mRNA_L-elsbetiae_contig6937.15708.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig6937.15708.1 vs. uniprot
Match: D7G798_ECTSI (MFS domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G798_ECTSI) HSP 1 Score: 463 bits (1192), Expect = 2.120e-160 Identity = 236/265 (89.06%), Postives = 252/265 (95.09%), Query Frame = 1 Query: 1 FSSVVIPIYLGELAPPTLRGTLGTMTQFALVSGILGSNLLAFPLATPGGWRWMFAVTPILALVELMCMPLIFESPRWLLARDEYSMEARLAISKLRGLVHDEDVQIEIDHILEAMSAQRTNHTSAHSRGAVLDLFTDKRQRLLVISFVILHAAQQLTGINAIFYYSNSFFVGIIDNPLVGTTLVGVVNVVATYVALQLMDKTGRVPLIMWSAGGMLVSTVVVTLSLLGLLPNVVAVFGVMAFVSFFEIGLGPIPWLIVAEMFDAK 795 FSSVV+PIYLGELAPPTLRGTLGTMTQFALV GILGSNLLAFPLATP GWRWMFAVTP LALVEL+C+P I ES RWLLA+D+YSMEARLAI KLRGL D D+QIEIDHILEA SAQRT+HTSAHSRGAVLDLF DKRQRLLV+SF+ILHAAQQLTGINA+FYYSNSFFVGIIDNPL+GTTLVGVVNVVATYVALQLMDKTGRVPL+MWSAGGML STVVVTLSLLG+LPNV+AVFGVMAFV+FFE+GLGPIPWLIVAEMFDAK Sbjct: 208 FSSVVVPIYLGELAPPTLRGTLGTMTQFALVIGILGSNLLAFPLATPSGWRWMFAVTPFLALVELVCIPFILESLRWLLAKDQYSMEARLAIGKLRGLTDDNDIQIEIDHILEASSAQRTSHTSAHSRGAVLDLFMDKRQRLLVVSFLILHAAQQLTGINAVFYYSNSFFVGIIDNPLIGTTLVGVVNVVATYVALQLMDKTGRVPLMMWSAGGMLASTVVVTLSLLGMLPNVIAVFGVMAFVTFFEMGLGPIPWLIVAEMFDAK 472
BLAST of mRNA_L-elsbetiae_contig6937.15708.1 vs. uniprot
Match: A0A835ZG82_9STRA (Solute carrier family facilitated glucose transporter member 3 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZG82_9STRA) HSP 1 Score: 342 bits (876), Expect = 1.540e-111 Identity = 172/266 (64.66%), Postives = 212/266 (79.70%), Query Frame = 1 Query: 1 FSSVVIPIYLGELAPPTLRGTLGTMTQFALVSGILGSNLLAFPLATPGGWRWMFAVTPILALVELMCMPLIFESPRWLLARDEYSMEARLAISKLRGLVHDEDVQIEIDHILEAMSAQRTN-HTSAHSRGAVLDLFTDKRQRLLVISFVILHAAQQLTGINAIFYYSNSFFVGIIDNPLVGTTLVGVVNVVATYVALQLMDKTGRVPLIMWSAGGMLVSTVVVTLSLLGLLPNVVAVFGVMAFVSFFEIGLGPIPWLIVAEMFDAK 795 ++SV++PIYLGELAPPTLRGTLGT+TQF++V GIL SNLL+FPLA GWR + VT +L+L +LM P I ESPRWLL++DEYS++A + + +LRG D +VQ E+DHI++A QR +SAH GAV DL TD R RLLVISF +LH AQQL+GINA+FYYS SFF GI+ +PLVGT G VNV+ATY AL+LMD+ GRV L++WS+GGM +S + +T SLLG+ PN VA+ GVMAFVSFFEIGLGPIPWLIVAEMFDAK Sbjct: 215 YASVIVPIYLGELAPPTLRGTLGTLTQFSMVIGILASNLLSFPLADESGWRMLLGVTAVLSLCQLMASPFIVESPRWLLSKDEYSIQASMLLKQLRGFRSDTEVQKEVDHIVQASRVQRLEGQSSAHGSGAVWDLITDPRVRLLVISFTVLHMAQQLSGINAVFYYSTSFFDGIVADPLVGTAAAGTVNVLATYAALKLMDRCGRVTLLLWSSGGMFLSCIAITASLLGIAPNYVALLGVMAFVSFFEIGLGPIPWLIVAEMFDAK 480
BLAST of mRNA_L-elsbetiae_contig6937.15708.1 vs. uniprot
Match: I2CP18_NANGC (Solute carrier family facilitated glucose transporter member 3 n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CP18_NANGC) HSP 1 Score: 320 bits (820), Expect = 1.060e-102 Identity = 163/265 (61.51%), Postives = 210/265 (79.25%), Query Frame = 1 Query: 1 FSSVVIPIYLGELAPPTLRGTLGTMTQFALVSGILGSNLLAFPLATPGGWRWMFAVTPILALVELMCMPLIFESPRWLLARDEYSMEARLAISKLRGLVHDEDVQIEIDHILEAMSAQRTNHTSAHSRGAVLDLFTDKRQRLLVISFVILHAAQQLTGINAIFYYSNSFFVGIIDNPLVGTTLVGVVNVVATYVALQLMDKTGRVPLIMWSAGGMLVSTVVVTLSLLGLLPNVVAVFGVMAFVSFFEIGLGPIPWLIVAEMFDAK 795 F+SV++PIYLGELAPPTLRGTLGT+TQF+LV+GIL S++LA+PLAT GWR++FAVT +LA ++L+C P + ESPRWLLARDE S +AR+ + KLRG ++V++E++H++ A +T H SAHS A+ DLF D RLL+IS ++L +QQL GINA+FYYS FF G+I +PL GT LV VNV+ATYVAL+LMD GR L++WSA GML S V+VT++L ++P+VVA+ GVM FV FFEIGLGPIPWLIVAEMFD K Sbjct: 215 FASVLVPIYLGELAPPTLRGTLGTLTQFSLVTGILVSDVLAYPLATAQGWRFLFAVTALLACLQLLCSPFLLESPRWLLARDEKSRDARVIMKKLRGFREAKEVEMEVEHMMMASRRAKTPHNSAHSASALYDLFRDPSVRLLLISCLVLQISQQLCGINAVFYYSTMFFQGLIADPLEGTILVASVNVIATYVALKLMDTCGRRTLVLWSASGMLFSCVMVTMALYHVVPDVVALLGVMLFVFFFEIGLGPIPWLIVAEMFDQK 479
BLAST of mRNA_L-elsbetiae_contig6937.15708.1 vs. uniprot
Match: A0A7S2S8N5_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2S8N5_9STRA) HSP 1 Score: 310 bits (794), Expect = 5.130e-101 Identity = 160/271 (59.04%), Postives = 202/271 (74.54%), Query Frame = 1 Query: 1 FSSVVIPIYLGELAPPTLRGTLGTMTQFALVSGILGSNLLAFPLATPGGWRWMFAVTPILALVELMCMPLIFESPRWLLARDEYSMEARLAISKLRGLVHDEDVQIEIDHILEAMSAQRTN------HTSAHSRGAVLDLFTDKRQRLLVISFVILHAAQQLTGINAIFYYSNSFFVGIIDNPLVGTTLVGVVNVVATYVALQLMDKTGRVPLIMWSAGGMLVSTVVVTLSLLGLLPNVVAVFGVMAFVSFFEIGLGPIPWLIVAEMFDAK 795 FSSV++PIYLGELAPPTLRGTLGT+TQF+LV GIL SNLLAFP ATP WR +F+VT I+A V+L+C P + ESPRWLL RD S +AR I KLRGL +D +V+ E+ H + A Q+T+ + G +++F D+ RLLV+S ++L QQL GINA+FYYS +FF G+I NPLVGTT+VGVVNVVATY+AL LMDK GR LI+WS+GGM + +++ ++LLG + VA+ V +V FFEIGLGPIPWLIVAEMFDAK Sbjct: 38 FSSVLVPIYLGELAPPTLRGTLGTLTQFSLVIGILVSNLLAFPFATPDSWRILFSVTSIVAFVQLLCAPFLLESPRWLLNRDCKSQKARYIIKKLRGLRYDHEVETEVSHFISASKVQQTDVELLKDEGKSSGGGPFMEMFRDESVRLLVVSALVLQMGQQLCGINAVFYYSTTFFEGVIPNPLVGTTIVGVVNVVATYIALLLMDKCGRRTLILWSSGGMFICCIILVVALLGYFSHFVALLAVNLYVFFFEIGLGPIPWLIVAEMFDAK 308
BLAST of mRNA_L-elsbetiae_contig6937.15708.1 vs. uniprot
Match: A0A7S2UII2_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UII2_9STRA) HSP 1 Score: 312 bits (799), Expect = 5.250e-101 Identity = 161/272 (59.19%), Postives = 203/272 (74.63%), Query Frame = 1 Query: 1 FSSVVIPIYLGELAPPTLRGTLGTMTQFALVSGILGSNLLAFPLATPGGWRWMFAVTPILALVELMCMPLIFESPRWLLARDEYSMEARLAISKLRGLVHDEDVQIEIDHILEAMSAQR-------TNHTSAHSRGAVLDLFTDKRQRLLVISFVILHAAQQLTGINAIFYYSNSFFVGIIDNPLVGTTLVGVVNVVATYVALQLMDKTGRVPLIMWSAGGMLVSTVVVTLSLLGLLPNVVAVFGVMAFVSFFEIGLGPIPWLIVAEMFDAK 795 F+SV++PIYLGELAPPTLRG LGT+TQFA+V GIL S+LLAFP AT WR++FAVT I+A ++++C P + ESPRWLL RD S +AR I KLRGL +D +V+ E+ H + A Q+ +N S+G ++LFTDK+ R+LV+S ++L AQQL GINA+FYYS FF G+I NPLVGTT+VG VNVVATYVAL LMD GR LI+WS+GGM + +++ LSLLG + VA+ V +VSFFEIGLGPIPWLIVAEMFDAK Sbjct: 66 FASVLVPIYLGELAPPTLRGMLGTLTQFAMVIGILVSDLLAFPFATEDKWRYLFAVTAIVAALQILCAPFLLESPRWLLNRDPSSRKARYLIKKLRGLRYDHEVETEVGHFISASKVQQMDPVSETSNPREQASKGPFMELFTDKKVRMLVVSSLVLQMAQQLCGINAVFYYSTMFFEGVISNPLVGTTVVGAVNVVATYVALMLMDSCGRRTLILWSSGGMFICCIMIVLSLLGFFNHFVALLAVNLYVSFFEIGLGPIPWLIVAEMFDAK 337
BLAST of mRNA_L-elsbetiae_contig6937.15708.1 vs. uniprot
Match: A0A7S4J4S9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J4S9_9STRA) HSP 1 Score: 310 bits (795), Expect = 3.750e-100 Identity = 163/266 (61.28%), Postives = 201/266 (75.56%), Query Frame = 1 Query: 4 SSVVIPIYLGELAPPTLRGTLGTMTQFALVSGILGSNLLAFPLATPGGWRWMFAVTPILALVELMCMPLIFESPRWLLARDEYSMEARLAISKLRGLVHDEDVQIEIDHILEAMSAQRTNHTSAH--SRGAVLDLFTDKRQRLLVISFVILHAAQQLTGINAIFYYSNSFFVGIIDNPLVGTTLVGVVNVVATYVALQLMDKTGRVPLIMWSAGGMLVSTVVVTLSLLGLLPNVVAVFGVMAFVSFFEIGLGPIPWLIVAEMFDAK 795 SSV++PIYLGELAPPTLRGTLGTMTQFALV GIL SNLL FP AT WR++FAVTP ALV+L+ P + ESPRWLL RD S +AR I K+RGL +D +V+ E H + A + Q+ + TS S+ AV ++F D++ RLLV+S ++L +QQL GINA+FYYSN FF G+IDNPLVGTT+VG VNV ATYVAL LMD GR LIMWS+G M +S +++ LSLL ++VA+ V +V FFEIG+GPIPWLIVAEMFDAK Sbjct: 110 SSVLVPIYLGELAPPTLRGTLGTMTQFALVIGILVSNLLGFPFATEDRWRFLFAVTPFFALVQLLLSPFLLESPRWLLGRDPNSRKARFIIKKIRGLRYDHEVETEAGHFVAAAAVQKPSETSEKVGSQSAVSEMFADRKIRLLVVSAIVLQVSQQLCGINAVFYYSNMFFEGVIDNPLVGTTVVGAVNVAATYVALLLMDSCGRRTLIMWSSGIMFLSCIIIVLSLLEYFGHMVALLFVNVYVIFFEIGMGPIPWLIVAEMFDAK 375
BLAST of mRNA_L-elsbetiae_contig6937.15708.1 vs. uniprot
Match: A0A7S1XZ20_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XZ20_9STRA) HSP 1 Score: 309 bits (792), Expect = 2.460e-99 Identity = 162/266 (60.90%), Postives = 203/266 (76.32%), Query Frame = 1 Query: 1 FSSVVIPIYLGELAPPTLRGTLGTMTQFALVSGILGSNLLAFPLATPGG-WRWMFAVTPILALVELMCMPLIFESPRWLLARDEYSMEARLAISKLRGLVHDEDVQIEIDHILEAMSAQRTNHTSAHSRGAVLDLFTDKRQRLLVISFVILHAAQQLTGINAIFYYSNSFFVGIIDNPLVGTTLVGVVNVVATYVALQLMDKTGRVPLIMWSAGGMLVSTVVVTLSLLGLLPNVVAVFGVMAFVSFFEIGLGPIPWLIVAEMFDAK 795 F+SVVIP+YLGE+APPT+RG LGT TQFA+V GIL ++LLAFPLA PG WR + VTP+LA V+++ PL+ ESPRW L+RD +AR + KLRG +++ E+DHILEA T HTSAHS GA+ DL TD+ R+LV+S V LH +QQL GINA+FYYSN FF GII+NPLV TTL VNV+ATYVAL+LMD GR LI+WS GML+ T+++TL+L GL+P VA+ GV+A+VSFFEIGLGP+ WL AE+FDAK Sbjct: 139 FASVVIPVYLGEIAPPTMRGALGTCTQFAMVIGILVADLLAFPLAKPGMFWRMLLGVTPVLAAVQILLAPLLVESPRWRLSRDPNCKKARRDLYKLRGFRTHAELEHEVDHILEASRTALTRHTSAHSGGAMWDLLTDRDVRVLVLSAVFLHVSQQLCGINAVFYYSNMFFDGIIENPLVATTLTAFVNVLATYVALRLMDICGRRTLILWSCMGMLIGTMLITLALHGLVPKYVALLGVLAYVSFFEIGLGPVAWLFPAEVFDAK 404
BLAST of mRNA_L-elsbetiae_contig6937.15708.1 vs. uniprot
Match: A0A7S1BUZ7_9STRA (Hypothetical protein n=5 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BUZ7_9STRA) HSP 1 Score: 308 bits (788), Expect = 3.690e-98 Identity = 161/265 (60.75%), Postives = 205/265 (77.36%), Query Frame = 1 Query: 4 SSVVIPIYLGELAPPTLRGTLGTMTQFALVSGILGSNLLAFPLATPG-GWRWMFAVTPILALVELMCMPLIFESPRWLLARDEYSMEARLAISKLRGLVHDEDVQIEIDHILEAMSAQRTNHTSAHSRGAVLDLFTDKRQRLLVISFVILHAAQQLTGINAIFYYSNSFFVGIIDNPLVGTTLVGVVNVVATYVALQLMDKTGRVPLIMWSAGGMLVSTVVVTLSLLGLLPNVVAVFGVMAFVSFFEIGLGPIPWLIVAEMFDAK 795 ++V++PIYLGELAPPTLRGTLGTMTQFA V GIL S LLAFP TP GWR++FAVTP+++L+++ C + ESPRW+L+RD S++AR I KLRGL D +V+ E++ L A + Q ++ + ++ AV+ +F D R R L ++ V+L AQQL GINA+FYYS +FF GIIDNPLVGTT + VNVVATYVAL LMD GR LI+WS+GGML+S +V+ L+LLG +PNVVA+ V +VSFFEIGLGPIPWLIVAEMFDAK Sbjct: 201 ATVLVPIYLGELAPPTLRGTLGTMTQFATVIGILASALLAFPFGTPDPGWRYLFAVTPVVSLMQIACGSFLLESPRWILSRDPQSLKARSIIKKLRGLRFDYEVETEVELFLSAAAVQ--DNEAENNGSAVVQMFQDLRVRHLAVAAVLLQMAQQLCGINAVFYYSTAFFEGIIDNPLVGTTTICAVNVVATYVALLLMDSCGRRVLILWSSGGMLISVIVIVLALLGYMPNVVALIAVNVYVSFFEIGLGPIPWLIVAEMFDAK 463
BLAST of mRNA_L-elsbetiae_contig6937.15708.1 vs. uniprot
Match: A0A7S2S0R8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S0R8_9STRA) HSP 1 Score: 297 bits (761), Expect = 9.390e-97 Identity = 150/265 (56.60%), Postives = 201/265 (75.85%), Query Frame = 1 Query: 1 FSSVVIPIYLGELAPPTLRGTLGTMTQFALVSGILGSNLLAFPLATPGGWRWMFAVTPILALVELMCMPLIFESPRWLLARDEYSMEARLAISKLRGLVHDEDVQIEIDHILEAMSAQRTNHTSAHSRGAVLDLFTDKRQRLLVISFVILHAAQQLTGINAIFYYSNSFFVGIIDNPLVGTTLVGVVNVVATYVALQLMDKTGRVPLIMWSAGGMLVSTVVVTLSLLGLLPNVVAVFGVMAFVSFFEIGLGPIPWLIVAEMFDAK 795 FSSV++P+YLGE+APP LRGT GT TQF++V GIL S + AFPLAT GWR++ +T +LA+++L P + ESPRWLL+R Y+ A + + KL GL DE V EI ++ +A RT H SAHS GA++DLF D R RLL+I V++H +QQL GINA+FYYS SFF G+IDNPL+GT +V VNV AT++A LMD+ R L++WSAGGM++S V++T +L+ ++PN +A+ V+++V+FFEIGLGPIPWLIVAEMFDAK Sbjct: 1 FSSVLVPVYLGEVAPPILRGTFGTCTQFSMVIGILMSGVFAFPLATASGWRFLMGITAVLAVLQLALSPYLLESPRWLLSRG-YTQRAGVVLKKLMGLRDDEHVAAEIQNLQDAHEMTRTRHKSAHSGGAIMDLFYDDRVRLLLICCVVMHISQQLCGINAVFYYSTSFFNGVIDNPLLGTVIVAAVNVAATWLAQILMDRCFRRTLLLWSAGGMILSLVILTAALMQVVPNYMALVSVISYVAFFEIGLGPIPWLIVAEMFDAK 264
BLAST of mRNA_L-elsbetiae_contig6937.15708.1 vs. uniprot
Match: A0A7S3PYK8_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PYK8_9STRA) HSP 1 Score: 295 bits (756), Expect = 1.900e-93 Identity = 155/275 (56.36%), Postives = 200/275 (72.73%), Query Frame = 1 Query: 4 SSVVIPIYLGELAPPTLRGTLGTMTQFALVSGILGSNLLAFPLATPGGWRWMFAVTPILALVELMCMPLIFESPRWLLARDEYSMEARLAISKLRGLVHDEDVQIEIDHILEAMSAQRTN-----------HTSAHSRGAVLDLFTDKRQRLLVISFVILHAAQQLTGINAIFYYSNSFFVGIIDNPLVGTTLVGVVNVVATYVALQLMDKTGRVPLIMWSAGGMLVSTVVVTLSLLGLLPNVVAVFGVMAFVSFFEIGLGPIPWLIVAEMFDAK 795 S+V++PIYLGELAPPTLRGTLGTMTQFA+V GIL ++L+AFP AT WR +F+V ++A ++L+C P + ESPRWLL++ S +AR I KLRGL +D +V E+DH L A++ Q N +T + G +D+ D++ RLLV+S +L A QQL+GINA+FYYS SFF G+I NP++GTTLVG VNV+ATY AL LMD GR LI+WS GGML+S +V+ LSL+G N+ A+ V +V FFEIGLGPIPWLIVAEMFDAK Sbjct: 165 STVIVPIYLGELAPPTLRGTLGTMTQFAMVVGILMADLIAFPFATLEKWRMLFSVNLMMAFLQLLCAPWLLESPRWLLSKKPGSRKARYIIKKLRGLRYDHEVDTEVDHFLGAVNVQNVNDYDDEIGNENRNTDMKTIG-FMDMLMDEKVRLLVVSSFVLQAVQQLSGINAVFYYSTSFFDGVIANPMIGTTLVGAVNVLATYAALLLMDSFGRRTLILWSCGGMLISCIVIVLSLMGKFSNITALVAVNTYVMFFEIGLGPIPWLIVAEMFDAK 438 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6937.15708.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig6937.15708.1 >prot_L-elsbetiae_contig6937.15708.1 ID=prot_L-elsbetiae_contig6937.15708.1|Name=mRNA_L-elsbetiae_contig6937.15708.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=266bp FSSVVIPIYLGELAPPTLRGTLGTMTQFALVSGILGSNLLAFPLATPGGWback to top mRNA from alignment at L-elsbetiae_contig6937:111..3030+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig6937.15708.1 ID=mRNA_L-elsbetiae_contig6937.15708.1|Name=mRNA_L-elsbetiae_contig6937.15708.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2920bp|location=Sequence derived from alignment at L-elsbetiae_contig6937:111..3030+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig6937:111..3030+ >mRNA_L-elsbetiae_contig6937.15708.1 ID=mRNA_L-elsbetiae_contig6937.15708.1|Name=mRNA_L-elsbetiae_contig6937.15708.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1596bp|location=Sequence derived from alignment at L-elsbetiae_contig6937:111..3030+ (Laminarionema elsbetiae ELsaHSoW15)back to top |