prot_L-elsbetiae_contig6973.15750.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig6973.15750.1
Unique Nameprot_L-elsbetiae_contig6973.15750.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length122
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6973.15750.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 3..36
e-value: 1.3
score: 18.0
coord: 87..120
e-value: 280.0
score: 2.3
coord: 45..78
e-value: 1.8
score: 17.6
IPR019734Tetratricopeptide repeatPFAMPF13174TPR_6coord: 89..114
e-value: 0.091
score: 13.4
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 3..36
score: 8.024
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 45..78
score: 6.579
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 87..120
score: 5.133
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 1..122
e-value: 4.2E-31
score: 110.1
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 2..115
NoneNo IPR availablePFAMPF13424TPR_12coord: 2..76
e-value: 4.4E-16
score: 58.9
NoneNo IPR availablePANTHERPTHR45783FAMILY NOT NAMEDcoord: 2..119
NoneNo IPR availablePANTHERPTHR45783:SF3KINESIN LIGHT CHAINcoord: 2..119
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 3..120
score: 10.574

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6973contigL-elsbetiae_contig6973:5347..5712 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6973.15750.1mRNA_L-elsbetiae_contig6973.15750.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig6973 5347..5712 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig6973.15750.1 ID=prot_L-elsbetiae_contig6973.15750.1|Name=mRNA_L-elsbetiae_contig6973.15750.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=122bp
RVAHTLNALGRCLIAGGRLEEAEDTLRRSLAIDEAKLGREHVTLVYALSD
LGICLHNAGRWQEAEGILRRSLAIREDALGTAHNQTNNSLYNLGVCLRSE
GRRREAGDILRRCLPFYEVKHS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom_sf
IPR013026TPR-contain_dom