mRNA_L-elsbetiae_contig698.15758.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig698.15758.1 vs. uniprot
Match: D8LJ07_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ07_ECTSI) HSP 1 Score: 296 bits (759), Expect = 2.300e-90 Identity = 221/495 (44.65%), Postives = 246/495 (49.70%), Query Frame = 3 Query: 48 MSSRRALRISPGITNAGAPSRSQRP-GAASAQLTARLSSRTGGAPLGSASTPSLGRNGTNQLDAHHAVSKADEGDRPLPPLGDWAGGVPPRPNTTTGAFGRPSSISGSQKLEEEGKSRLSTPPRSSPGLSRKDAGLMSVKNRRNDSGASSSPATPSPLYPNQTATSGDSGTAGDKPNPLVGDVAAGIPLGLSKLAREDLEVYVNVVRATLAKQSTTDQAASST--DDATIQSIATSEIAESQDRVRSAGRGRGRARNGRRVPRRVLGKSRSTGGTLNAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRGKATEGGSTVSSVSSVKGRSGADIKWFARSKGSKTLPLRTLMLDPEVNNIPQVSTQSDFRALIKAQNIPHPSYDIDGDGVVSQEDYALAKRFXXXXXXXXXXXXXXIGRRIMTETFLENHQHDIHLYGQGLSQKSMAANVDDISRSRGFKKIISGLREKEKNLVNHSSDGV 1523 MS RR LR+S G+TNA A SRSQR G ASAQLTARLS R GGA LGSASTP+LGR+ N H V + GD PLPPLG W G PPRP TT GA+GRPSS + E G RL TPP +G G + N L+ D A IPLGLSKL REDLEVYVN+VRA LA+Q+ +QAAS++ DD T+Q VNNIPQV+TQSDFRALIKAQNIPHPSYDIDGDGVVSQEDYALAKRFXXXXXXXXXX +GRRIMTE FL+NH+HD+HLYGQGL+QKS+AANV+DISRSRGFKKII GLREKEKN VNH SDGV Sbjct: 1 MSGRRTLRVSQGVTNAAAASRSQRSHGIASAQLTARLSGRMGGALLGSASTPALGRSAHNHQSIH--VPNLEGGDNPLPPLGGWGGATPPRPRTTAGAYGRPSSSNPEIGAGENG--RLFTPP---------------------------------------------NGGGGGEANGLLDDRGADIPLGLSKLDREDLEVYVNIVRANLARQAKKEQAASASLVDDETVQ-------------------------------------------------------------------------------------------------------------------------------------------VNNIPQVATQSDFRALIKAQNIPHPSYDIDGDGVVSQEDYALAKRFXXXXXXXXXXAEKVVGRRIMTEVFLDNHKHDLHLYGQGLAQKSIAANVEDISRSRGFKKIIGGLREKEKNFVNHGSDGV 307
BLAST of mRNA_L-elsbetiae_contig698.15758.1 vs. uniprot
Match: A0A7S1U1N7_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U1N7_9STRA) HSP 1 Score: 166 bits (420), Expect = 1.030e-41 Identity = 92/237 (38.82%), Postives = 123/237 (51.90%), Query Frame = 3 Query: 1077 DIKWFARSKGSKTLPLRTLMLDPEVNNIPQVSTQSDFRALIKAQNIPHPSYDIDGDGVVSQEDYALAKRFXXXXXXXXXXXXXXIGRRIMTETFLENHQHDIHLYGQGLSQKSMAANVDDISRSRGFKKIISGLREKEKNLVNHSSDGVRECVTLKPKSLTRHNFFSNKFDTTAWNDFTRDPRDAGWLESRQHDGSRNQMYFMRKVEARESAQGKLNASYHDDDQFSTRRVTLISDP 1787 D F+R K S PLRT +LDPEVNN+ Q + + K NIPH SYDIDGDG VSQED LAKRF +G+RI+ E F H DIHLYG KS+ NV ++R+ F K ++ L EK S V++C+TL RH ++++KFD TAWND+ PR A L+S Q GSR ++ +RK+ R+ L + + L+ P Sbjct: 130 DYNMFSRPKPSTKNPLRTALLDPEVNNLIQSGSYHELAERRKMLNIPHASYDIDGDGFVSQEDLFLAKRFDLDGNGVLDPDEREVGKRILAEEFFNRHAEDIHLYGDEYEGKSVKENVKALARNVNFFKTMTNLHNMEKTFNERGSMQVKDCLTLSDPKQLRHTWYTDKFDATAWNDYGAAPRRAA-LKSMQQSGSREHLFSLRKIADRDRCAAMLKRKTKPRPRIPQGSMHLVLAP 365
BLAST of mRNA_L-elsbetiae_contig698.15758.1 vs. uniprot
Match: F0XYW8_AURAN (Cytochrome b5 heme-binding domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XYW8_AURAN) HSP 1 Score: 133 bits (334), Expect = 6.090e-30 Identity = 84/242 (34.71%), Postives = 124/242 (51.24%), Query Frame = 3 Query: 1089 FARSKGSKTLPLRTLMLDPEVNNIPQVSTQSDFRALIKAQNIPHPSYDIDGDGVVSQEDYALAKRFXXXXXXXXXXXXXXIGRRIMTETFLENHQHDIHLYG-QGLSQKSMAA---NVDDISRSRGFKKIISGLREKEKNLVNHSSDGVRECVT-LKPKSLTRHNFFSNKFDTTAWNDFTRDPRDAGWLESRQHDGSRNQMYFMRKVEARESAQGKLNASYHDDDQFSTRRVTLISDPAVEN 1799 F+R SK LPLRTL+LDPE NN+P+ T+S+F+ ++ N+PH SYD+DGDG VS +DY ++K GR+ + F NHQ D HLYG Q ++ AA N + ++ + F + L KEK L+NH S + C++ P++ N D +F D H GSR ++ R + R AQ L+ + QFST+R++LI++ A EN Sbjct: 168 FSRPVMSKKLPLRTLLLDPESNNMPRSRTRSEFKKKLRGVNVPHWSYDLDGDGEVSHDDYKISKALDALGTGQLSPVQRTRGRKTLASQFFRNHQRDAHLYGSQWTARPGSAAAEENAERLATNPSFNYSLCKLNMKEKRLINHGSYDMTVCMSDAVPEAPPGA---GNARDAPPPTNFYPDT----------HGGSRQTLFEKRSIATRAMAQSHLDIAETKRPQFSTKRISLITNWAFEN 396
BLAST of mRNA_L-elsbetiae_contig698.15758.1 vs. uniprot
Match: A0A8J2WHH2_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WHH2_9STRA) HSP 1 Score: 82.0 bits (201), Expect = 1.470e-13 Identity = 67/261 (25.67%), Postives = 112/261 (42.91%), Query Frame = 3 Query: 1029 GSTVSSVSSVKGRSGADIKWFARSKGSKTLPLRTLMLDPEVNNIPQVSTQSDFRALIKAQNIPHPSYDIDGDGVVSQEDYALAKRFXXXXXXXXXXXXXXIGRRIMTETFLENHQHDIHLYGQGLS----QKSMAANVDDISRSRGFKKIISGLREKEKNLVNHSSDGVRECVTLKPKSLTRHNFFSNKFDTTAWNDFTRDPRDAGWLESRQHDGSRNQMYFMRKVEARESAQGKLNASYHDDDQFSTRRVTLISDPAVEN 1799 G+T + S G ++ F R++ S+T PLR+++LDPEVNN+P TQ+++ ++ +N H SYD+D DG V+ +DY LA G I+ E F E +G + ++ N ++ S+ F + L +EK L+ +S + C+ PK +G R+ + RK R Q +L+ +++ST+RV+ IS+ A EN Sbjct: 36 GATPRAPSQPAGAPSSERGAFGRTQLSRTSPLRSVLLDPEVNNLPPARTQTEYAEFVRTRNKAHSSYDLDEDGQVTVQDYKLAASLDVDGDGRLDTDRHKEGGLILAERFFERQIVPAKFHGDCWTAREGREGFQENARRLANSQHFGAGLRMLEMREKRLLGRASLNMTACMQA-PKGPD--------------------------------EGPRSHLLAHRKRTERLFGQAQLDKWDAKLEKWSTKRVSPISNLAFEN 263 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig698.15758.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 4
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig698.15758.1 >prot_L-elsbetiae_contig698.15758.1 ID=prot_L-elsbetiae_contig698.15758.1|Name=mRNA_L-elsbetiae_contig698.15758.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=586bp MSSRRALRISPGITNAGAPSRSQRPGAASAQLTARLSSRTGGAPLGSASTback to top mRNA from alignment at L-elsbetiae_contig698:5070..14877- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig698.15758.1 ID=mRNA_L-elsbetiae_contig698.15758.1|Name=mRNA_L-elsbetiae_contig698.15758.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=9808bp|location=Sequence derived from alignment at L-elsbetiae_contig698:5070..14877- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig698:5070..14877- >mRNA_L-elsbetiae_contig698.15758.1 ID=mRNA_L-elsbetiae_contig698.15758.1|Name=mRNA_L-elsbetiae_contig698.15758.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=3516bp|location=Sequence derived from alignment at L-elsbetiae_contig698:5070..14877- (Laminarionema elsbetiae ELsaHSoW15)back to top |