mRNA_L-elsbetiae_contig11822.1574.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
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Overview
Homology
BLAST of mRNA_L-elsbetiae_contig11822.1574.1 vs. uniprot
Match: A0A6H5KZX0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZX0_9PHAE) HSP 1 Score: 185 bits (470), Expect = 1.690e-51 Identity = 103/159 (64.78%), Postives = 119/159 (74.84%), Query Frame = 1
Query: 1 RKRGGAGAGKKRGRPSTKQEGEGEPMSPLSPSKVAALRGNGKKFKLMEKGDKCLVWDQDAGANRRRNLVASGSNMNVHPLSPARERPPGKEKVGAAAQAFCTQSEVGISEWLSGRLELPPGAIKDSESVTLSTQIYVVAEGQPDALELAIARPQKKARR 477
RKRGG GKKR RP ++ E MSPLSPSKV+ +R N KKFKLMEK KCLVWD++ A + R +V S SN+ H ++ +R PGKEK+G AAQAF EVGISEWL+GRLELPPGAIKDSE V LSTQIYVVAEGQPDALE+AIA P KK +R
Sbjct: 710 RKRGGE--GKKRRRPPAVKD---EHMSPLSPSKVSEMRKN-KKFKLMEKDQKCLVWDEETAAFKTRQVVMSSSNLVSHDVTATHQRAPGKEKIGQAAQAFLVGPEVGISEWLTGRLELPPGAIKDSEHVALSTQIYVVAEGQPDALEIAIAMPSKKTKR 862
BLAST of mRNA_L-elsbetiae_contig11822.1574.1 vs. uniprot
Match: D8LJZ6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJZ6_ECTSI) HSP 1 Score: 181 bits (459), Expect = 4.430e-50 Identity = 97/151 (64.24%), Postives = 114/151 (75.50%), Query Frame = 1
Query: 25 GKKRGRPSTKQEGEGEPMSPLSPSKVAALRGNGKKFKLMEKGDKCLVWDQDAGANRRRNLVASGSNMNVHPLSPARERPPGKEKVGAAAQAFCTQSEVGISEWLSGRLELPPGAIKDSESVTLSTQIYVVAEGQPDALELAIARPQKKARR 477
GKKR RP ++ E MSPLSPSKV+ +R + KKFKLMEK KCLVWD++ A + R +V S SN+ H ++ +R PGKEK+G AAQAF EVGISEWL+GRLELPPGAIKDSE V LSTQIYVVAEGQPDALE+AIA P KK +R
Sbjct: 618 GKKRRRPPAVKD---EHMSPLSPSKVSEMRKS-KKFKLMEKDQKCLVWDEETAAFKTRQVVMSSSNLVSHDVTATHQRAPGKEKIGQAAQAFLVGPEVGISEWLTGRLELPPGAIKDSEHVALSTQIYVVAEGQPDALEIAIAMPSKKTKR 764
BLAST of mRNA_L-elsbetiae_contig11822.1574.1 vs. uniprot
Match: A0A7S2B2G0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B2G0_9STRA) HSP 1 Score: 64.3 bits (155), Expect = 1.380e-9 Identity = 41/110 (37.27%), Postives = 59/110 (53.64%), Query Frame = 1
Query: 148 GDKCLVWDQDAGANRRRNLVASGSNMNVH----PLSPARERPPGKEKVGAAAQAFCTQS--EVGISEWLSGRLELPPGAIKDSESVTLSTQIYVVAEGQPDALELAIARP 459
G K VW + ++ +V +M + P++ R G E VG AAQ+F S I W+SG + LPP AIKD+E V +Q++ VAE QP++ EL+IA P
Sbjct: 5 GSKGWVWSEKEQGTKKMKIVNRQESMQKNTRDLPITTDRAEHEGVE-VGQAAQSFLMDSIPSQRIPGWISGFVTLPPLAIKDAEGVGFCSQVFFVAECQPESFELSIADP 113
BLAST of mRNA_L-elsbetiae_contig11822.1574.1 vs. uniprot
Match: A0A067CPM9_SAPPC (Uncharacterized protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CPM9_SAPPC) HSP 1 Score: 65.5 bits (158), Expect = 1.880e-9 Identity = 38/115 (33.04%), Postives = 58/115 (50.43%), Query Frame = 1
Query: 127 KFKLMEKGDKCLVWDQDAGANRRRNLVASGSNMNVHPLSPARERPPGKEKVGAAAQAFCTQSEVGISEWLSGRLELPPGAIKDSESVTLSTQIYVVAEGQPDALELAIARPQKKA 471
K+ + G+ +WD+ + ++ ++ ++ PL PA + P G A Q F + W+SGR+ LPPGA+K SESV Q++VV QP ALE+A P A
Sbjct: 415 KYSTADAGE---LWDEASATSKTVKMIGRYGTADLFPL-PAEDGVPS----GFACQTFNVVGSTSVPTWISGRVLLPPGAVKASESVGSCAQVFVVIGCQPMALEVAFGHPSSPA 521
BLAST of mRNA_L-elsbetiae_contig11822.1574.1 vs. uniprot
Match: T0QG80_SAPDV (Mif2_N domain-containing protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0QG80_SAPDV) HSP 1 Score: 65.5 bits (158), Expect = 1.950e-9 Identity = 36/111 (32.43%), Postives = 57/111 (51.35%), Query Frame = 1
Query: 127 KFKLMEKGDKCLVWDQDAGANRRRNLVASGSNMNVHPLSPARERPPGKEKVGAAAQAFCTQSEVGISEWLSGRLELPPGAIKDSESVTLSTQIYVVAEGQPDALELAIARP 459
K+ + G+ +WD+ + ++ ++ ++ PL PA + P G A Q F + W+SGR+ LPPGA+K SESV Q+++V QP ALE+A P
Sbjct: 559 KYSTADSGE---LWDEASATSKNVKMIGRYGTADLFPL-PAEDGVPS----GFACQTFNVVGSTSVPTWISGRVLLPPGAVKASESVGSCAQVFIVIGCQPMALEVAFGHP 661
BLAST of mRNA_L-elsbetiae_contig11822.1574.1 vs. uniprot
Match: A0A1V9YEP0_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YEP0_9STRA) HSP 1 Score: 60.8 bits (146), Expect = 7.600e-8 Identity = 32/99 (32.32%), Postives = 47/99 (47.47%), Query Frame = 1
Query: 163 VWDQDAGANRRRNLVASGSNMNVHPLSPARERPPGKEKVGAAAQAFCTQSEVGISEWLSGRLELPPGAIKDSESVTLSTQIYVVAEGQPDALELAIARP 459
+WD+ A + ++ + L PP G A Q F + W+SGR+ LPP A+K ESV TQ++VV QP+ALE++ P
Sbjct: 456 LWDEAAATAKTVKMIGRYGTSDTFALPATDGHPP-----GFAGQTFNVVGNASVPTWISGRVLLPPQALKAPESVGACTQVFVVVACQPNALEVSFGHP 549
BLAST of mRNA_L-elsbetiae_contig11822.1574.1 vs. uniprot
Match: A0A448Z4G1_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z4G1_9STRA) HSP 1 Score: 58.5 bits (140), Expect = 4.820e-7 Identity = 47/130 (36.15%), Postives = 63/130 (48.46%), Query Frame = 1
Query: 100 VAALRGNGKKFKLMEK---GDKCLVWDQDAGANRRRNLVASGSNMNVH--PLSPARERPPGKEKVGAAAQAFCTQSE-----VGISEWLSGRLELPPGAIKDSESVTLSTQIYVVAEGQPDALELAIARP 459
VA + N KK + K G++ +WD A + +VA SNM P+S R++ G G AAQAF ++ VG ++ G L LPPG IKDSESV Q + V Q A E+A P
Sbjct: 461 VADEKFNSKKLRRKYKYHDGEEAYLWDDIADETADQKVVAYASNMQGSDLPISKKRKKEEGNV-TGKAAQAFNIPNDDSDDYVG---YIMGNLTLPPGGIKDSESVGPCAQTFTVVRCQLKAFEVAYGDP 586
BLAST of mRNA_L-elsbetiae_contig11822.1574.1 vs. uniprot
Match: A0A6G0X555_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X555_9STRA) HSP 1 Score: 57.8 bits (138), Expect = 9.230e-7 Identity = 31/99 (31.31%), Postives = 46/99 (46.46%), Query Frame = 1
Query: 163 VWDQDAGANRRRNLVASGSNMNVHPLSPARERPPGKEKVGAAAQAFCTQSEVGISEWLSGRLELPPGAIKDSESVTLSTQIYVVAEGQPDALELAIARP 459
+WD+ + + ++ + L + P G A Q F + W+SGRL LPP A+K ESV TQ++VV QP +LE+A P
Sbjct: 657 LWDELTNKSSKMRMICRNKASEIFALPGVDDYP-----CGFAGQTFNLPGGPALPTWISGRLVLPPQAVKQPESVGNCTQVFVVMSCQPGSLEVAYGHP 750
BLAST of mRNA_L-elsbetiae_contig11822.1574.1 vs. uniprot
Match: A0A1Z5K7V0_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K7V0_FISSO) HSP 1 Score: 57.4 bits (137), Expect = 1.190e-6 Identity = 39/114 (34.21%), Postives = 51/114 (44.74%), Query Frame = 1
Query: 124 KKFKLMEKGDKCLVWDQDAGANRRRNLVASGSNMNVHPLSPARERPPGKEKVGAAAQAF--CTQSEVGISEWLSGRLELPPGAIKDSESVTLSTQIYVVAEGQPDALELAIARP 459
KK+K ++ D VWD +V M L R + VG A+QAF T S ++ G L LPPG IKD ESV Q + V GQ +ALE++ P
Sbjct: 404 KKYKYID-SDTAYVWDDCYERADDLAVVGYKDRMVARKLPMQRRHKSDGKVVGVASQAFNVSTDSNPVYPSYIMGNLTLPPGGIKDPESVGACAQTFTVVTGQKNALEISYGDP 516
BLAST of mRNA_L-elsbetiae_contig11822.1574.1 vs. uniprot
Match: A0A1V9Z5W9_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Z5W9_9STRA) HSP 1 Score: 52.4 bits (124), Expect = 6.560e-5 Identity = 33/100 (33.00%), Postives = 50/100 (50.00%), Query Frame = 1
Query: 163 VWDQDAGANRRRNLVASGSNMNVHPLSPARERPPGKEKVGAAAQAF-CTQSEVGISEWLSGRLELPPGAIKDSESVTLSTQIYVVAEGQPDALELAIARP 459
+WD+ + ++ ++ M+ H P E P A Q F + + + W+SGRL +PP A+K ESV TQ++VV QP ALE+A P
Sbjct: 530 LWDEASETSKTIKMIGRYGTMD-HVALPTEEGFPSC----FAGQTFNISGGKTTLPSWVSGRLLMPPLAVKQPESVGSCTQLFVVVSCQPGALEVAYGHP 624 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig11822.1574.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig11822.1574.1 >prot_L-elsbetiae_contig11822.1574.1 ID=prot_L-elsbetiae_contig11822.1574.1|Name=mRNA_L-elsbetiae_contig11822.1574.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=159bp RKRGGAGAGKKRGRPSTKQEGEGEPMSPLSPSKVAALRGNGKKFKLMEKGback to top mRNA from alignment at L-elsbetiae_contig11822:4..3746- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig11822.1574.1 ID=mRNA_L-elsbetiae_contig11822.1574.1|Name=mRNA_L-elsbetiae_contig11822.1574.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3743bp|location=Sequence derived from alignment at L-elsbetiae_contig11822:4..3746- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig11822:4..3746- >mRNA_L-elsbetiae_contig11822.1574.1 ID=mRNA_L-elsbetiae_contig11822.1574.1|Name=mRNA_L-elsbetiae_contig11822.1574.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=954bp|location=Sequence derived from alignment at L-elsbetiae_contig11822:4..3746- (Laminarionema elsbetiae ELsaHSoW15)back to top |