mRNA_L-elsbetiae_contig696.15735.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_L-elsbetiae_contig696.15735.1
Unique Name	mRNA_L-elsbetiae_contig696.15735.1
Type	mRNA
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)

Homology

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BLAST of mRNA_L-elsbetiae_contig696.15735.1 vs. uniprot
Match: A0A6H5KXK5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXK5_9PHAE)

HSP 1 Score: 198 bits (504), Expect = 3.080e-56
Identity = 162/266 (60.90%), Postives = 195/266 (73.31%), Query Frame = 3

Query:   87 SLRFSPLKVPVIHMATNPGYETTLGALIEHGADVEAENGTQETTLHAAAWFNNAEAIDVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLILAASKAGTQGAAEVVDYLLRAGADETIVKNDGRKASDVIGAAVEEEDRLADDIQRVRKLLANAPADRAWRRRGYLVLCRSHPDRVQQKNQVISGAHHIDAGRRTRSRAELAMVIGEVARDSTVNQNTGGDWAVVVTNVLQLQEEGIFRTIVGYL 884
            +LR +  K P  H A   G+   L A+IEHGADV+A +  Q T                XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX       L+ A  +AG QGAAEVV+ LLRAGADETI    G KA D+IG  VEEEDRL +D++RVR+LLANAPADRAWRRRGYL++CR+ PDRV ++ ++ SG H+ +  RRTRSRA++A   G +A +STV+++TGG+WAVVV+ V+ LQEEGIFRTIV YL
Sbjct:  137 TLRSTQFKCPATHAAALEGHVEILRAIIEHGADVDAVDAQQRTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNSLLTPLMKAGRQAGRQGAAEVVNSLLRAGADETIANVQGNKAVDMIGEDVEEEDRLTEDVERVRELLANAPADRAWRRRGYLIMCRAQPDRVPER-RMTSGTHYTNVARRTRSRAKMARARG-IAGESTVDESTGGNWAVVVSKVISLQEEGIFRTIVEYL 400

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BLAST of mRNA_L-elsbetiae_contig696.15735.1 vs. uniprot
Match: A0A6H5JHY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHY9_9PHAE)

HSP 1 Score: 125 bits (315), Expect = 8.230e-28
Identity = 107/302 (35.43%), Postives = 134/302 (44.37%), Query Frame = 3

Query:   12 TPLYLAASQGHVAATVALLAAGADVSLRFSPLKVPVIHMATNPGYETTLGALIEHGADVEAENGTQETTLHAAAWFNNAEAIDVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLILAASKAGTQGAAEVVDYLLRAGADETIVKNDGRKASDVIGAAVEEEDRLADDIQRVRKLLANAPADRAWRRRGYLVLCRSH-PDRVQQKNQVISGAHHIDAGRRTRSRAELAMVIGEVARDSTVNQNTGGDWAVVVTNVL-------QLQEEG---IFRTIVGYL 884
            TPL+L A  G  AA  ALL AGADV+LR + + +                    HG DV A+     T L  A+ F+ A AIDV                                                   L L A+KAG+ G AE+VD LLR GADET V  +G  A+D++    EE D LA+D+ RVRKLLA APADRAWRRRG+L+L R+H P    Q     S A      +RTRS  E +    E+            DWA VV+ ++        L  +G   IF  IVGYL
Sbjct:  492 TPLHLVAMAGRAAAAQALLDAGADVALRQNGVGLSSXXXXXXXXXXXXXXXXXXHGGDVNAKVNNGITALRVASAFDKAPAIDVLTEAGANIEAQANGSTPLHVASQEGRLAAGIALLRHGASVGKKNAAAQTP-LHLVAAKAGSPGTAEMVDLLLRRGADETAVSENGHTAADMVVLKTEESDSLAEDVDRVRKLLARAPADRAWRRRGFLILSRAHYPGGRVQFGHRTSQAPAAGVAKRTRSSEEPSRA--EI------------DWAGVVSMLMGDGVDPISLMGDGANLIFEKIVGYL 778

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BLAST of mRNA_L-elsbetiae_contig696.15735.1 vs. uniprot
Match: D7FKL4_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKL4_ECTSI)

HSP 1 Score: 119 bits (299), Expect = 8.950e-27
Identity = 90/272 (33.09%), Postives = 117/272 (43.01%), Query Frame = 3

Query:   78 ADVSLRFSPLKVPVIHMATNPGYETTLGALIEHGADVEAENGTQETTLHAAAWFNNAEAIDVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---LILAASKAGTQGAAEVVDYLLRAGADETIVKNDGRKASDVIGAAVEEEDRLADDIQRVRKLLANAPADRAWRRRGYLVLCRSHPDRVQQKNQVISGAHHIDAGRRTRSRAELAMVIGEVARDSTVNQNTGGDWAVVVTNVLQLQEEGIFRTIVGYL 884
            AD++ R+   ++  + +    G+   +  LIEHGADV+A N      LH A   N  EA+DV                                                      L   A++AG QG  EVVD LLR GADET V  +G +A+D IG  V EEDR+ ++ + VRKLLANAPADRAWRRR  LVLCR+ PD++Q  +  I                                       A +   VL L EEGIFRTIV ++
Sbjct:  150 ADINRRYGDREISALDIGAGEGHVDFIRTLIEHGADVDATNYGGVAALHHATANNKVEAMDVLLRAGANARSMSESGHTVLHMAAITRTRTEAATLAVLLKHGADVNAQTVGGTSVLEYVATRAGKQGIVEVVDLLLRWGADETHVAGNGMRAADAIGMKVPEEDRIPEEFEGVRKLLANAPADRAWRRRCSLVLCRARPDKMQLSSDRI---------------------------------------ARLEARVLGLVEEGIFRTIVRFI 382

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BLAST of mRNA_L-elsbetiae_contig696.15735.1 vs. uniprot
Match: D7FYD0_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYD0_ECTSI)

HSP 1 Score: 119 bits (299), Expect = 1.580e-26
Identity = 75/156 (48.08%), Postives = 98/156 (62.82%), Query Frame = 3

Query:  426 AASKAGTQGAAEVVDYLLRAGADETIVKNDGRKASDVIGAAVEEED-RLADDIQRVRKLLANAPADRAWRRRGYLVLCRSHPDRVQQKNQVISGAHHIDAGRRTRSRAELAM--VIGEVARDSTVNQNTGGDWAVVVTNVLQLQEEGIFRTIVGYL 884
            AAS AG QG+AE+VD LLR GADET    +G++ +D +G  +E  D  L  ++  V +LLANAPADRAWRRRG LVLCR+   R + + Q   G       RRTRSRA+LA    +G   R  T    TG +W      V++L+EEGIFR++VG+L
Sbjct:  268 AASYAGRQGSAELVDLLLRRGADETTPDRNGQQPADRVGHCMELGDVLLGHEVVLVHELLANAPADRAWRRRGLLVLCRAWLRRSRLR-QEDGGDTRGGLSRRTRSRAKLARSDAVGAGCRRGTPEGGTGDEWRSASKRVVELEEEGIFRSVVGFL 422

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BLAST of mRNA_L-elsbetiae_contig696.15735.1 vs. uniprot
Match: D7G6X8_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6X8_ECTSI)

HSP 1 Score: 118 bits (296), Expect = 5.480e-26
Identity = 89/256 (34.77%), Postives = 117/256 (45.70%), Query Frame = 3

Query:   12 TPLYLAASQGHVAATVALLAAGADVSLRFS--PLKVPVIHMATNPGYETTLGALIEHGADVEAENGTQETTLHAAAWFNNAEAIDVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLILAASKAGTQGAAEVVDYLLRAGADETIVKNDGRKASDVIGAAVEEE--DRLADDIQRVRKLLANAPADRAWRRRGYLVLCRSHPDRVQQKNQVISGAHHIDAGRRTRSRAELAMVIG 767
            TPL+LA   GH++   ALLAA  D S+R+        V+ +A   G    L A+++HG DV        T+LH AA  N   AIDV                                                   LI+AA +AG QG   +VD LLR GADET +  DGR A++V+G  +E         D++RVR LL NAP DRAWRRRG+LVLCR+   + ++     S A     G R RS +  A + G
Sbjct:   73 TPLHLAVENGHLSTVKALLAADPDTSVRYRIWNRSYSVLDLAAQKGDACVLRAILQHGVDVNRRTDGY-TSLHVAALNNRVAAIDVLVEAGAHVEVEDDDDCTPFLDACINHCHEAALALYKHGSNIEARDIRGETPLIIAARQAGRQGVTAIVDMLLRCGADETALNPDGRTAAEVVGHHIEYAACPLNKQDVERVRDLLENAPVDRAWRRRGFLVLCRAFWIKARRLRAASSNAS--SNGPRVRSLSTGARISG 325

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BLAST of mRNA_L-elsbetiae_contig696.15735.1 vs. uniprot
Match: A0A6H5KNU3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNU3_9PHAE)

HSP 1 Score: 114 bits (284), Expect = 3.200e-24
Identity = 84/239 (35.15%), Postives = 108/239 (45.19%), Query Frame = 3

Query:   12 TPLYLAASQGHVAATVALLAAGADVSLRFS--PLKVPVIHMATNPGYETTLGALIEHGADVEAENGTQETTLHAAAWFNNAEAIDVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLILAASKAGTQGAAEVVDYLLRAGADETIVKNDGRKASDVIGAAVEEE--DRLADDIQRVRKLLANAPADRAWRRRGYLVLCRSHPDRVQQKNQVISGAHHI 716
            TPL+LA   GH++   ALLAA  D S+ +        V+  A   G    L A+++HG DV        T+LH AA  N   AIDV                                                   LI+AA +AG QG   +VD LLR GADET +  DGR A++V+G  +E         D++RVR LL NAPADRAWRRRG LVLCR+   + ++     S A  I
Sbjct:  122 TPLHLAVENGHLSTVKALLAADPDTSVHYRIWNRSYSVLDFAAQKGDACVLRAILQHGVDVNRRTDGY-TSLHVAALNNRVAAIDVLVEAGAHVEVEDDDDCTPFLDACSNHCHEAALALFKHGANIEARDMRGETPLIIAARQAGRQGVTAIVDMLLRCGADETALNPDGRTAAEVVGHHIEYAACPLNKQDLERVRDLLENAPADRAWRRRGLLVLCRAFWIKSRRLRAASSSARGI 359

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BLAST of mRNA_L-elsbetiae_contig696.15735.1 vs. uniprot
Match: D7G981_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G981_ECTSI)

HSP 1 Score: 107 bits (268), Expect = 2.150e-22
Identity = 70/152 (46.05%), Postives = 88/152 (57.89%), Query Frame = 3

Query:  438 AGTQGAAEVVDYLLRAGADETIVKNDGRKASDVIGAAVEEEDRLADDIQRVRKLLANAPADRAWRRRGYLVLCRSHPDRVQQKNQVISGAHHIDAGRRTRSRAELA---MVIGEVARDSTVNQNTGGDWAVVVTNVLQLQEEGIFRTIVGYL 884
            AG +GA EVVD LLR  ADET     G    +++G    E D +  ++QRV KLL  AP DRAWRRRG LVLCR+HP+R+  + Q  S        R TRSR +L     V G     +  +  T  +W+ +V  VL L +EGIFRTIVGYL
Sbjct:  250 AGDEGAVEVVDLLLRWNADETDDDAYGHTPGNIVGCMTPETDSMFVNVQRVWKLLQYAPQDRAWRRRGMLVLCRAHPERLGLR-QNASHVQESTVLRVTRSRTKLVEREQVAGGSGEGAAADGRTAREWSNMVYRVLGL-DEGIFRTIVGYL 399

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BLAST of mRNA_L-elsbetiae_contig696.15735.1 vs. uniprot
Match: A0A6H5JMJ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMJ6_9PHAE)

HSP 1 Score: 94.4 bits (233), Expect = 3.910e-19
Identity = 113/174 (64.94%), Postives = 127/174 (72.99%), Query Frame = 3

Query:  156 LGALIEHGADVEAENGTQETTLHAAAWFNNAEAIDVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLILAASKAGTQGAAEVVDYLLRAGADETIVKNDGRKASDVIGAAVEEEDRLADDIQRVRKLLANAPADRAWRRRGYLVLCRSHPDRV 677
            + A IE GA+V+A +  + T  H AA  NN E IDV  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   A + AG +G  EVVD LLR+GADETI+ ++GR A D+I   V       +   RVR LL NA ADRAW RR YLVLCR+HPDR 
Sbjct:    1 MSAAIERGAEVDAADAVERTPPHHAALLNNVEEIDVLVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSATAVAGFEGDTEVVDSLLRSGADETILDSEGRAAVDMISWEVAGLHLSGEQDDRVRDLLVNAQADRAWHRRRYLVLCRTHPDRA 174

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BLAST of mRNA_L-elsbetiae_contig696.15735.1 vs. uniprot
Match: D7G1U1_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1U1_ECTSI)

HSP 1 Score: 92.0 bits (227), Expect = 6.400e-17
Identity = 64/145 (44.14%), Postives = 73/145 (50.34%), Query Frame = 3

Query:  450 GAAEVVDYLLRAGADETIVKNDGRKASDVIGAAVEEEDRLADDIQRVRKLLANAPADRAWRRRGYLVLCRSHPDRVQQKNQVISGAHHIDAGRRTRSRAELAMVIGEVARDSTVNQNTGGDWAVVVTNVLQLQEEGIFRTIVGYL 884
            G+A+VVD LLR GADETIV   G  A+D IG          DD +R R LLA APADRAWRRRG LVLCR+HPDR+Q                                         GGD A +V  V  L+E G+FRTIV YL
Sbjct:  288 GSAQVVDLLLRWGADETIVSKQGETAADSIGTRRCHRTDPEDD-ERARSLLARAPADRAWRRRGLLVLCRAHPDRLQ----------------------------------------LGGDLAGLVAGVGGLEEVGVFRTIVLYL 391

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BLAST of mRNA_L-elsbetiae_contig696.15735.1 vs. uniprot
Match: A0A6H5JFR1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFR1_9PHAE)

HSP 1 Score: 88.2 bits (217), Expect = 3.060e-16
Identity = 102/249 (40.96%), Postives = 141/249 (56.63%), Query Frame = 3

Query:    6 QATPLYLAASQGHVAATVALLAAGADVSLRFSPLKVPVIHMATNPGYETTLGALIEHGADVEAENGTQETTLHAAAWFNNAEAIDVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLILAASKAGTQGAAEVVDYLLRAGADETIVKNDGRKASDVIGAAVEEEDRLADDIQRVRKLLANAPADRAWRRRGYLVLCRSHPDRVQQKNQVISGAHHIDAGRRTRSRAEL 752
            + TPL+ A   GH+ +  AL+AAGA++++R    K  V+ +A   G    L AL+++GADV A +  ++  LH             XXXXXXXXXXXXXXXXXXXXXXXXXXX                         ++A SK   + +A VVD LLR GA ETIV    + A+ ++  +         D +RV KLL NAPADRAWRRRG+L+LCR++P+RV  +  + S +  +DA R T + A++
Sbjct:   43 ECTPLFGALLFGHLTSARALMAAGAEINVRCGLSKRTVLSLAAEKGDVDILRALVKNGADVTAVDNDRDMALHVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDQA----------------------VVALSKRARRTSA-VVDLLLRLGAHETIVDKRKKNAAGLLKKSWWS-CLYPGDAERVYKLLRNAPADRAWRRRGFLLLCRAYPERVPPR--LDSSSTLVDAARTTHNEAKV 265

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig696.15735.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig696.15735.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5KXK5_9PHAE	3.080e-56	60.90	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JHY9_9PHAE	8.230e-28	35.43	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7FKL4_ECTSI	8.950e-27	33.09	Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=28...	[more]
D7FYD0_ECTSI	1.580e-26	48.08	Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=28...	[more]
D7G6X8_ECTSI	5.480e-26	34.77	Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo...	[more]
A0A6H5KNU3_9PHAE	3.200e-24	35.15	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7G981_ECTSI	2.150e-22	46.05	Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus si...	[more]
A0A6H5JMJ6_9PHAE	3.910e-19	64.94	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7G1U1_ECTSI	6.400e-17	44.14	Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo...	[more]
A0A6H5JFR1_9PHAE	3.060e-16	40.96	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig696	contig	L-elsbetiae_contig696:16902..18480 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Seed ortholog score	121.7
Seed ortholog evalue	4.9e-25
Seed eggNOG ortholog	2880.D7FYD0
KEGG ko	ko:K21440
Hectar predicted targeting category	other localisation
GOs	GO:0001508,GO:0002027,GO:0002262,GO:0002376,GO:0002520,GO:0003008,GO:0003012,GO:0003013,GO:0003015,GO:0003205,GO:0003230,GO:0003279,GO:0003283,GO:0003674,GO:0005198,GO:0005200,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005783,GO:0005829,GO:0005856,GO:0005886,GO:0005911,GO:0005938,GO:0006725,GO:0006778,GO:0006779,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006816,GO:0006873,GO:0006874,GO:0006875,GO:0006887,GO:0006888,GO:0006928,GO:0006936,GO:0006937,GO:0006941,GO:0006942,GO:0006996,GO:0007009,GO:0007010,GO:0007154,GO:0007163,GO:0007165,GO:0007267,GO:0007275,GO:0007507,GO:0008015,GO:0008016,GO:0008092,GO:0008093,GO:0008104,GO:0008150,GO:0008152,GO:0009058,GO:0009893,GO:0009987,GO:0010256,GO:0010468,GO:0010522,GO:0010604,GO:0010628,GO:0010638,GO:0010646,GO:0010880,GO:0010881,GO:0010882,GO:0010959,GO:0012505,GO:0014704,GO:0014731,GO:0015672,GO:0016020,GO:0016043,GO:0016192,GO:0016323,GO:0016528,GO:0016529,GO:0018130,GO:0019222,GO:0019438,GO:0019722,GO:0019725,GO:0019899,GO:0019900,GO:0019901,GO:0019932,GO:0022898,GO:0023051,GO:0023052,GO:0030001,GO:0030003,GO:0030011,GO:0030016,GO:0030017,GO:0030018,GO:0030029,GO:0030048,GO:0030054,GO:0030097,GO:0030099,GO:0030154,GO:0030218,GO:0030315,GO:0030424,GO:0030507,GO:0030673,GO:0030674,GO:0030863,GO:0031252,GO:0031253,GO:0031256,GO:0031430,GO:0031647,GO:0031672,GO:0031674,GO:0032409,GO:0032411,GO:0032412,GO:0032414,GO:0032501,GO:0032502,GO:0032589,GO:0032879,GO:0032940,GO:0032970,GO:0033013,GO:0033014,GO:0033036,GO:0033043,GO:0033267,GO:0033292,GO:0033365,GO:0034101,GO:0034394,GO:0034613,GO:0034641,GO:0034762,GO:0034764,GO:0034765,GO:0034767,GO:0035088,GO:0035090,GO:0035556,GO:0035637,GO:0036309,GO:0036371,GO:0042383,GO:0042391,GO:0042592,GO:0042692,GO:0042995,GO:0043005,GO:0043034,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043266,GO:0043268,GO:0043269,GO:0043270,GO:0043292,GO:0044057,GO:0044093,GO:0044237,GO:0044249,GO:0044271,GO:0044291,GO:0044304,GO:0044325,GO:0044422,GO:0044424,GO:0044425,GO:0044444,GO:0044448,GO:0044449,GO:0044456,GO:0044459,GO:0044463,GO:0044464,GO:0045197,GO:0045199,GO:0045202,GO:0045211,GO:0046483,GO:0046903,GO:0046907,GO:0048193,GO:0048468,GO:0048513,GO:0048518,GO:0048522,GO:0048534,GO:0048731,GO:0048821,GO:0048856,GO:0048869,GO:0048872,GO:0048878,GO:0050789,GO:0050794,GO:0050801,GO:0050821,GO:0050896,GO:0051049,GO:0051050,GO:0051117,GO:0051128,GO:0051130,GO:0051179,GO:0051186,GO:0051188,GO:0051234,GO:0051239,GO:0051270,GO:0051279,GO:0051282,GO:0051641,GO:0051649,GO:0051716,GO:0051899,GO:0051924,GO:0051928,GO:0055001,GO:0055065,GO:0055072,GO:0055074,GO:0055076,GO:0055080,GO:0055082,GO:0055117,GO:0060047,GO:0060048,GO:0060090,GO:0060255,GO:0060306,GO:0060307,GO:0060341,GO:0061024,GO:0061061,GO:0061245,GO:0061337,GO:0061515,GO:0065007,GO:0065008,GO:0065009,GO:0070252,GO:0070296,GO:0070727,GO:0070838,GO:0070972,GO:0071704,GO:0071840,GO:0071944,GO:0072359,GO:0072503,GO:0072507,GO:0072511,GO:0072657,GO:0072659,GO:0086001,GO:0086002,GO:0086003,GO:0086004,GO:0086005,GO:0086010,GO:0086012,GO:0086014,GO:0086015,GO:0086018,GO:0086019,GO:0086026,GO:0086046,GO:0086065,GO:0086066,GO:0086070,GO:0086091,GO:0090257,GO:0097060,GO:0097458,GO:0098590,GO:0098771,GO:0098794,GO:0098900,GO:0098901,GO:0098907,GO:0098910,GO:0099080,GO:0099081,GO:0099512,GO:0099568,GO:0099623,GO:0120025,GO:0120038,GO:1901016,GO:1901018,GO:1901019,GO:1901021,GO:1901360,GO:1901362,GO:1901379,GO:1901381,GO:1901564,GO:1901566,GO:1901576,GO:1903115,GO:1903169,GO:1903522,GO:1903779,GO:1904062,GO:1904064,GO:1904427,GO:1990778,GO:2001257,GO:2001259
EggNOG free text desc.	response to abiotic stimulus
EggNOG OGs	COG0666@1,KOG4177@2759
COG Functional cat.	G
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA
BRITE	ko00000,ko04131
Exons	2
Model size	1155
Cds size	762
Stop	1
Start	1

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig696.15735.1	prot_L-elsbetiae_contig696.15735.1	Laminarionema elsbetiae ELsaHSoW15	polypeptide	L-elsbetiae_contig696 17027..17788 +

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622816771.2991042-UTR-L-elsbetiae_contig696:16901..17026	1622816771.2991042-UTR-L-elsbetiae_contig696:16901..17026	Laminarionema elsbetiae ELsaHSoW15	UTR	L-elsbetiae_contig696 16902..17026 +
1691683800.927508-UTR-L-elsbetiae_contig696:16901..17026	1691683800.927508-UTR-L-elsbetiae_contig696:16901..17026	Laminarionema elsbetiae ELsaHSoW15	UTR	L-elsbetiae_contig696 16902..17026 +
1622816771.3286545-UTR-L-elsbetiae_contig696:17788..17793	1622816771.3286545-UTR-L-elsbetiae_contig696:17788..17793	Laminarionema elsbetiae ELsaHSoW15	UTR	L-elsbetiae_contig696 17789..17793 +
1691683800.9588926-UTR-L-elsbetiae_contig696:17788..17793	1691683800.9588926-UTR-L-elsbetiae_contig696:17788..17793	Laminarionema elsbetiae ELsaHSoW15	UTR	L-elsbetiae_contig696 17789..17793 +
1622816771.3385162-UTR-L-elsbetiae_contig696:18217..18480	1622816771.3385162-UTR-L-elsbetiae_contig696:18217..18480	Laminarionema elsbetiae ELsaHSoW15	UTR	L-elsbetiae_contig696 18218..18480 +
1691683800.9689677-UTR-L-elsbetiae_contig696:18217..18480	1691683800.9689677-UTR-L-elsbetiae_contig696:18217..18480	Laminarionema elsbetiae ELsaHSoW15	UTR	L-elsbetiae_contig696 18218..18480 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622816771.317373-CDS-L-elsbetiae_contig696:17026..17788	1622816771.317373-CDS-L-elsbetiae_contig696:17026..17788	Laminarionema elsbetiae ELsaHSoW15	CDS	L-elsbetiae_contig696 17027..17788 +
1691683800.948462-CDS-L-elsbetiae_contig696:17026..17788	1691683800.948462-CDS-L-elsbetiae_contig696:17026..17788	Laminarionema elsbetiae ELsaHSoW15	CDS	L-elsbetiae_contig696 17027..17788 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at L-elsbetiae_contig696:16902..18480+
coding sequence from alignment at L-elsbetiae_contig696:16902..18480+

protein sequence of mRNA_L-elsbetiae_contig696.15735.1

>prot_L-elsbetiae_contig696.15735.1 ID=prot_L-elsbetiae_contig696.15735.1|Name=mRNA_L-elsbetiae_contig696.15735.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=254bp
MATNPGYETTLGALIEHGADVEAENGTQETTLHAAAWFNNAEAIDVLVRA
GANIEACNHRGRTPFHLASGGLKRDVLPCLLKHGATVDAQDGFLQTPLIL
AASKAGTQGAAEVVDYLLRAGADETIVKNDGRKASDVIGAAVEEEDRLAD
DIQRVRKLLANAPADRAWRRRGYLVLCRSHPDRVQQKNQVISGAHHIDAG
RRTRSRAELAMVIGEVARDSTVNQNTGGDWAVVVTNVLQLQEEGIFRTIV
GYL*

mRNA from alignment at L-elsbetiae_contig696:16902..18480+

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_L-elsbetiae_contig696.15735.1 ID=mRNA_L-elsbetiae_contig696.15735.1|Name=mRNA_L-elsbetiae_contig696.15735.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1579bp|location=Sequence derived from alignment at L-elsbetiae_contig696:16902..18480+ (Laminarionema elsbetiae ELsaHSoW15)
ACGAGCAAGCGACGCCGCTGTATCTAGCAGCCTCCCAGGGTCACGTGGCT
GCCACAGTGGCTCTCTTGGCTGCCGGCGCGGATGTCAGCCTCCGATTCAG
CCCGCTCAAGGTCCCAGTGATACACATGGCGACAAACCCGGGGTATGAGA
CGACCTTGGGGGCCTTGATCGAGCACGGGGCGGACGTGGAAGCTGAAAAC
GGAACACAAGAAACAACTCTTCATGCAGCCGCGTGGTTCAATAACGCCGA
GGCCATCGATGTGCTCGTCAGGGCTGGAGCCAACATCGAAGCATGCAATC
ATCGCGGCCGCACACCTTTTCATCTTGCTTCCGGTGGTCTCAAACGCGAC
GTCTTACCTTGCCTTTTGAAGCATGGTGCGACCGTTGACGCCCAGGATGG
TTTCCTCCAAACACCGTTGATACTTGCAGCATCTAAAGCCGGAACACAAG
GAGCTGCGGAGGTGGTGGATTATCTGCTGAGGGCGGGTGCGGACGAAACA
ATCGTTAAGAATGATGGCCGCAAAGCGTCCGATGTGATCGGGGCAGCTGT
CGAAGAAGAGGATCGTCTGGCCGATGATATCCAGCGCGTGCGCAAGCTGT
TGGCCAACGCTCCGGCCGACAGGGCATGGCGTCGCCGAGGCTACCTGGTG
TTGTGCCGTTCTCACCCGGACAGGGTGCAGCAGAAGAACCAGGTGATCAG
CGGCGCCCATCATATCGACGCAGGACGAAGGACTCGCAGCCGTGCCGAGC
TGGCGATGGTAATAGGGGAGGTCGCTAGGGACAGCACAGTGAATCAGAAT
ACCGGTGGCGACTGGGCTGTTGTCGTGACTAATGTGCTGCAGTTGCAGGA
GGAGGGCATATTCCGGACGATCGTGGGGTACCTCTGAAGCCGGTGAGTTG
AACCTGTGCAGCCATCCACCATACCATCGAGCATCACACTCAAACGACAA
GGTATGCCTTGGTTTCGAACAACCATGCGGTAGTGTGATAAAACTACAGA
TACCTCTTTATTTGTCGCGTTTTCCAAGGGGTGACAGCAGTTGTGCATCA
TATCAGGTGGGTTATTGTTGAGTTGTTTGGGGCTGGGTGCACCATTGGTT
CCTATGAATACTGCTCTCTCTGAGCTTGGGTCTCTCTGCAAATCGCAGGA
AGGGGCGGCGTAGAAGGTTGTTGTCGCTATATGAAGTGCTTTGGTGCCAC
CCGCTCATCATTGGTTTCCTAGAAGCCTCGATTTGTTGTAAATGGAACAG
CTTTGATTACTCGTCCATTCCGACCAGGCCTGAATTTGTTTTTGCTTGTC
CCCTCCCAAACACCAGGTCGATTGTTCAAGAACCCGAAAGCATCGATCAT
CTTGGTCCACGTAGGGTTAGATGCCATGGGCCTGACAAATGCCCGGTATA
CTTGAATATGTTCTGCCCCCCACCGGCTGAACCCCCCCATTAAAGGTGGA
AAGAAGACTGTTCGGGTATCGCTGAGGGTTCGGCGCTGTTTAGCAAAGAG
AAGAGGCGGTATGCGCTCGCCCAGGGGCAAGTGTGTGTGTGCGTGTGCCC
TTCCCATTTATTTTGGCGACAGTCCCCCC

Coding sequence (CDS) from alignment at L-elsbetiae_contig696:16902..18480+

>mRNA_L-elsbetiae_contig696.15735.1 ID=mRNA_L-elsbetiae_contig696.15735.1|Name=mRNA_L-elsbetiae_contig696.15735.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1524bp|location=Sequence derived from alignment at L-elsbetiae_contig696:16902..18480+ (Laminarionema elsbetiae ELsaHSoW15)
ATGGCGACAAACCCGGGGTATGAGACGACCTTGGGGGCCTTGATCGAGCA
CGGGGCGGACGTGGAAGCTGAAAACGGAACACAAGAAACAACTCTTCATG
CAGCCGCGTGGTTCAATAACGCCGAGGCCATCGATGTGCTCGTCAGGGCT
GGAGCCAACATCGAAGCATGCAATCATCGCGGCCGCACACCTTTTCATCT
TGCTTCCGGTGGTCTCAAACGCGACGTCTTACCTTGCCTTTTGAAGCATG
GTGCGACCGTTGACGCCCAGGATGGTTTCCTCCAAACACCGTTGATACTT
GCAGCATCTAAAGCCGGAACACAAGGAGCTGCGGAGGTGGTGGATTATCT
GCTGAGGGCGGGTGCGGACGAAACAATCGTTAAGAATGATGGCCGCAAAG
CGTCCGATGTGATCGGGGCAGCTGTCGAAGAAGAGGATCGTCTGGCCGAT
GATATCCAGCGCGTGCGCAAGCTGTTGGCCAACGCTCCGGCCGACAGGGC
ATGGCGTCGCCGAGGCTACCTGGTGTTGTGCCGTTCTCACCCGGACAGGG
TGCAGCAGAAGAACCAGGTGATCAGCGGCGCCCATCATATCGACGCAGGA
CGAAGGACTCGCAGCCGTGCCGAGCTGGCGATGGTAATAGGGGAGGTCGC
TAGGGACAGCACAGTGAATCAGAATACCGGTGGCGACTGGGCTGTTGTCG
TGACTAATGTGCTGCAGTTGCAGGAGGAGGGCATATTCCGGACGATCGTG
GGGTACCTCTGAATGGCGACAAACCCGGGGTATGAGACGACCTTGGGGGC
CTTGATCGAGCACGGGGCGGACGTGGAAGCTGAAAACGGAACACAAGAAA
CAACTCTTCATGCAGCCGCGTGGTTCAATAACGCCGAGGCCATCGATGTG
CTCGTCAGGGCTGGAGCCAACATCGAAGCATGCAATCATCGCGGCCGCAC
ACCTTTTCATCTTGCTTCCGGTGGTCTCAAACGCGACGTCTTACCTTGCC
TTTTGAAGCATGGTGCGACCGTTGACGCCCAGGATGGTTTCCTCCAAACA
CCGTTGATACTTGCAGCATCTAAAGCCGGAACACAAGGAGCTGCGGAGGT
GGTGGATTATCTGCTGAGGGCGGGTGCGGACGAAACAATCGTTAAGAATG
ATGGCCGCAAAGCGTCCGATGTGATCGGGGCAGCTGTCGAAGAAGAGGAT
CGTCTGGCCGATGATATCCAGCGCGTGCGCAAGCTGTTGGCCAACGCTCC
GGCCGACAGGGCATGGCGTCGCCGAGGCTACCTGGTGTTGTGCCGTTCTC
ACCCGGACAGGGTGCAGCAGAAGAACCAGGTGATCAGCGGCGCCCATCAT
ATCGACGCAGGACGAAGGACTCGCAGCCGTGCCGAGCTGGCGATGGTAAT
AGGGGAGGTCGCTAGGGACAGCACAGTGAATCAGAATACCGGTGGCGACT
GGGCTGTTGTCGTGACTAATGTGCTGCAGTTGCAGGAGGAGGGCATATTC
CGGACGATCGTGGGGTACCTCTGA