mRNA_L-elsbetiae_contig6924.15695.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig6924.15695.1 vs. uniprot
Match: D7FVU3_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVU3_ECTSI) HSP 1 Score: 312 bits (799), Expect = 5.590e-100 Identity = 266/404 (65.84%), Postives = 308/404 (76.24%), Query Frame = 1 Query: 1 VEVNDRGFDKRGNSIGAIPLIYAARKGLSTIVRALIDQGDTVSITDDAGFSALHMAAHHDHAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHLGAAKKLLLAGANSLLTWSN-SSGKSFVPLDVAVQTGRSAVVRELLRQRGIGGCGGQSGGSDALRQAAVFGQIDSIAMLMDAGVVD-TGRALIEAVGSCQEASVAYLLRRQKERPGARQASYVNNARNDRGATPLLVSFLGCPLGKVCNPRITRRLIDAGAETSSAVLVRCNRIPALVRVTPLEYLTAWVPGEQDETCPATTDEHLHRWEAIRRLLLQVEAVHAISWLWPGNATLLARPAKGTRRTAEPASTPLTMMLPVLKRRARRRSLLSETLFR 1206 VE+++ G DK G S G IP+I AA +GLS IVR L++QG VS+T+DAGF+ALH AAH XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX L A AN LLTWS+ SSG+SFVPL+VA QTGRSAVV ELLR+ GI CGG SGG DALR AAV+GQ+D ++MLMDAGVVD G AL+ AVGS +EA+V +LLR+Q+ER Q SYVN AR+D G T LL SF G K CNPRITRRL+DAGA+T+SAV +R R V VTPLEY+ W E + PAT DE L R EA RR+LL+V AVHA+SW+WP +A LLARPA R TA+ + T LT +LPVL+RRA RR+LL +TLFR Sbjct: 4 VELDEHGKDKYGISRGPIPIINAAGRGLSKIVRKLVEQGHDVSLTNDAGFTALHTAAHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLHAKANPLLTWSSESSGRSFVPLEVAAQTGRSAVVSELLREFGIRCCGGPSGGLDALRVAAVYGQVDIMSMLMDAGVVDPVGLALLAAVGSGKEAAVGFLLRQQEERW---QTSYVNIARDDDGLTALLWSFRGNK-NKPCNPRITRRLVDAGADTTSAVQLRAKRSRTCVNVTPLEYVNDWALRETNGDHPAT-DEQLLRLEATRRVLLRVVAVHAVSWIWPSDAPLLARPANSPR-TAKHSPTQLTTVLPVLRRRAGRRALLWDTLFR 401
BLAST of mRNA_L-elsbetiae_contig6924.15695.1 vs. uniprot
Match: A0A6H5KEI1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEI1_9PHAE) HSP 1 Score: 236 bits (603), Expect = 2.090e-71 Identity = 153/279 (54.84%), Postives = 186/279 (66.67%), Query Frame = 1 Query: 379 HLGAAKKLLLAGANSLLTWSNS-SGKSFVPLDVAVQTGRSAVVRELLRQRGIGGCGGQSGGS-DALRQAAVFGQIDSIAMLMDAGVVD-TGRALIEAVGSCQEASVAYLLRRQKERPGARQASYVNNARNDRGATPLLVSFLGCPLGKVCNPRITRRLIDAGAETSSAVLVRCNRIPALVRVTPLEYLTAWVPGEQDETCPATTDEHLHRWEAIRRLLLQVEAVHAISWLWPGNATLLARPAKGTRRTAEPASTPLTMMLPVLKRRARRRSLLSETLFR 1206 HLGA K LL A AN LLT S+ SG+SFVPL+VA QTGRSAVVRELLR+ GI CGG SG DALR AAV+GQ+D ++++M AGVVD G AL+ AVGS +EA+V +LLR+Q+ER Q SYVN A +D G T LL SF G K CNPRITRRL+DAGA+T+S V +R R V +TPLEY+ EA RR+LLQ AVHA+SW+WP + +LARPA R T + TPL+ ML VL+RRAR R+ L +TLFR Sbjct: 24 HLGAVKVLLHAKANPLLTRSSECSGRSFVPLEVAAQTGRSAVVRELLREFGIRCCGGPSGRLLDALRVAAVYGQVDIMSIIMGAGVVDPVGLALLAAVGSGKEAAVGFLLRQQQERW---QTSYVNTACDDDGLTALLWSF-GGNNNKPCNPRITRRLVDAGADTTSTVQLRAERSRTRVNMTPLEYVN----------------------EATRRVLLQAVAVHAVSWMWPSDDPVLARPANSPRTTKH-SPTPLSTMLTVLRRRARTRASLWDTLFR 275
BLAST of mRNA_L-elsbetiae_contig6924.15695.1 vs. uniprot
Match: D7FT11_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT11_ECTSI) HSP 1 Score: 186 bits (471), Expect = 5.450e-50 Identity = 157/398 (39.45%), Postives = 200/398 (50.25%), Query Frame = 1 Query: 22 FDKRGNSIGAIPLIYAARKGLSTIVRALIDQGDTVSITDDAGFSALHM--AAHHDHAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHLGAAKKLLLAGANSLLTWSNSSGKSF-VPLDVAVQTGRSAVVRELLRQRGIGGCGGQSGGSDALRQAAVFGQIDSIAMLMDAGVVDTGRALIEAVGSCQEASVAYLLRRQKERPGARQASYVNNARNDRGATPLLVSFLGCPLGKVCNPRITRRLIDAGAETSSAVLVRCNRIPALVRVTPLEYLTAWVPGEQDETCPATTDEHLHRWEAIRRLLLQVEAVHAISWLWPGNATLLARPAKGTRRTAEPASTPLTMMLPVLKRRARRRSLLSETLFR 1206 D+R NS GA PL+ A G S I + LI +G VSI D GF+ALH A D A XXXXXXXXXXXXX + ++LL AN LL ++ G + VPLD+A + G + VVREL+++ GI GC S G+ AL AA +D +A+L +AGVVDTG+AL A G EASV +LLR + + G NAR+ G TPL+V GC PRI R L+DAGA+T+S V V + + TPL + + + T EHL R EAI RLLL+V+AVHA+SWLWP A + R T EP L +MLP+LKRR +RR L TL R Sbjct: 132 IDQR-NSYGATPLMMAVHNGHSRIAKMLIKKGANVSIADKRGFTALHFCCAREEDDAIVKLLAKAGADLDAIIPGEGSAPLHRATHHEXXXXXXXXXXXXXNPDCQLPDGSTALHIAAEEGQVAVMRELLRGNANPLLIQTSPPGNTTTVPLDLAAKHGHTDVVRELIQELGIEGCDATSAGAHALAFAASNQHLDIMAILTEAGVVDTGKALYLAAGMGHEASVKFLLRHRHKEGGCGVEGAYLNARDVNGYTPLVVCTQGCFSQA---PRIVRMLVDAGADTTSPVQVMNLKGGVVFNDTPLAFTKLRLRKKIVADGKPATKEHLQRLEAICRLLLRVDAVHAVSWLWPSGAPFIGR---ATETDPEPPLPALKLMLPILKRRTKRRCGLVATLLR 522
BLAST of mRNA_L-elsbetiae_contig6924.15695.1 vs. uniprot
Match: A0A6H5KQV0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQV0_9PHAE) HSP 1 Score: 179 bits (455), Expect = 2.570e-48 Identity = 125/275 (45.45%), Postives = 167/275 (60.73%), Query Frame = 1 Query: 400 LLLAGANSLLTWSNSSGKS-FVPLDVAVQTGRSAVVRELLRQRGIGGCGGQSGGSDALRQAAVFGQIDSIAMLMDAGVVDTGRALIEAVGSCQEASVAYLLRRQKERPGARQASYVNNARNDRGATPLLVSFLGCPLGKVCNPRITRRLIDAGAETSSAVLVRCNRIPAL--VRVTPLEYLTAWVPGEQDETCPATTDEHLHRWEAIRRLLLQVEAVHAISWLWPGNA-TLLARPAKGTRRTA--EPASTPLTMMLPVLKRRARRRSLLSETLFR 1206 LLLA A+ LLT ++ SGK F+PLDVA Q G VV EL+RQ GI GCGG SGG +ALRQAA+F ++D +A+L DAGVVDTG AL+ A G EA + +LL + + R +A+Y+N N G T LL + C PR+ + L++AGA+T+S VL+ CN+ P +TPL + G + P T +E ++ E IRRLLL+ EAVHA+SWLWP + T+ AKGT RT A+TP M++ + RR R R L L R Sbjct: 167 LLLAKADPLLTCASDSGKERFLPLDVAAQNGHREVVNELIRQVGIDGCGGSSGGENALRQAALFSRLDIMAILTDAGVVDTGLALVVAAGYGGEAPLKFLLEQARGRKSTDRAAYMNTL-NGVGLTSLLDGI------QRCRPRVVQLLVEAGADTTSPVLI-CNQ-PGEDDFHITPLGLTMCLLGGRSAK--PLTMEEQ-NKLEVIRRLLLREEAVHAVSWLWPSDTPTITHATAKGTGRTTATSTAATPFIMLM--IGRRTRGRKGLLAALLR 427
BLAST of mRNA_L-elsbetiae_contig6924.15695.1 vs. uniprot
Match: A0A6H5KJA9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJA9_9PHAE) HSP 1 Score: 175 bits (443), Expect = 9.930e-47 Identity = 123/280 (43.93%), Postives = 168/280 (60.00%), Query Frame = 1 Query: 379 HLGAAKKLLLAGANSLLTW-SNSSGKSFVPLDVAVQTGRSAVVRELLRQRGIGGCGGQSGGSDALRQAAVFGQIDSIAMLMDAGVVDTGRALIEAVGSCQEASVAYLLRRQKERPGARQASYVNNARNDRGATPLLVSFLGCPLGKVCNPRITRRLIDAGAETSSAVLVRCNRIPALVRVTPLEYLTAWVPGEQDETC--PATTDEHLHRWEAIRRLLLQVEAVHAISWLWPGNATLLARPA-KGTRRTAEPASTPLTMMLPVLKRRARRRSLLSETLFR 1206 ++ AA+ LLLA A+ LLT + SG++F+PLD A + G VV EL+RQ GI GCGG SGG AL+QAA F ++ + +L +AGVVDTG AL+ A G E + +LL + + R +A+YVN R+ G TPLL + PR+ R L++AGA+T+S V VR V +TPL V + PA+ E LH+ EAIRRLLL+VEAVHA+SWLWP + + + R A +GT RT ST +T+ + V +RRAR R + L R Sbjct: 160 NVDAARLLLLAKADPLLTTVPDPSGRTFLPLDAAAENGHPEVVNELIRQVGIDGCGGSSGGVRALQQAAQFKNLNIMVILTNAGVVDTGLALVVAAGYGGETPLKFLLEQARARKTMDEAAYVNT-RDRGGVTPLLWGI------QHYRPRVVRLLVEAGADTTSPVAVRNQLGGDDVSITPLGLTMNPVRDKVKVVGRGPASP-EQLHKLEAIRRLLLRVEAVHAVSWLWPSDISTITRAAARGTDRTTA-ISTAVTLPMLVTRRRARGRKVPLAALLR 430
BLAST of mRNA_L-elsbetiae_contig6924.15695.1 vs. uniprot
Match: D8LL76_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL76_ECTSI) HSP 1 Score: 162 bits (411), Expect = 3.650e-42 Identity = 110/261 (42.15%), Postives = 147/261 (56.32%), Query Frame = 1 Query: 424 LLTWSNSSGKSFVPLDVAVQTGRSAVVRELLRQRGIGGCGGQSGGSDALRQAAVFGQIDSIAMLMDAGVVDTGRALIEAVGSCQEASVAYLLRRQKERPGARQASYVNNARNDRGATPLLVSFLGCPLGKVCNPRITRRLIDAGAETSSAVLVRCNRIPALVRVTPLEYLTAWVPGEQDETCPATTDEHLHRWEAIRRLLLQVEAVHAISWLWPGNATLLARPAKGTRRTAEPASTPLTMMLPVLKRRARRRSLLSETLFR 1206 LL SSG +FVPLD A G AV REL+++ GI GC G S G DAL QAAV +D +A+L DAGVVDTG AL+ V +E ++ +LL ++ E G + +Y + R+ RG TPLL + P C+PR+ R L+DAGA+ + AV V + + TPL+ T + + + AT + L A RRLLLQVE VHA SWLW G+A A P K +T PL LP++ RR+ RR +FR Sbjct: 171 LLPTRMSSGNTFVPLDGAALNGHLAVARELVQRFGIRGCAGASAGVDALGQAAVDQHLDVMALLCDAGVVDTGNALVATVFLGRERALKFLLEQKGE--GTARTTYASTPRDGRGHTPLLSAVTTGP----CSPRVVRLLVDAGADATLAVRVP-DGFGRSTKYTPLDCATRCLAEKVVDEDFATAQQ-LRNLRASRRLLLQVEVVHATSWLWGGHAGCPAAPGKKRAQTESTNGKPLKSRLPIMWRRSARRGAALPGVFR 423
BLAST of mRNA_L-elsbetiae_contig6924.15695.1 vs. uniprot
Match: D7G1H7_ECTSI (EsV-1-199 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1H7_ECTSI) HSP 1 Score: 159 bits (403), Expect = 6.050e-41 Identity = 118/275 (42.91%), Postives = 162/275 (58.91%), Query Frame = 1 Query: 400 LLLAGANSLLTWSNSSGKSFVPLDVAVQTGRSAVVRELLRQRGIGGCGGQSGGSDALRQAAVFGQIDSIAMLMDAG-VVDTGRALIEAVGSCQEASVAYLLRRQKERPGARQASYVNNARNDRGATPLLVSFLGCPLGKVCNPRITRRLIDAGAETSSAV-LVRCNRIPALVRVTPLEYLTAWV-PGEQDETCPATTDEHLHRWEAIRRLLLQVEAVHAISWLWP-GNATLLARPAKGTR-RTAEPA-STPLTMMLPVLKRRARRRSLLSETLFR 1206 LL A AN LL G S+VPL++A G V RE++RQ GI GCGG SGG +ALRQAA ++ +A+L+DAG VVDTG ALI A + + +V +LLRR++ A +YVN R+ G TP++ + + G++C+P+I R L+DAGA T+ AV + R TPL + T + G D A T E L R + R LL + EAVHA+SWLW G +A+ A T+ TA A +TPL M P+L+R+ R +L +TLFR Sbjct: 164 LLRAKANPLLCSHTPMGVSYVPLEMAALHGNPDVAREMIRQVGIRGCGGPSGGVEALRQAADEEHLEFMAVLLDAGGVVDTGPALILAAENGRAVAVKFLLRRRQ----ADADAYVNGTRDPYGRTPVMCA-VDVGAGRLCSPKIVRLLVDAGANTTRAVGVTRITPRWEKTSETPLAFTTRLLREGRVDGE--AATKEQLQRLKDTRCLLSRAEAVHAVSWLWASGEPPRIAQAAGDTKTETASTAVATPLRAMSPMLRRKPGTRGVLLKTLFR 431
BLAST of mRNA_L-elsbetiae_contig6924.15695.1 vs. uniprot
Match: D8LJF9_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJF9_ECTSI) HSP 1 Score: 149 bits (377), Expect = 2.550e-37 Identity = 112/275 (40.73%), Postives = 158/275 (57.45%), Query Frame = 1 Query: 382 LGAAKKLLLAGANSLLTWSNSSGKSFVPLDVAVQTGRSAVVRELLRQRGIGGCGGQSGGSDALRQAAVFGQIDSIAMLMDAGVVDTGRALIEAVGSCQEASVAYLLRRQKERPGARQASYVNNARNDRGATPLLVSFLGCPLGKVCN-PRITRRLIDAGAETSSAVLVRCNRIPALVRVTPLEYLTAWVPGEQDETCPATTDEHLHRWEAIRRLLLQVEAVHAISWLWPGNATLLARPAKGTRR--------TAEPASTP-LTMMLPVLKRRARR 1176 L A ++LL A AN L+T + + +PLD A + G V+REL+++ GI GCGGQS G AL A ++ ++A+L AGVVDTG+AL + G +EASV YLL+ + G +YVN R+ G TPLL S C + + + PR+ R L++AGA+T++ + + L TPL+ LT + ++ + + L R E IRRLLLQVEAVHA SWLWP ++ G RR TA A+ P L +LP+L+RRARR Sbjct: 147 LEATRELLRANANPLIT--RAPLPTLLPLDSAARNGNLLVMRELIQRVGIEGCGGQSRGEVALLMAGEGRRVAAMALLTHAGVVDTGQALTISAGLGREASVKYLLQNHAKHYGP--GAYVN-VRDRNGTTPLLSSIYVCGVDEQSSFPRVARLLVEAGADTTTELRRTNSMGVVLFSCTPLK-LTVHILQDKKVDGTYISKQRLWRLEGIRRLLLQVEAVHAESWLWPSSS------GDGGRRPDNAAEVTTATNAAAPKLGRVLPILRRRARR 409
BLAST of mRNA_L-elsbetiae_contig6924.15695.1 vs. uniprot
Match: A0A6H5K037_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K037_9PHAE) HSP 1 Score: 147 bits (371), Expect = 1.550e-36 Identity = 101/222 (45.50%), Postives = 129/222 (58.11%), Query Frame = 1 Query: 415 ANSLLTWSNS-SGKSFVPLDVAVQTGRSAVVRELLRQRGIGGCGGQSGGSDALRQAAVFGQIDSIAMLMDAGVVDTGRALIEAVGSCQEASVAYLLRRQKERPGARQASYVNNARNDRGATPLLVSFLGCPLGKVCNPRITRRLIDAGAETSSAVLVRCNRIPALVRVTPLEYLTAWVPGEQDETCPATTDEHLHRWEAIRRLLLQVEAVHAISWLWPGNAT 1077 AN+LL + SG +FVPLDVAVQ G S VVREL Q G+ GCGG SGG ++LR A +D + +L GVVDTGRAL+ A + +E SV +LL+ Q A YVNN + G TPL+ + C +PRI R LIDA A+T S VLV + R TPL + T + + AT +E L +AI RLL QV+AVHA+SWLW + T Sbjct: 156 ANTLLASVPAPSGATFVPLDVAVQHGHSEVVRELTHQLGVRGCGGVSGGVESLRLATTEQDVDIMGILTVGGVVDTGRALVVAAENSREESVKFLLQHQ----AGGGAWYVNNTLDPFGRTPLVCTIEACGSS---SPRIARFLIDAEADTKSTVLVTKSGQWTTSRDTPLGFATHSLRQNKVGRKNAT-EEQLRSLKAIHRLLSQVDAVHAVSWLWRSSDT 369
BLAST of mRNA_L-elsbetiae_contig6924.15695.1 vs. uniprot
Match: A0A6H5JL33_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL33_9PHAE) HSP 1 Score: 147 bits (370), Expect = 2.190e-36 Identity = 95/211 (45.02%), Postives = 124/211 (58.77%), Query Frame = 1 Query: 409 AGANSLLTWSNSSGKSFVPLDVAVQTGRSAVVRELLRQRGIGGCGGQSGGSDALRQAAVFGQIDSIAMLMDAGVVDTGRALIEAVGSCQEASVAYLLR-RQKERPGARQASYVNNARNDRGATPLLVSFLGCPLGKVCNPRITRRLIDAGAETSSAVLVRCNRIPALVRVTPLEYLTAWVPGEQDETCPATTDEHLHRWEAIRRLLLQVEA 1038 A AN LLT SG +FVPLD A + G++ VVREL++Q I GCGG SGG ALR AA+ +D +++L DAGV+DTG ALI A G EA V LL+ R G YVN+ + G TPLL S G G C+PR+ R L+DAGA+T SAV ++ VTP+++ T + D A ++H+H+ AI RL QVEA Sbjct: 172 AKANPLLTKPTPSGVTFVPLDTAAEYGQTEVVRELIKQVSIKGCGGASGGVYALRLAALSQNVDVMSVLADAGVMDTGEALITAAGRNDEAGVKLLLQQRHGTSAGGELYMYVNDTHDLVGRTPLLCSIDGGMAGFRCSPRVVRLLVDAGADTVSAVPLKGTAGQIGRSVTPIDFATCSLHENMDGGKTAM-EKHVHKLRAIHRLFSQVEA 381 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6924.15695.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig6924.15695.1 >prot_L-elsbetiae_contig6924.15695.1 ID=prot_L-elsbetiae_contig6924.15695.1|Name=mRNA_L-elsbetiae_contig6924.15695.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=403bp VEVNDRGFDKRGNSIGAIPLIYAARKGLSTIVRALIDQGDTVSITDDAGFback to top mRNA from alignment at L-elsbetiae_contig6924:2949..4157+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig6924.15695.1 ID=mRNA_L-elsbetiae_contig6924.15695.1|Name=mRNA_L-elsbetiae_contig6924.15695.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1209bp|location=Sequence derived from alignment at L-elsbetiae_contig6924:2949..4157+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig6924:2949..4157+ >mRNA_L-elsbetiae_contig6924.15695.1 ID=mRNA_L-elsbetiae_contig6924.15695.1|Name=mRNA_L-elsbetiae_contig6924.15695.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2418bp|location=Sequence derived from alignment at L-elsbetiae_contig6924:2949..4157+ (Laminarionema elsbetiae ELsaHSoW15)back to top |