAGGGAGGCCCGCAACATGGGCCCGAT CCGCGAGTTCGCGGAGCTGGTTCTCGAGACCGCCGAGCGTGTGGATGTTT GCTTGGGGCTGGGCGTACCGAGCGTTCTCCCCGTTCTACGTCAGGGAGGC CCGCAACATGGGCCCGATCCGCGAGTTCGCGGAGCTGGTTCTCGAGACCG CC back to top
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