prot_L-elsbetiae_contig11824.1575.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-elsbetiae_contig11824.1575.1
Unique Name	prot_L-elsbetiae_contig11824.1575.1
Type	polypeptide
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length	111

Homology

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BLAST of mRNA_L-elsbetiae_contig11824.1575.1 vs. uniprot
Match: A0A6H5K919_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K919_9PHAE)

HSP 1 Score: 91.7 bits (226), Expect = 1.280e-21
Identity = 54/103 (52.43%), Postives = 68/103 (66.02%), Query Frame = 0

Query:    1 MSRLKALEVLGISSAMLEEEKARILGSLGVTAWRNPGISSVIENSQDNAGSC--LSRKRRNTTS--------EVPRNAASEVAELEDECLSQHLRIQQLELQV 93
            MSRLKALE LG+S AMLEE++ RILG+LG+  W NPG S V      +  +C  + RKR++  +        +  R    EVA+LEDECLSQHLRIQQLEL+V
Sbjct:   14 MSRLKALEQLGVSQAMLEEDRGRILGNLGIPRWGNPGDSMVDTEQDSSTSTCGPIFRKRQHIEATAKRWGLAQPTRQMEVEVAKLEDECLSQHLRIQQLELEV 116

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BLAST of mRNA_L-elsbetiae_contig11824.1575.1 vs. uniprot
Match: D7FYL6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYL6_ECTSI)

HSP 1 Score: 91.3 bits (225), Expect = 5.700e-21
Identity = 55/105 (52.38%), Postives = 68/105 (64.76%), Query Frame = 0

Query:    1 MSRLKALEVLGISSAMLEEEKARILGSLGVTAWRNPGISSVIENSQDNAGSC--LSRKRRNTT--------SEVPRNAASEVAELEDECLSQHLRIQQLELQVAA 95
            MSRLKALE LG+S  MLEE++ RILG LG+  W NPG S V      +  +C  + RKR++          ++  R    EVA+LEDECLSQHLRIQQLEL+VAA
Sbjct:   57 MSRLKALEELGVSQDMLEEDRGRILGDLGIPRWGNPGDSMVDAERDSSTSACGPVFRKRQHIEGTAKRWGLAQPTRQKEVEVAKLEDECLSQHLRIQQLELEVAA 161

[Close]

BLAST of mRNA_L-elsbetiae_contig11824.1575.1 vs. uniprot
Match: D7FYM0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYM0_ECTSI)

HSP 1 Score: 62.0 bits (149), Expect = 3.590e-9
Identity = 45/114 (39.47%), Postives = 66/114 (57.89%), Query Frame = 0

Query:    1 MSRLKALEVLGISSAMLEEEKARILGSLGVTAWRNPGISS--VIENSQDNAGSCLSRKRRNTTSEVPRNAASEVA-------ELEDECLSQHLRIQQLELQVAALTLSESCADN 105
            MS  KAL+VLGIS A++EEE++R LG LG +  R  G S     + ++D  G    +KRR++  E+      EVA       +LE+ C +Q  RIQ+LE Q+A L+   S +D+
Sbjct:  138 MSFHKALQVLGISEAVVEEERSRRLGELG-SGGRGGGASECGAGQEAEDTCGRFFIKKRRSSIEELGTTLPGEVAFANSRVLQLEEVCHTQMTRIQELESQLAVLSARSSTSDS 250

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig11824.1575.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig11824.1575.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
A0A6H5K919_9PHAE	1.280e-21	52.43	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7FYL6_ECTSI	5.700e-21	52.38	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
D7FYM0_ECTSI	3.590e-9	39.47	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 72..92

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig11824	contig	L-elsbetiae_contig11824:1218..2154 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig11824.1575.1	mRNA_L-elsbetiae_contig11824.1575.1	Laminarionema elsbetiae ELsaHSoW15	mRNA	L-elsbetiae_contig11824 1176..3127 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-elsbetiae_contig11824.1575.1 ID=prot_L-elsbetiae_contig11824.1575.1|Name=mRNA_L-elsbetiae_contig11824.1575.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=111bp
MSRLKALEVLGISSAMLEEEKARILGSLGVTAWRNPGISSVIENSQDNAG
SCLSRKRRNTTSEVPRNAASEVAELEDECLSQHLRIQQLELQVAALTLSE
SCADNDKGHG*