mRNA_L-elsbetiae_contig6952.15723.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig6952.15723.1 vs. uniprot
Match: D8LTS5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTS5_ECTSI) HSP 1 Score: 165 bits (418), Expect = 1.780e-43 Identity = 96/185 (51.89%), Postives = 111/185 (60.00%), Query Frame = 1 Query: 139 MMEPTSGDILSTGLAGDAATASLDRERVIAIDVDGMMCQKNCGGTVKRVIEAVPGVTRAEVSFVARRAWAWLSPAPGDGGGEGKRE-------------------------------EGAMTRVVVEAVEDVGFGADVSPDVELLVEGMMCQKNCGTTVRNALLASSPAVARAEASFAEGRARVW 600 MME S G +AA A+L ++ AIDV+GMMCQ NCG TVKR IEAVPGV+RAEVSF ARRAWAWLSP+ A+ ++EAVE VGFGA+ SPDVELLV GMMCQ+NCGTTVRNALL+ SP+ ARAEASF EGR R+W Sbjct: 2 MMESISNG----GTVANAAAAALGQDGPFAIDVEGMMCQNNCGSTVKRAIEAVPGVSRAEVSFAARRAWAWLSPSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAAVFAEILEAVEAVGFGAEASPDVELLVGGMMCQRNCGTTVRNALLSVSPSFARAEASFEEGRGRIW 182
BLAST of mRNA_L-elsbetiae_contig6952.15723.1 vs. uniprot
Match: D8LTL7_ECTSI (Heavy metal translocating P-type ATPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTL7_ECTSI) HSP 1 Score: 124 bits (312), Expect = 2.840e-29 Identity = 70/126 (55.56%), Postives = 83/126 (65.87%), Query Frame = 1 Query: 223 IAIDVDGMMCQKNCGGTVKRVIEAVPGVTRAEVSFVARRAWAWLSPAPGDGGGEGKREEGAMTRVVVEAVEDVGFGADVSPDVELLVEGMMCQKNCGTTVRNALLASSPAVARAEASFAEGRARVW 600 + ++V+GMMCQ+NCG TV+ + AV GV RAEVSF RRA WL+ G +V AVE VGFGA+V+P V L V GMMCQKNCGTTVR AL A P V+RAE SFA+ RARVW Sbjct: 79 VVLEVEGMMCQRNCGTTVQAALAAVAGVHRAEVSFADRRALVWLN--------------GGTEDALVAAVEGVGFGAEVAPAVLLAVGGMMCQKNCGTTVRQALEAV-PGVSRAEVSFAQKRARVW 189
BLAST of mRNA_L-elsbetiae_contig6952.15723.1 vs. uniprot
Match: A0A836CEY3_9STRA (Putative copper-transporting ATPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEY3_9STRA) HSP 1 Score: 121 bits (303), Expect = 4.500e-28 Identity = 69/151 (45.70%), Postives = 96/151 (63.58%), Query Frame = 1 Query: 157 GDILSTGLAGDAATASLDRERVIAIDVDGMMCQKNCGGTVKRVIEAVPGVTRAEVSFVARRAWAWLSPAPGDGGGEGKREEGAMTRVVVEAVEDVGFGADVSPDVELLVEGMMCQKNCGTTVRNALLASSPAVARAEASFAEGRARVWTAA 609 GD+LS+ +G A+ ++ + V+GMMCQKNCG TV + + +VPG RAEVSF R+A AW + A+ + +V+AVE VGF A V+PD+ + V GMMCQKNCG+TV+ AL A + V +AE SF +G+ARVW +A Sbjct: 5 GDLLSSAESGWASPPG-----IVTLHVEGMMCQKNCGSTVHKALMSVPGTVRAEVSFADRQARAWGT---------------AVAKALVDAVEGVGFDACVAPDITIDVVGMMCQKNCGSTVQKALAAVA-GVTKAEVSFKDGQARVWGSA 134
BLAST of mRNA_L-elsbetiae_contig6952.15723.1 vs. uniprot
Match: A0A7S2UWL7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWL7_9STRA) HSP 1 Score: 89.0 bits (219), Expect = 3.060e-19 Identity = 58/122 (47.54%), Postives = 70/122 (57.38%), Query Frame = 1 Query: 241 GMMCQKNCGGTVKRVIEAVPGVTRAEVSFVARRAWAWLSPAPGDGGGEGKREEGAMTRVVVEAVEDVGFG-ADVSPD-VELLVEGMMCQKNCGTTVRNALLASSPAVARAEASFAEGRARVW 600 GMMC KNCG T+K + AV GV EVS ++ A W + G G + A+ V EA E G A + P +EL VEGMMCQKNCGTTV AL +S+P V A+ SFAE A VW Sbjct: 1 GMMCMKNCGSTIKSALGAVNGVQHVEVSLESKWALVWSAHRVG-----GDQLRAAVEAVGFEAAEVSANGVAGICPQHLELEVEGMMCQKNCGTTVHKAL-SSTPGVVFAKVSFAESAAYVW 116
BLAST of mRNA_L-elsbetiae_contig6952.15723.1 vs. uniprot
Match: A0A2D4BDA3_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BDA3_PYTIN) HSP 1 Score: 94.4 bits (233), Expect = 8.760e-19 Identity = 61/137 (44.53%), Postives = 77/137 (56.20%), Query Frame = 1 Query: 220 VIAIDVDGMMCQKNCGGTVKRVIEAVPGVTRAEVSFVARRAWAWLSPAPGDGGGEGKREEGAMTRVVVEAVEDVGFGA--------DVSPD---VELLVEGMMCQKNCGTTVRNALLASSPAVARAEASFAEGRARV 597 V + ++GMMCQKNCG TV+ ++ VPGV +A V+F A +P E G +++AVE VGFGA S D +ELLVEGMMCQKNCGTTV+NAL S VA AE F + +A V Sbjct: 28 VYELVIEGMMCQKNCGTTVQNALKGVPGVDKAVVTFATHSARVTCAP-----------EAGVTPDELIDAVESVGFGAMLKAPAGGSTSSDPLVIELLVEGMMCQKNCGTTVQNALK-SVDGVASAEVVFDKRKATV 152
BLAST of mRNA_L-elsbetiae_contig6952.15723.1 vs. uniprot
Match: A0A5D6YX70_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YX70_9STRA) HSP 1 Score: 88.2 bits (217), Expect = 1.280e-16 Identity = 60/135 (44.44%), Postives = 77/135 (57.04%), Query Frame = 1 Query: 223 IAIDVDGMMCQKNCGGTVKRVIEAVPGVTRAEVSFVARRAWAWLSPAPGDGGGEGKREEGAMTRVVVEAVEDVGFGA------DVSPD----VELLVEGMMCQKNCGTTVRNALLASSPAVARAEASFAEGRARV 597 + + ++GMMC KNCG TV+ + AVPGV A VS + A +P G + + EE +++AVE VGFGA D SP+ V LLV+GMMCQKNCGTTV NAL S+ V A SF + A V Sbjct: 10 LELAIEGMMCMKNCGTTVQNALRAVPGVVSAVVSLDSHSARVQAAP-----GAQLRAEE------LIDAVEGVGFGAALLKGADASPEDPLVVRLLVDGMMCQKNCGTTVENALR-SADGVLTAVVSFEKRLATV 132
BLAST of mRNA_L-elsbetiae_contig6952.15723.1 vs. uniprot
Match: A0A7S3LGY6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3LGY6_9STRA) HSP 1 Score: 80.9 bits (198), Expect = 2.320e-16 Identity = 50/106 (47.17%), Postives = 59/106 (55.66%), Query Frame = 1 Query: 220 VIAIDVDGMMCQKNCGGTVKRVIEAVPGVTRAEVSFVARRAWAWLSPAPGDGGGEGKREEGAMTRVVVEAVEDVGFGADVS-PDVELLVEGMMCQKNCGTTVRNAL 534 +I + VDGMMCQKNCG TV + AVPGV VSF ++ +GK +V+AVE VGF A P +EL V GMMCQKNCG TV NAL Sbjct: 5 LIELTVDGMMCQKNCGTTVHNALTAVPGVKNVIVSFADKKTIV-----------KGKN---LNVDQLVDAVEAVGFDASQDLPVIELQVNGMMCQKNCGNTVYNAL 96
BLAST of mRNA_L-elsbetiae_contig6952.15723.1 vs. uniprot
Match: H3HCV5_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3HCV5_PHYRM) HSP 1 Score: 87.0 bits (214), Expect = 3.180e-16 Identity = 68/161 (42.24%), Postives = 78/161 (48.45%), Query Frame = 1 Query: 118 VSRSGRAMMEPTSGDILSTGLAGD-AATASLDRERVIAIDVDGMMCQKNCGGTVKRVIEAVPGVTRAEVSFVARRAWAWLSPAPGDGGGEGKREEGAMTRVVVEAVEDVGFGADVSPDVELLVEGMMCQKNCGTTVRNALLASSPAVARAEASFAEGRARV 597 VSRS A+ S A D A AS V+ + VDGMMC KNCG TV+ + +V GV A VSF R A P +V+AVE VGFGA LLVEGMMCQKNCG TV NAL VA A SF + +A V Sbjct: 346 VSRSLEAIAGSPSTSFPHLPPAADMVAAASQCDALVVELAVDGMMCMKNCGATVQTALRSVDGVASAVVSFERRSARVQCEPGAN-----------VTANDLVDAVECVGFGA------ALLVEGMMCQKNCGATVENALRGVD-GVAAAVVSFEQRKATV 488
BLAST of mRNA_L-elsbetiae_contig6952.15723.1 vs. uniprot
Match: A0A662Y8Q1_9STRA (Uncharacterized protein (Fragment) n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y8Q1_9STRA) HSP 1 Score: 83.2 bits (204), Expect = 6.830e-15 Identity = 51/118 (43.22%), Postives = 61/118 (51.69%), Query Frame = 1 Query: 220 VIAIDVDGMMCQKNCGGTVKRVIEAVPGVTRAEVSFVARRAWAWLSPAPGDGGGEGKREEGAMTRVVVEAVEDVGFGADVSP-------------DVELLVEGMMCQKNCGTTVRNAL 534 V+ + V+GMMC KNCG TV+ + +V GV A V F AR A P +V+AVE VGFGA V ++ LLVEGMMCQKNCGTTV NAL Sbjct: 2 VVELAVEGMMCMKNCGSTVQSALRSVDGVASAVVDFEARSARVECLPGAS-----------VTASDLVDAVECVGFGAAVKDTTTMKTERETNPLEIALLVEGMMCQKNCGTTVENAL 108
BLAST of mRNA_L-elsbetiae_contig6952.15723.1 vs. uniprot
Match: A0A8K1FHJ2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FHJ2_PYTOL) HSP 1 Score: 83.2 bits (204), Expect = 6.930e-15 Identity = 53/125 (42.40%), Postives = 69/125 (55.20%), Query Frame = 1 Query: 196 TASLDRERVIAIDVDGMMCQKNCGGTVKRVIEAVPGVTRAEVSFVARRAWAWLSPAPGDGGGEGKREEGAMTRVVVEAVEDVGFGADVSPD------------VELLVEGMMCQKNCGTTVRNAL 534 ++++ + V + ++GMMC KNCG TV+ + VPGV A VSF A + A G G + +V+AVE VGFGA V D +ELLVEGMMCQKNCG+TV NAL Sbjct: 17 SSNVHADAVFELAIEGMMCMKNCGTTVQSALRNVPGVISAVVSFETHSAR--VECAAGVTGDD-----------LVDAVECVGFGAVVKKDSLNATKPVDPLVIELLVEGMMCQKNCGSTVENAL 128 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6952.15723.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig6952.15723.1 >prot_L-elsbetiae_contig6952.15723.1 ID=prot_L-elsbetiae_contig6952.15723.1|Name=mRNA_L-elsbetiae_contig6952.15723.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=167bp MMEPTSGDILSTGLAGDAATASLDRERVIAIDVDGMMCQKNCGGTVKRVIback to top mRNA from alignment at L-elsbetiae_contig6952:3447..6762+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig6952.15723.1 ID=mRNA_L-elsbetiae_contig6952.15723.1|Name=mRNA_L-elsbetiae_contig6952.15723.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3316bp|location=Sequence derived from alignment at L-elsbetiae_contig6952:3447..6762+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig6952:3447..6762+ >mRNA_L-elsbetiae_contig6952.15723.1 ID=mRNA_L-elsbetiae_contig6952.15723.1|Name=mRNA_L-elsbetiae_contig6952.15723.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1002bp|location=Sequence derived from alignment at L-elsbetiae_contig6952:3447..6762+ (Laminarionema elsbetiae ELsaHSoW15)back to top |