prot_L-elsbetiae_contig692.15689.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig692.15689.1
Unique Nameprot_L-elsbetiae_contig692.15689.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length764
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig692.15689.1 vs. uniprot
Match: D8LCF3_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCF3_ECTSI)

HSP 1 Score: 158 bits (400), Expect = 1.590e-36
Identity = 91/129 (70.54%), Postives = 101/129 (78.29%), Query Frame = 0 
Query:  218 RLEARRRERLARSPYVYGGVG-RADPNAGLPKSVRP-PLARGXXXXXXXIDGGDSKAATHAKPPAPKFWTCQGCYVKVYNMDLKACDMCRRARNFGTPHYRNPPAVLPGGRTLYTVRAGLEAAGLATPG 344
            RL+ARRR R ARSPY++GG G R DP+ GLP SVRP  LA GXXXXXXX     +K        A K WTCQGCYV+VY+MDLK CDMCRR RNFGTP ++NPPAVLPGGRTLYTVRAGLEAAGLA+PG
Sbjct:  269 RLQARRRGRHARSPYLHGGTGGRIDPSGGLPTSVRPVALALGXXXXXXXX----AKLGGTPVRSASKGWTCQGCYVRVYDMDLKVCDMCRRPRNFGTPSFKNPPAVLPGGRTLYTVRAGLEAAGLASPG 393
[Close]
BLAST of mRNA_L-elsbetiae_contig692.15689.1 vs. uniprot
Match: A0A6H5KXZ2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXZ2_9PHAE)

HSP 1 Score: 153 bits (386), Expect = 2.000e-34
Identity = 144/323 (44.58%), Postives = 161/323 (49.85%), Query Frame = 0 
Query:   60 SRKRKTSD--------AHDSRTGGXXXXXXXDXXXXXTGTNXXXAGAEKGXXXXXXXX-SSDEPAVEQPRTKRARTSSEGGLCPHP--------------PAAADATGRANHQASSSXXXXXXXXXXAPTPGTAARGKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGQDDTLAEEARRLEARRRE-------------RLARSPYVYGGVG-RADPNAGLPKSVRP-PLARGXXXXXXXIDGGDSKAATHAKPPAPKFWTCQGCYVKVYNMDLKACDMCRRARNFGTPHYRNPPAVLPGGRTLYTVRAGLEAAGLATPG 344
            SRKRKTSD          D            D      G N    GA+           SSD+ A+ QPR KRARTSSEGG   HP              P+ A++  R  + +SS            P    A RGKG              XXXXXXX X XXXXXX                                 R ARSPY++GG G R DP+ GLP SVRP  LA GXXXXXXX     +K        A K WTCQGCYV+VY+MDLKACDMCRR RNFGTP ++NPPAVLPGGRTLYTVRAGLEAAGLA+PG
Sbjct:  779 SRKRKTSDDQGSGPQRGEDLPGAAAAAAVPKDAAGGENGKNGTGTGADMDKADDAGGSDSSDDLAIVQPRPKRARTSSEGGGVAHPSSGTPTSAGDGKSGPSPAESRQRVANASSSPVAA-------GPAASPATRGKGGADNSGGGVDKAGAXXXXXXXRXNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRHARSPYLHGGTGGRIDPSGGLPTSVRPVALALGXXXXXXXX----AKLGGTPVKSASKGWTCQGCYVRVYDMDLKACDMCRRPRNFGTPSFKNPPAVLPGGRTLYTVRAGLEAAGLASPG 1090
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig692.15689.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LCF3_ECTSI1.590e-3670.54Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5KXZ2_9PHAE2.000e-3444.58Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00833POAALLERGENcoord: 525..539
score: 37.78
coord: 482..501
score: 33.33
coord: 436..453
score: 38.27
coord: 501..519
score: 31.58

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig692contigL-elsbetiae_contig692:964..6219 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig692.15689.1mRNA_L-elsbetiae_contig692.15689.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig692 964..6219 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig692.15689.1 ID=prot_L-elsbetiae_contig692.15689.1|Name=mRNA_L-elsbetiae_contig692.15689.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=764bp
MPPSASGGGGGGGGGGGRETAPRASAYGGAEGVEAQDTPAAAAAAAASEE
ESSPTVTPGSRKRKTSDAHDSRTGGGGGGGGGDGSSGGTGTNGTNAGAEK
GGEGAQGEDSSDEPAVEQPRTKRARTSSEGGLCPHPPAAADATGRANHQA
SSSASSSSAPSSLAPTPGTAARGKGGAAAAAAGDKEDARVAGGAGGAPAA
TTPGRGGQDDTLAEEARRLEARRRERLARSPYVYGGVGRADPNAGLPKSV
RPPLARGGGGGGGGIDGGDSKAATHAKPPAPKFWTCQGCYVKVYNMDLKA
CDMCRRARNFGTPHYRNPPAVLPGGRTLYTVRAGLEAAGLATPGKSSGSA
AGGAVAAEGASDTTTAASPAAARPATSRGKSKPGVTFSFAASSPPAATPS
KLPVVASEEAAGAGAAAAAFSFGGAGAAAAAAAPAAASASTAAPASAAAS
ATPAPAFSFGAGGATPSGASGGAKAPSSSDPAAAPITPATAPAFKFGAPA
PATSTATTAATPSKTNATPAPAAKGAATSTGGAGSTTAAAAAAPAAAATP
SFSFGGAAAPPSTTTAAAAAPASGLAAKFTFGAPAPAPASGAVSTSAAAN
PGVAGFTFGGKPAAAATSDAAAATPAKPLFGAAPPAAAATTVTAAPAAPA
FSFGAAAAPAAAPSASAATAAGGIASRLGAAPAVSGLAAPKPSTATGFGG
FGGSGGSNLNGFSAPAGGAGGGTKRASSPAVAVATGFGAAPPSRGPSPAI
SSFGAGATGFGGAA
back to top