prot_L-elsbetiae_contig1182.1571.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1182.1571.1
Unique Nameprot_L-elsbetiae_contig1182.1571.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length99
Homology
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BLAST of mRNA_L-elsbetiae_contig1182.1571.1 vs. uniprot
Match: A0A6H5JH06_9PHAE (WW domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH06_9PHAE)

HSP 1 Score: 157 bits (397), Expect = 1.510e-42
Identity = 77/97 (79.38%), Postives = 89/97 (91.75%), Query Frame = 0 
Query:    1 SPSGFVGVCSSATRTREGLAVRVSASMLKRHRPKDRGMHMMSLGSLRPTLREYDSVTGLGRVMLRSNLLTGRPGGSAGNLVDNLGRPFVKWLEEKFN 97
            SP+GF+GV SS++RTREGLAVRVS +M+K HRP+DR M++MSLGSLRPTLREYDSVTGLGRVMLR+NLLTG+PG S GNLVDNLG PFV+WLE KFN
Sbjct:   20 SPNGFLGVVSSSSRTREGLAVRVSINMVKLHRPQDRAMYIMSLGSLRPTLREYDSVTGLGRVMLRANLLTGKPGESTGNLVDNLGLPFVQWLENKFN 116
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BLAST of mRNA_L-elsbetiae_contig1182.1571.1 vs. uniprot
Match: D7G8X2_ECTSI (WW domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8X2_ECTSI)

HSP 1 Score: 115 bits (287), Expect = 1.040e-27
Identity = 54/64 (84.38%), Postives = 60/64 (93.75%), Query Frame = 0 
Query:   34 KDRGMHMMSLGSLRPTLREYDSVTGLGRVMLRSNLLTGRPGGSAGNLVDNLGRPFVKWLEEKFN 97
            +DR M++MSLGSLRPTLREYDSVTGLGRVMLR+NLLTG+PGGS GNLVDNLG PFV+WLE KFN
Sbjct:  117 RDRAMYIMSLGSLRPTLREYDSVTGLGRVMLRANLLTGKPGGSTGNLVDNLGLPFVQWLENKFN 180
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1182.1571.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JH06_9PHAE1.510e-4279.38WW domain-containing protein n=1 Tax=Ectocarpus sp... [more]
D7G8X2_ECTSI1.040e-2784.38WW domain-containing protein n=1 Tax=Ectocarpus si... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1182contigL-elsbetiae_contig1182:20199..25799 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1182.1571.1mRNA_L-elsbetiae_contig1182.1571.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1182 20199..25799 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1182.1571.1 ID=prot_L-elsbetiae_contig1182.1571.1|Name=mRNA_L-elsbetiae_contig1182.1571.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=99bp
SPSGFVGVCSSATRTREGLAVRVSASMLKRHRPKDRGMHMMSLGSLRPTL
REYDSVTGLGRVMLRSNLLTGRPGGSAGNLVDNLGRPFVKWLEEKFNE*
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