prot_L-elsbetiae_contig6970.15748.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig6970.15748.1
Unique Nameprot_L-elsbetiae_contig6970.15748.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length944
Homology
BLAST of mRNA_L-elsbetiae_contig6970.15748.1 vs. uniprot
Match: D7G531_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G531_ECTSI)

HSP 1 Score: 139 bits (351), Expect = 5.120e-30
Identity = 198/547 (36.20%), Postives = 234/547 (42.78%), Query Frame = 0
Query:  319 RVSPVASAMPHGLTVQELKELTKMRLAREAFSIPVHKASASILPGEPHSSSGXXXXXXXXXXXXXXXXXXXXXXXXXXCERRRRQRYPESRSPMSRSTPSSPGVGPDGGRLHRRTRRGGRRGRKSRSPRPDGQHSPRLGDGDGXXXXXXXXXXXXXXXXXX---PRAGGRSLADDRYPWGNLLDDDDHGHPRSASQPRTVSRDDHRHFSAXXXXXXXXXXXXXXXXXXXXXXXXXXXSCRNRQRSDAAPEDEASPPVAAGDPVDAGASSAGPSSRGRPVGLPLLSAG--TAGGDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSLSAQP------------GSGSGPSSLEMGDAASWAQEVGADDRPGRRDSG--GGSRREASSAGDHYRPHHGDTSGSSRGRERDVMERT-GMSARDRPRSLHHLD-------RRNFAEEXXXXXXXXXXFRQAGHHRGP--AAPHVNGMIGSERLSTLRGFEDGAAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSSLPRMHRASSDGHVMTS 836
            R +  ASAMPHGLTVQELKELTK+RLAREA + P   AS S LPG     +                              RRR  + +SRSP+ RS+PS+PGV     R HRRTRRGGRRGR +RSPRP+GQ+SP+LG  D                      PR   RS++D   PW    DD+   HPRS+SQPR VSRDD++  S                              R    ++AA   E    ++  D                   L L + G  T+GG GXXXXXXXXXXXXXXX                 + S+              GSG   S L MGD   WAQE     R  RR  G  GG R  ++ AG     HH D  G   GR+RD +ER  G  + DRPRSLHHLD       RR FAEE                 RGP  +   V+GMIG ERL+ L GFE+  A                                   P S PRM RA SDG V  S
Sbjct:  118 RGAQFASAMPHGLTVQELKELTKIRLAREALTAPAQPAS-SALPGAQQERNNPCSDGGGGDFGRGRAVSPARSGDLG----RRRGGHADSRSPVPRSSPSTPGVED---RPHRRTRRGGRRGR-NRSPRPNGQYSPKLGGEDSHQHRDLRHHLYHDGYSSASPSPRIR-RSMSD---PWAYADDDE---HPRSSSQPRAVSRDDNQVASGEVSGGGSIGPAPAASGVGRGGGASSGVE-RGPTEAEAAAAAERLSAISCPD-------------------LTLEAKGHPTSGGGGXXXXXXXXXXXXXXXRGLPTEQQPPSTMLPEAASSSSGRRPVSMPLPSAGGSGQSSSLLMMGDEL-WAQEF----RDLRRQDGAAGGVRGSSADAGITAGDHH-DRGG---GRDRDPLERAAGGWSGDRPRSLHHLDGGQLAEERRRFAEEQVR-------------ERGPGGSTARVHGMIGGERLTPLSGFEESDASASHARRFYQEQQHQRQYH----------------PHSYPRMQRARSDGLVAES 590          
BLAST of mRNA_L-elsbetiae_contig6970.15748.1 vs. uniprot
Match: A0A6H5KAZ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAZ7_9PHAE)

HSP 1 Score: 132 bits (333), Expect = 9.090e-28
Identity = 215/620 (34.68%), Postives = 259/620 (41.77%), Query Frame = 0
Query:  210 SAVGEHA---PPGP-RQRSSGLPAAEVAAISPA---------DEPAVPATPSSTCS--GHSSRSGGPMSGG---LGERSLSPLG-GRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSRVSPVASAMPHGLTVQELKELTK-MRLAREAFSIPVHKASASILPG-----EPHSSSGXXXXXXXXXXXXXXXXXXXXXXXXXXCERRRRQRYPESRSPMSRSTPSSPGVGPDGGRLHRRTRRGGRRGR-----------KSRSPRPDGQH-SPRLGDGDGXXXXXXXXXXXXXXXXXX---PRAGGRSLADDRYPWGNLLDDDDHGHPRSASQPRTVSRDDHRHFSAXXXXXXXXXXXXXXXXXXXXXXXXXXXSCRNRQRSDAAPEDEASPPVAAGD-PVDAGASSAGPSSRGRPVGLPLLSAGTAGGDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSLS----AQPGSGSGPSSLEMGDAASWAQEVGADDRPGRRDSG--GGSRREASSAGDHYRPHHGDTSGSSRGRERDVMERT-GMSARDRPRSLHHLDRRNFAEEXXXXXXXXXXFRQAGHHRGP--AAPHVNGMIGSERLSTLRGFED 779
            S VG  A   PP P RQ    + AA  AA++ +         D PA+P TPSST S  GHSSRSG  + GG   LG RS+SP+G GR                                       + R +  ASAMPHGLTVQELKELTK MRLAREA + P   AS S LPG      P S  G                             R R  + +SRSP+ RS+PS+PGV     R HRRTRRGGRRG            +SRSPRP+GQ+ SP+LGD D                      PR   R + D   PW    DD    H RS+SQPR VSRDD++                                 R    ++AA   E    +++ D  ++A         +G P       +G   G G   XXXXXX                      R +S    +  GSG   S L +GD   WAQE     R  RR  G  GG R  A+ AG     HH D  G   GR+ D +ER  G  + DRPRSLHHLDR   AEE                 RGP  +   V+GMIG ERL+ L GFE+
Sbjct:    5 STVGGSAGDQPPHPLRQDGMNVTAAAAAAVASSGPVGRGHGGDVPAMPPTPSSTTSSGGHSSRSG--VRGGNVNLGGRSVSPIGNGRRRQSPLARPLGGSSRGGGAGA------------------APRGAQFASAMPHGLTVQELKELTKVMRLAREALTAPAPPAS-SALPGTQQRNNPGSDGGLGDFGRGRAISPALSGDLG----------RPRGGHADSRSPVPRSSPSTPGVED---RPHRRTRRGGRRGPNXXXXXXXPVVESRSPRPNGQYYSPKLGDEDSHQHRDLRHHLYHDGYSSASPSPRIR-RGMTD---PWAYADDDQ---HLRSSSQPRAVSRDDNQ--VTPLEVSGGGSIGPAPAASGVGREGDPGGGERGSTEAEAAAAAERLSAISSPDLTLEA---------KGHPT---FGGSGDGAGYGSPHXXXXXXGRPNQQQPSTMLPEAASSSSGRRPVSMPLPSAGGSGQSSSLLMVGDEL-WAQEF----RDLRRQGGAAGGGRGSAADAGISAGDHH-DRGG---GRDGDPLERAAGGWSEDRPRSLHHLDRGQLAEERRRFAEDQVR------ERGPGGSTARVHGMIGGERLTPLSGFEE 554          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6970.15748.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G531_ECTSI5.120e-3036.20Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KAZ7_9PHAE9.090e-2834.68Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6970contigL-elsbetiae_contig6970:2700..10105 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6970.15748.1mRNA_L-elsbetiae_contig6970.15748.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig6970 2558..10389 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig6970.15748.1 ID=prot_L-elsbetiae_contig6970.15748.1|Name=mRNA_L-elsbetiae_contig6970.15748.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=944bp
MSPTPTDVGMPGNSQQQEPAAPVKETQLFAEAAALAEDTSSVSSHGASSP
SPGSAEPPPPPPPPTGRRSPPPPISAGGSLTTGISVRELKKATALRMATQ
QQAHQRVGSSPFHYGGGGGGGGAAAGGVHHPPRSRGSSPNPAAPASRGDR
DRDQDTTSGESSGNSAAGGSSGHHHHHHHHHRPVFPKAPSSRSIGGGSGV
GGGGAAAPPSAVGEHAPPGPRQRSSGLPAAEVAAISPADEPAVPATPSST
CSGHSSRSGGPMSGGLGERSLSPLGGRRRHTPPPPPPPPPPPPPPPPLAL
SRGGDGGGGGGSGGGGSSRVSPVASAMPHGLTVQELKELTKMRLAREAFS
IPVHKASASILPGEPHSSSGGGGGAGRGRAAAASPAPSVDHPGAGACERR
RRQRYPESRSPMSRSTPSSPGVGPDGGRLHRRTRRGGRRGRKSRSPRPDG
QHSPRLGDGDGGGYHHHYHHDGYSSASSSPRAGGRSLADDRYPWGNLLDD
DDHGHPRSASQPRTVSRDDHRHFSAAAAPAAAAAADTSSVNGEGGGGGGR
GGSCRNRQRSDAAPEDEASPPVAAGDPVDAGASSAGPSSRGRPVGLPLLS
AGTAGGDGDGGGGGGGGGPNQGHPPLVAAAAAAAAAGGGRSLSAQPGSGS
GPSSLEMGDAASWAQEVGADDRPGRRDSGGGSRREASSAGDHYRPHHGDT
SGSSRGRERDVMERTGMSARDRPRSLHHLDRRNFAEEDRRNFAAEEQFRQ
AGHHRGPAAPHVNGMIGSERLSTLRGFEDGAAPPASSRHRPPHHYYHHQH
HRAPNDQPPQQQQQQQQPSSLPRMHRASSDGHVMTSRSRSHSQQRHYPQP
HHADHATGSTGGGGGGLRGGGRYQGRGGDGSAYHDSAHRNPPPHHHHHHH
PHHHQNFPGWATITTLTTTSSPAPTTTAMAPPTLSSTSCGRAG*
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