mRNA_L-elsbetiae_contig6969.15742.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig6969.15742.1 vs. uniprot
Match: D8LHL7_ECTSI (Glutaredoxin n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHL7_ECTSI) HSP 1 Score: 254 bits (650), Expect = 1.570e-83 Identity = 129/169 (76.33%), Postives = 142/169 (84.02%), Query Frame = 2 Query: 41 QRLAAYNSSPYSSDADPTT----------TASMSFRSPLDVLKQGIAKAGAGPYDKDAVLKLVEEYTSGSTKVVVFSWTRCPFCKKAKRLVEDLLDDPADYEFVELDER*DGNAIRYELSQITGRTSVPQIWIGGEFVGGCNDGPGVFTLMEKGELVPMLEAVGCALRE 517 QRLAAY++SP S T T +M F+SP+DVLKQGIAK GAGPYDKDAV+K+V+ YTSGS KVVVFSWTRCPFCKKAK L+EDLL DPADYEFVELDER DGNAIRYELSQ TGRTSVPQIWIGGEFVGGCNDGPGVFTLM+KGELVPMLE+ GCAL++ Sbjct: 33 QRLAAYSNSPPCSKGSVTARHRSVRRTTRTTTMGFKSPVDVLKQGIAKIGAGPYDKDAVVKVVDGYTSGSNKVVVFSWTRCPFCKKAKGLIEDLLADPADYEFVELDERQDGNAIRYELSQKTGRTSVPQIWIGGEFVGGCNDGPGVFTLMDKGELVPMLESAGCALKK 201
BLAST of mRNA_L-elsbetiae_contig6969.15742.1 vs. uniprot
Match: A0A835YLP8_9STRA (Selenoprotein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLP8_9STRA) HSP 1 Score: 145 bits (367), Expect = 8.470e-41 Identity = 73/133 (54.89%), Postives = 99/133 (74.44%), Query Frame = 2 Query: 119 SPLDVLKQGIAKAGAGPYDKDAVLKLVEEYTSGSTKVVVFSWTRCPFCKKAKRLVEDLLDDPADYEFVELDER*D-GNAIRYELSQITGRTSVPQIWIGGEFVGGCNDGPGVFTLMEKGELVPMLEAVGCALR 514 SP + K+ IAKAG G Y++ V + Y + + KV+VFSWT CPFCKKAK + +L++ P+ Y+ VELD+ + G A R+ELS+ITGRTSVPQIWI GEF+GGCNDGPG+ TL ++G+LVPML+ GC ++ Sbjct: 57 SPFNQFKKFIAKAGTGEYNEAEVAGKINSYIADN-KVMVFSWTNCPFCKKAKAQLAELME-PSQYKVVELDQDAELGKAYRFELSKITGRTSVPQIWIKGEFIGGCNDGPGLLTLQKQGKLVPMLKKAGCKVK 187
BLAST of mRNA_L-elsbetiae_contig6969.15742.1 vs. uniprot
Match: A0A8J9RIT3_9CHLO (Probable Glutaredoxin at C-terminar half n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9RIT3_9CHLO) HSP 1 Score: 131 bits (329), Expect = 5.010e-35 Identity = 71/128 (55.47%), Postives = 87/128 (67.97%), Query Frame = 2 Query: 119 SPLDVLKQGIAKAGAGPYDKDAVLKLVEEYTSGSTKVVVFSWTRCPFCKKAKRLVEDLLDDPADYEFVELDER*DGNAIRYELSQITGRTSVPQIWIGGEFVGGCNDGPGVFTLMEKGELVPMLEAVG 502 SP + +K+ IA A AG YD+ A+ V+ Y + VVVFSWTRCPFC KAKR ++ L A Y VELD DGNAIR EL++ T RTS+P +WI GE +GGCNDGPG+ TL GELVPML+ G Sbjct: 67 SPANAVKKAIAAAQAGQYDEAAIGGKVDAYIKDNP-VVVFSWTRCPFCIKAKRELDSLN---AKYLAVELDTMADGNAIRSELAKRTNRTSMPNVWINGEGIGGCNDGPGLMTLQRNGELVPMLKRAG 190
BLAST of mRNA_L-elsbetiae_contig6969.15742.1 vs. uniprot
Match: A0A2P6TGA2_CHLSO (Glyoxalase domain-containing 4 n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TGA2_CHLSO) HSP 1 Score: 126 bits (317), Expect = 1.860e-33 Identity = 69/129 (53.49%), Postives = 88/129 (68.22%), Query Frame = 2 Query: 125 LDVLKQG---IAKAGAGPYDKDAVLKLVEEYTSGSTKVVVFSWTRCPFCKKAKRLVEDLLDDPADYEFVELDER*DGNAIRYELSQITGRTSVPQIWIGGEFVGGCNDGPGVFTLMEKGELVPMLEAVG 502 LD QG A A AG YD+ A +E+Y + + VVVFSW+ CPFCK+AK +++ A Y +ELD+ DG A+R EL++ TGR+SVP IWI G+ VGGCNDGPGV TL +KGELVPML+A G Sbjct: 47 LDFFNQGKVQAAVAAAGQYDEAATKAAIEKYIADNP-VVVFSWSGCPFCKRAKAVLDAT---GAKYTALELDQMADGKALRAELAKKTGRSSVPNIWIAGQNVGGCNDGPGVATLQDKGELVPMLKAAG 171
BLAST of mRNA_L-elsbetiae_contig6969.15742.1 vs. uniprot
Match: A0A7S2V0C9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V0C9_9STRA) HSP 1 Score: 122 bits (305), Expect = 8.200e-32 Identity = 71/135 (52.59%), Postives = 91/135 (67.41%), Query Frame = 2 Query: 104 SMSFRSPLDVLKQGIAKAGAGPYDKDAVLKLVEEYTSGSTKVVVFSWTRCPFCKKAKR-LVEDLLDDPADYEFVELDER*D-GNAIRYELSQITGRTSVPQIWIGGEFVGGCNDGPGVFTLMEKGELVPMLEAVG 502 S+S P+ KQ IA A AG YDK + +++ ++ VV+FSWT CPFCKKAK+ L+ED+ A + VELDE GNAIR EL + TGRTSVP IW+G E+VGGCNDGPGVF L +G+L P+L + G Sbjct: 24 SISQVGPVAFFKQSIADAVAGDYDKVEINNEIDKAIENNS-VVIFSWTTCPFCKKAKQFLIEDI---GATVKVVELDEDPKIGNAIRAELGKRTGRTSVPSIWVGKEYVGGCNDGPGVFPLEAQGKLRPLLNSSG 154
BLAST of mRNA_L-elsbetiae_contig6969.15742.1 vs. uniprot
Match: A0A383W3I8_TETOB (Glutaredoxin domain-containing protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383W3I8_TETOB) HSP 1 Score: 122 bits (306), Expect = 1.240e-31 Identity = 69/129 (53.49%), Postives = 89/129 (68.99%), Query Frame = 2 Query: 119 SPLDVLKQGIAKAGAGPYDKDAVLKLVEEYTSGSTKVVVFSWTRCPFCKKAKRLVEDLLDDPADYEFVELDER*-DGNAIRYELSQITGRTSVPQIWIGGEFVGGCNDGPGVFTLMEKGELVPMLEAVG 502 SP++ K+ +AKA AG YD+ AV +E + KV+VFSW+ CPFCK AK L+ D+ AD+ +ELD +G IR EL+ +T RTSVP IWI G+ VGGCNDGPGV TL ++GELVPML+A G Sbjct: 60 SPINEGKKALAKAQAGDYDEKAVRGKIEGLIKDN-KVMVFSWSGCPFCKNAKALLSDV---GADFTALELDTLGQEGKQIRAELAAMTERTSVPNIWIAGKNVGGCNDGPGVMTLHKQGELVPMLKAAG 184
BLAST of mRNA_L-elsbetiae_contig6969.15742.1 vs. uniprot
Match: A0A061R5D6_9CHLO (Glutaredoxin-like protein n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061R5D6_9CHLO) HSP 1 Score: 121 bits (304), Expect = 5.350e-31 Identity = 70/129 (54.26%), Postives = 89/129 (68.99%), Query Frame = 2 Query: 119 SPLDVLKQGIAKAGAGPYDKDAVLKLVEEYTSGSTKVVVFSWTRCPFCKKAKRLVEDLLDDPADYEFVELDER*-DGNAIRYELSQITGRTSVPQIWIGGEFVGGCNDGPGVFTLMEKGELVPMLEAVG 502 SPL+ K +AK AG YDK AV VE S S KVVVFS++ CPFC KAK L++D+ A+YE VEL++ +G AIR EL+++TGRTS+P IWI GE +GGCNDGPG+ +L G L+P LE G Sbjct: 86 SPLNKGKIELAKLQAGDYDKTAVRAKVENXIS-SEKVVVFSFSTCPFCVKAKELLQDV---GAEYEAVELNDMGKEGYAIRAELAELTGRTSMPNIWIAGEGIGGCNDGPGIMSLHRXGLLLPKLEKAG 210
BLAST of mRNA_L-elsbetiae_contig6969.15742.1 vs. uniprot
Match: A0A2V0PHJ4_9CHLO (Glutaredoxin domain-containing protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0PHJ4_9CHLO) HSP 1 Score: 117 bits (293), Expect = 1.010e-29 Identity = 68/133 (51.13%), Postives = 91/133 (68.42%), Query Frame = 2 Query: 119 SPLDVLKQGIAKAGAGPYDKDAVLKLVEEYTSGSTKVVVFSWTRCPFCKKAKRLVEDLLDDPADYEFVELDER*-DGNAIRYELSQITGRTSVPQIWIGGEFVGGCNDGPGVFTLMEKGELVPMLEAVGCALR 514 SPL+ K+ +AK AG YD+ AV +E +G T VV+FS++ CPFC +AK L+ +L A YE +EL+E DG +R EL+Q+T RTS+P IWI G FVGGCNDGPG+ L ++G+LVP+L G ALR Sbjct: 57 SPLNKGKKALAKLQAGDYDEAAVRAKLEGILTG-TPVVMFSFSTCPFCNRAKALLNEL---GASYEAIELNEMGKDGMQLRAELAQMTDRTSMPSIWIQGSFVGGCNDGPGIMPLHKQGKLVPLLREAG-ALR 184
BLAST of mRNA_L-elsbetiae_contig6969.15742.1 vs. uniprot
Match: A0A7S1S2G3_ALECA (Hypothetical protein n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1S2G3_ALECA) HSP 1 Score: 115 bits (289), Expect = 6.820e-29 Identity = 68/132 (51.52%), Postives = 93/132 (70.45%), Query Frame = 2 Query: 122 PLDVLKQGIAKAGAGPYDKDAVLKLVEEYTSGSTKVVVFSWTRCPFCKKAKRLVEDLLDDPADYEFVELDER*D-GNAIRYELSQITGRTSVPQIWIGGEFVGGCNDGPGVFTLMEKGELVPMLEAVGCALR 514 PL+ K AK+ AG YD+ A +E+Y S + KVVVFS+ +CPFC KAKR ++D+ ADY V+LD+ D G +R EL++ T RTS+P I++ G+ +GGCNDGPG+ TL ++G+LVPMLEA G ALR Sbjct: 78 PLNDAKIWFAKSQAGEYDEAATSAKLEKYISDN-KVVVFSYAKCPFCIKAKRELDDM---GADYLPVDLDQMGDEGMQLRAELAKKTSRTSMPNIFVAGKGIGGCNDGPGMMTLKKEGKLVPMLEAAG-ALR 204
BLAST of mRNA_L-elsbetiae_contig6969.15742.1 vs. uniprot
Match: A0A2P6V558_9CHLO (NADP-dependent glyceraldehyde-3-phosphate dehydrogenase n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6V558_9CHLO) HSP 1 Score: 121 bits (304), Expect = 1.540e-28 Identity = 66/128 (51.56%), Postives = 88/128 (68.75%), Query Frame = 2 Query: 119 SPLDVLKQGIAKAGAGPYDKDAVLKLVEEYTSGSTKVVVFSWTRCPFCKKAKRLVEDLLDDPADYEFVELDER*DGNAIRYELSQITGRTSVPQIWIGGEFVGGCNDGPGVFTLMEKGELVPMLEAVG 502 SPL+ K +A + AG YD A ++++ + + VVFSW+ CPFCK AK +++ A Y +ELD+R DG AIR EL+++TGR+SVP IWIG E VGGCNDGPGV TL +G+LVPML+A G Sbjct: 22 SPLNQGKVALAVSQAGDYDAAATKAMIDQAIADNG-CVVFSWSGCPFCKNAKAVLDAT---GAKYVALELDQRPDGKAIRAELAKMTGRSSVPNIWIGKENVGGCNDGPGVATLKNEGKLVPMLQAAG 145 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6969.15742.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig6969.15742.1 >prot_L-elsbetiae_contig6969.15742.1 ID=prot_L-elsbetiae_contig6969.15742.1|Name=mRNA_L-elsbetiae_contig6969.15742.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=116bp PHEGDRVRQERLQAAPGRLQQQPVQQRCRSHDDGVHELQEPPGRAQAGDRback to top mRNA from alignment at L-elsbetiae_contig6969:2912..5518- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig6969.15742.1 ID=mRNA_L-elsbetiae_contig6969.15742.1|Name=mRNA_L-elsbetiae_contig6969.15742.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2607bp|location=Sequence derived from alignment at L-elsbetiae_contig6969:2912..5518- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig6969:2912..5518- >mRNA_L-elsbetiae_contig6969.15742.1 ID=mRNA_L-elsbetiae_contig6969.15742.1|Name=mRNA_L-elsbetiae_contig6969.15742.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=696bp|location=Sequence derived from alignment at L-elsbetiae_contig6969:2912..5518- (Laminarionema elsbetiae ELsaHSoW15)back to top |