mRNA_L-elsbetiae_contig6952.15725.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig6952.15725.1 vs. uniprot
Match: D8LTS5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTS5_ECTSI) HSP 1 Score: 181 bits (458), Expect = 5.510e-49 Identity = 106/169 (62.72%), Postives = 122/169 (72.19%), Query Frame = 1 Query: 4 GAAAAAVTIGVFSVSGMSCASCVGNVERFVSGMDGVEDVRVALLAEKAEVRFDPELSSGRDLADGITGLGYPTRLLSSTVLSGDXXXXXXXXXXXXGDRDVTLEVLGVSGPEGVSSLEGAVSALAGIASCTVSRLPSTAASGASGDADGGGINGYHSSGAPLYLLVAKR 510 GA V +GVFSVSGMSCASCVGNVE+FVS +DGV+DVRVALLAEKAEVRFDP ++G++LADGITGLGYPTR LSSTVL+G G D+T+EV GVSGPE VS+LE V AL G+ASC V+R PST +G G GG NG S GAP Y+L A R Sbjct: 365 GAGGGEVAVGVFSVSGMSCASCVGNVEKFVSALDGVDDVRVALLAEKAEVRFDPGTTNGQELADGITGLGYPTRHLSSTVLTG---AGAAGGKGVPGASDITVEVFGVSGPESVSNLETTVLALPGVASCKVTR-PSTPGAGDGGTPRGGSYNG--SGGAPAYVLTATR 527
BLAST of mRNA_L-elsbetiae_contig6952.15725.1 vs. uniprot
Match: D8LTL7_ECTSI (Heavy metal translocating P-type ATPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTL7_ECTSI) HSP 1 Score: 90.9 bits (224), Expect = 1.220e-17 Identity = 66/144 (45.83%), Postives = 87/144 (60.42%), Query Frame = 1 Query: 22 VTIGVFSVSGMSCASCVGNVERFVSGMDGVEDVRVALLAEKAEVRFDPELSSGRDLADGITGLGYPTRLLSSTVLSGDXXXXXXXXXXXXGDRDVTLEVLGVSGPEGVSSLEGAVSALAGIASCTVSRLPSTAASGASGDADGG 453 ++ G F+V GMSCA+CVG VERFV M GV +VRVALLA +AEV++D E + D+A G++GLGY + L + S XXXXXX + +EV G+S +E AV AL G+ASC+VS A+ GD GG Sbjct: 378 LSTGSFTVEGMSCAACVGKVERFVGAMRGVGEVRVALLAGQAEVKYDTEQLAPEDIARGVSGLGYKCQHLRTVRTS-----KAGXXXXXXRPNTLEVEVTGMSCTSCSGKVERAVLALPGVASCSVSVTTGRASITFKGDGSGG 516
BLAST of mRNA_L-elsbetiae_contig6952.15725.1 vs. uniprot
Match: A0A7E5W3V5_TRINI (P-type Cu(+) transporter n=5 Tax=Trichoplusia ni TaxID=7111 RepID=A0A7E5W3V5_TRINI) HSP 1 Score: 79.7 bits (195), Expect = 8.630e-14 Identity = 48/124 (38.71%), Postives = 70/124 (56.45%), Query Frame = 1 Query: 43 VSGMSCASCVGNVERFVSGMDGVEDVRVALLAEKAEVRFDPELSSGRDLADGITGLGYPTRLLSSTVLSGDXXXXXXXXXXXXGDRDVTLEVLGVSGPEGVSSLEGAVSALAGIASCTVSRLPS 414 V GM+CASCV +E+ + + GV + VALLA KAEVR++P S D+AD IT LG+P+ +LS SG RD+ + + G++ V+ +E +V L G+ SCTV+ S Sbjct: 247 VRGMTCASCVAAIEKHCAKLYGVHSILVALLAAKAEVRYEPRKISASDVADSITELGFPSSVLSDCDASGQ--------------RDLQVLIKGMTCASCVNKIEKSVLKLTGVVSCTVALTTS 356
BLAST of mRNA_L-elsbetiae_contig6952.15725.1 vs. uniprot
Match: A0A194PYV7_PAPXU (P-type Cu(+) transporter n=8 Tax=Papilio TaxID=7145 RepID=A0A194PYV7_PAPXU) HSP 1 Score: 79.7 bits (195), Expect = 8.720e-14 Identity = 50/124 (40.32%), Postives = 70/124 (56.45%), Query Frame = 1 Query: 43 VSGMSCASCVGNVERFVSGMDGVEDVRVALLAEKAEVRFDPELSSGRDLADGITGLGYPTRLLSSTVLSGDXXXXXXXXXXXXGDRDVTLEVLGVSGPEGVSSLEGAVSALAGIASCTVSRLPS 414 V GM+CASCV +E+ S + GV+ V +ALLA KAEVR++P S D+A IT LG+P +LS GD G R++ L + G++ VS +E V L+G+ASC V+ S Sbjct: 242 VRGMTCASCVAAIEKHCSKIYGVQSVVIALLAAKAEVRYEPRKVSAPDIAQSITALGFPADVLSD----GDGC----------GQRELVLNIKGMTCASCVSKIEKTVLKLSGVASCAVALTTS 351
BLAST of mRNA_L-elsbetiae_contig6952.15725.1 vs. uniprot
Match: A0A6J1NEG0_BICAN (P-type Cu(+) transporter n=15 Tax=Satyrini TaxID=127320 RepID=A0A6J1NEG0_BICAN) HSP 1 Score: 76.6 bits (187), Expect = 9.680e-13 Identity = 45/119 (37.82%), Postives = 67/119 (56.30%), Query Frame = 1 Query: 43 VSGMSCASCVGNVERFVSGMDGVEDVRVALLAEKAEVRFDPELSSGRDLADGITGLGYPTRLLSSTVLSGDXXXXXXXXXXXXGDRDVTLEVLGVSGPEGVSSLEGAVSALAGIASCTV 399 V GM+CASCV +E+ S M GV + +ALLA KAEVR++P S +A+ IT LG+P+ L+S + +D+TL + G++ V+ +E AV L G+ SC+V Sbjct: 30 VRGMTCASCVAAIEKHCSKMHGVHSIVIALLAAKAEVRYEPAKVSAAAIAESITELGFPSELISDS----------------GAPKDLTLMIKGMTCASCVNKIEKAVLKLTGVVSCSV 132
BLAST of mRNA_L-elsbetiae_contig6952.15725.1 vs. uniprot
Match: A0A836CEY3_9STRA (Putative copper-transporting ATPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEY3_9STRA) HSP 1 Score: 76.6 bits (187), Expect = 9.970e-13 Identity = 55/148 (37.16%), Postives = 75/148 (50.68%), Query Frame = 1 Query: 16 AAVTIGVFSVSGMSCASCVGNVERFVSGMDGVEDVRVALLAEKAEVRFDPELSSGRDLADGITGLGYPTRLLSSTVLSGDXXXXXXXXXXXXGDRDVTLEVLGVSGPEGVSSLEGAVSALAGIASCTVSRLPSTAASGASGDADGGGI 459 A +GVFSVSGM+CA+CV VER + GV VRVALLAEKAEV F+P + LA +T LGY R L T+ +G + VT+ L + +E A+ L G+ + +S +TA G +GG + Sbjct: 254 AGCALGVFSVSGMTCAACVAKVERHLRAQPGVRGVRVALLAEKAEVDFEPGAVAEAALAAAVTDLGYAARHLR-TIAAGAPAGLR--------ELSVTIPALSTEA-DAAQRVEAALRGLRGVTAVNLSVAAATATVGVDTGKEGGAV 391
BLAST of mRNA_L-elsbetiae_contig6952.15725.1 vs. uniprot
Match: A0A8H7ZUD3_9FUNG (Heavy metal-associated domain-containing protein n=1 Tax=Olpidium bornovanus TaxID=278681 RepID=A0A8H7ZUD3_9FUNG) HSP 1 Score: 76.3 bits (186), Expect = 1.250e-12 Identity = 48/121 (39.67%), Postives = 66/121 (54.55%), Query Frame = 1 Query: 37 FSVSGMSCASCVGNVERFVSGMDGVEDVRVALLAEKAEVRFDPELSSGRDLADGITGLGYPTRLLSSTVLSGDXXXXXXXXXXXXGDRDVTLEVLGVSGPEGVSSLEGAVSALAGIASCTV 399 + V GMSCASCV N+ER +S M GV+ + V+LLAE+A+V + P L S ++AD I LG+ L S + +TLEV G++ S+LE VS L G+ S TV Sbjct: 434 YEVHGMSCASCVANIERKISAMRGVDSIVVSLLAERADVHYQPSLVSQTEIADAIDSLGFSATALKSAK-----------------EGVITLEVYGLTDLGMASALEQHVSELDGVFSVTV 537
BLAST of mRNA_L-elsbetiae_contig6952.15725.1 vs. uniprot
Match: A0A7R9QD84_9ACAR (P-type Cu(+) transporter (Fragment) n=1 Tax=Oppiella nova TaxID=334625 RepID=A0A7R9QD84_9ACAR) HSP 1 Score: 75.1 bits (183), Expect = 3.270e-12 Identity = 44/123 (35.77%), Postives = 69/123 (56.10%), Query Frame = 1 Query: 34 VFSVSGMSCASCVGNVERFVSGMDGVEDVRVALLAEKAEVRFDPELSSGRDLADGITGLGYPTRLLSSTVLSGDXXXXXXXXXXXXGDRDVTLEVLGVSGPEGVSSLEGAVSALAGIASCTVS 402 V VSGM+CASCV N+ER +S ++G+E V VALL++KAE+R+D + +A+ +T LGYP+ ++ S S D ++ L + ++ V +E + LAG+ S VS Sbjct: 123 VLKVSGMTCASCVANIERNLSKVEGIEGVLVALLSQKAEIRYDAAYVMPQQIANIVTELGYPSTVIESYQTS---------------DGEIELRIQRMTCSSCVHKIESTIGKLAGVKSAVVS 230
BLAST of mRNA_L-elsbetiae_contig6952.15725.1 vs. uniprot
Match: A0A1S3JPJ4_LINUN (P-type Cu(+) transporter n=3 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3JPJ4_LINUN) HSP 1 Score: 75.1 bits (183), Expect = 3.420e-12 Identity = 35/70 (50.00%), Postives = 50/70 (71.43%), Query Frame = 1 Query: 34 VFSVSGMSCASCVGNVERFVSGMDGVEDVRVALLAEKAEVRFDPELSSGRDLADGITGLGYPTRLLSSTV 243 +F+V GM+CASCV N+ER ++ ++G+E + VALLA+KAEV +DPEL + +A IT LGY T +L Sbjct: 439 LFNVRGMTCASCVANIERTMAKVEGIETILVALLAQKAEVTYDPELLNPETIAKKITDLGYETTVLQEAT 508
BLAST of mRNA_L-elsbetiae_contig6952.15725.1 vs. uniprot
Match: A0A834XJL2_9HYME (P-type Cu(+) transporter n=6 Tax=Aphidius gifuensis TaxID=684658 RepID=A0A834XJL2_9HYME) HSP 1 Score: 73.6 bits (179), Expect = 1.150e-11 Identity = 43/120 (35.83%), Postives = 65/120 (54.17%), Query Frame = 1 Query: 43 VSGMSCASCVGNVERFVSGMDGVEDVRVALLAEKAEVRFDPELSSGRDLADGITGLGYPTRLLSSTVLSGDXXXXXXXXXXXXGDRDVTLEVLGVSGPEGVSSLEGAVSALAGIASCTVS 402 + GM+CASCV ++ER + GVE + VAL+A KAEV++ P+ D+ IT LG+PT L+ G+ +V LE+LG++ V +E +V L GI + T+S Sbjct: 276 IKGMTCASCVASIERHCKKLYGVESILVALMAAKAEVKYQPDKIRPIDIVSSITNLGFPTTLIDEI---------------GTGEANVELEILGMTCASCVDKIEKSVMQLNGIKTATIS 380 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6952.15725.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig6952.15725.1 >prot_L-elsbetiae_contig6952.15725.1 ID=prot_L-elsbetiae_contig6952.15725.1|Name=mRNA_L-elsbetiae_contig6952.15725.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=204bp KGAAAAAVTIGVFSVSGMSCASCVGNVERFVSGMDGVEDVRVALLAEKAEback to top mRNA from alignment at L-elsbetiae_contig6952:7261..10047+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig6952.15725.1 ID=mRNA_L-elsbetiae_contig6952.15725.1|Name=mRNA_L-elsbetiae_contig6952.15725.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2787bp|location=Sequence derived from alignment at L-elsbetiae_contig6952:7261..10047+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig6952:7261..10047+ >mRNA_L-elsbetiae_contig6952.15725.1 ID=mRNA_L-elsbetiae_contig6952.15725.1|Name=mRNA_L-elsbetiae_contig6952.15725.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1224bp|location=Sequence derived from alignment at L-elsbetiae_contig6952:7261..10047+ (Laminarionema elsbetiae ELsaHSoW15)back to top |