mRNA_L-elsbetiae_contig69.15666.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig69.15666.1 vs. uniprot
Match: D7G0Y8_ECTSI (Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0Y8_ECTSI) HSP 1 Score: 394 bits (1013), Expect = 3.180e-137 Identity = 195/248 (78.63%), Postives = 218/248 (87.90%), Query Frame = 1 Query: 1 ENITYRVGGLAITGAEAFLNSFGPTFSDYLNQTVGEVFPGVGFVAVPLAFEDVWPAVSSATVDFLFLNPSSASCMERQEAIHEFGAPAILSLRNFRQGNELNAFGGVLITAANRTDITDIMHLKDKIVEGVSITGLGAFQLQWGLLQDAGFNLMADPSELRLAYNQKKIVRDVIDGSVDVGFVRTDMVERMDAADLVPEWPLQVLPHVPAELSKEVVRALLGLNQTHEAAVAGKYSTWDAPLSYSSLR 744 EN TYR+GGLAITG EAFL SF PTFS YLNQTVGEV+PGVGF+AVPLAF+DVW AVSSA+VDFLFLNP SASCME EFG AILSLRNFRQGNELN FGGV+ITAANR+DIT++ HL+DK+VEGVS++GLGAFQLQWGLLQD GFNLMAD E+R AYNQKKIV DVI+ +VDVGFVRTDMVERMDAADLVPEWPLQ L HVP++L+KEVV ALL +N+THEAAV+G YSTWD PLSY+ LR Sbjct: 4 ENKTYRIGGLAITGTEAFLESFEPTFSAYLNQTVGEVYPGVGFIAVPLAFDDVWDAVSSASVDFLFLNPGSASCMES-----EFGVSAILSLRNFRQGNELNLFGGVVITAANRSDITEVAHLQDKVVEGVSVSGLGAFQLQWGLLQDQGFNLMADTEEVRFAYNQKKIVYDVINENVDVGFVRTDMVERMDAADLVPEWPLQALSHVPSDLAKEVVGALLLINETHEAAVSGGYSTWDVPLSYADLR 246
BLAST of mRNA_L-elsbetiae_contig69.15666.1 vs. uniprot
Match: A0A7S3YSR5_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3YSR5_9EUKA) HSP 1 Score: 214 bits (545), Expect = 1.370e-60 Identity = 118/260 (45.38%), Postives = 156/260 (60.00%), Query Frame = 1 Query: 13 YRVGGLAITGAEAFLNSFGPTFSDYLNQTVGEVF-PGVGFVAVPLAFEDVWPAVSSATVDFLFLNPSSASCMERQEAIHEFGAPAILSLRNFRQGNELNAFGGVLITAANRTDITDIMHLKDKIVEGVSITGLGAFQLQWGLLQDAGFNLMADPSELRLAYNQKKIVRDVIDGSVDVGFVRTDMVERMDA-----------------------------ADLVPEWPLQVLPHVPAELSKEVVRALLGLNQTHEAAVAGK 702 Y++GGLAI GA F F PTF DYLNQ VG +F P + F ++PL F + V + T+DF++ NPS+ SC++ EFGA A+L+LRN R+G EL FGG++ T AN T+IT + LKDK VE VSI+GLGA Q+QW L+ + G NLM DP+++R A+NQKKIV DV G VDVGFVRTDM+E MDA L PEW L LPH+ ++ K V + L +T+ ++ K Sbjct: 46 YKIGGLAIRGAADFEKRFSPTFRDYLNQEVGPLFNPPITFESLPLNFSSTFTRVEAGTIDFVYTNPSAFSCLDS-----EFGASAVLTLRNLRRGQELTQFGGIIFTRANNTNITQLSDLKDKKVEAVSISGLGAAQMQWRLMTEKGMNLMVDPAQVRFAFNQKKIVHDVRRGDVDVGFVRTDMIEGMDANGETSLSYFKVIHKQNITYEGSPFPFQISTRLYPEWSLGALPHMNSDY-KVVEEVINALMRTNSSSNCSK 299
BLAST of mRNA_L-elsbetiae_contig69.15666.1 vs. uniprot
Match: A0A7S4CND3_9EUGL (Hypothetical protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4CND3_9EUGL) HSP 1 Score: 197 bits (500), Expect = 5.350e-60 Identity = 100/187 (53.48%), Postives = 131/187 (70.05%), Query Frame = 1 Query: 22 GGLAITGAEAFLNSFGPTFSDYLNQTVGEVFPGVGFVAVPLAFEDVWPAVSSATVDFLFLNPSSASCMERQEAIHEFGAPAILSLRNFRQGNELNAFGGVLITAANRTDITDIMHLKDKIVEGVSITGLGAFQLQWGLLQDAGFNLMADPSELRLAYNQKKIVRDVIDGSVDVGFVRTDMVERMDAA 582 GGLAI GA F+ + PT++ YLN+TVG+ + F AVP+ F + + V S +DF++ NPS+ SC+E E+G I+SLRNFR+G LN FGG + T +NRTDI I L+DKIVE VSITGLGA Q+QW L+ + G N + DP+++ A+NQKKIVRDVI G+ DVGFVRTDM E MD+A Sbjct: 1 GGLAIRGAADFMKRWEPTYATYLNETVGKAL-NISFEAVPMNFAETFDLVGSKAIDFIYTNPSAFSCVES-----EYGVAPIVSLRNFRKGFTLNQFGGTIFTRSNRTDINTIHDLRDKIVEAVSITGLGACQMQWRLMIEKGINFLVDPAQVVFAFNQKKIVRDVIAGNADVGFVRTDMAEGMDSA 181
BLAST of mRNA_L-elsbetiae_contig69.15666.1 vs. uniprot
Match: A0A7S1T0N3_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1T0N3_9CHLO) HSP 1 Score: 193 bits (491), Expect = 3.300e-55 Identity = 113/268 (42.16%), Postives = 143/268 (53.36%), Query Frame = 1 Query: 16 RVGGLAITGAEAFLNSFGPTFSDYLNQTVGEVFPGVGFVAVPLAFEDVWPAVSSATVDFLFLNPSSASCMERQEAIHEFGAPAILSLRNFRQGNELNAFGGVLITAANRTDITDIMHLKDKIVEGVSITGLGAFQLQWGLLQDAGFNLMADPSELRLAYNQKKIVRDVIDGSVDVGFVRTDMVERMDAADLV--------------------------PEWPLQVLPHVPAELSKEVVRALLGLNQTHEAAVAGKYSTWDAPLSYSSL 741 RVG L I G E + TFS YL T G G F V L F+ + A VD L++NPS SC+E Q FGA +L NFR+G +L+ F G + T ++R DI + LK KIVE VSI+GLGA QLQW L G + + DP ++R +YNQ+ IV+DVI G DVG VRTD+ E M A L+ PEWPL LPH E+ +EV+ A+L L HEAAV G YS W P+SY + Sbjct: 37 RVGALGIKGEETLFAQWNATFSTYLTATAGAALGGRTFQLVYLDFDTAYEAAQHGCVDILYVNPSMYSCLELQ-----FGAAVFATLINFRRGYDLDRFYGTIFTRSDREDIRTVEDLKGKIVEAVSISGLGACQLQWHELLLNGVDFLIDPKQVRFSYNQELIVQDVIAGHADVGMVRTDLAEGMAAEGLINITDIRVINQKDDTDFPFPYSTRLAAPEWPLASLPHTSIEVIEEVMYAVLQLESDHEAAVQGLYSGWRLPVSYLGM 299
BLAST of mRNA_L-elsbetiae_contig69.15666.1 vs. uniprot
Match: A0A7S0DIN8_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0DIN8_9EUKA) HSP 1 Score: 197 bits (502), Expect = 2.010e-54 Identity = 113/264 (42.80%), Postives = 151/264 (57.20%), Query Frame = 1 Query: 13 YRVGGLAITGAEAFLNSFGPTFSDYLNQTVGEVF-PGVGFVAVPLAFEDVWPAVSSATVDFLFLNPSSASCMERQEAIHEFGAPAILSLRNFRQGNELNAFGGVLITAANRTDITDIMHLKDKIVEGVSITGLGAFQLQWGLLQDAGFNLMADPSELRLAYNQKKIVRDVIDGSVDVGFVRTDMVERM-----------------------------DAADLVPEWPLQVLPHVPAELSKEVVRALLGLNQTHEAAVAGKYSTW 714 +++GGLAI G F F PTFS YL +TVG F P + F ++ L F + V A+VDF++ NPS+ SC+E EF AI++LRNFRQGNEL FGG++ T ++ +I I L+ KIVE VSI+GLGA Q+QW LLQD G++LM P ++R A+NQKKIV DV++G+ DVGFVRTDM+E M + +L PEW L +LPHV + R L H+ A K T+ Sbjct: 39 WKIGGLAIRGPTDFHARFSPTFSTYLTETVGPQFNPPIRFESIALDFSSTFTQVEQASVDFIYTNPSAFSCLES-----EFDVSAIVTLRNFRQGNELTRFGGIIFTRSDNDEINAIADLEGKIVEAVSISGLGAAQMQWKLLQDKGYSLMTLPKQVRFAFNQKKIVLDVLNGNADVGFVRTDMIEGMASKGEVNISSFKVIHQQNMTYEGRRFPFLSSTELYPEWSLGMLPHVGIDYMVSE-RVAFALMDIHKDHWAAKNGTY 296
BLAST of mRNA_L-elsbetiae_contig69.15666.1 vs. uniprot
Match: A0A812P169_9DINO (TtrS protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812P169_9DINO) HSP 1 Score: 178 bits (452), Expect = 1.740e-47 Identity = 108/273 (39.56%), Postives = 152/273 (55.68%), Query Frame = 1 Query: 16 RVGGLAITGAEAFLNSFGPTFSDYLNQTVGEVFPGVGFVAVPLAFEDVWPAVSSATVDFLFLNPSSASCMERQEAIHEFGAPAILSLRNFRQGNELNAFGGVLITAANRTDITDIMHLKDKIVEGVSITGLGAFQLQWGLLQDAGFNLMADPSELRLAYNQKKIVRDVIDGSVDVGFVRTDMVERMDAA-------------------------DLVPEWPLQVLPHVPAELSKEVVRALLGLN------QTHEAAVAGKYSTWDAPLSYSSL 741 ++GGLAI GA AF NS GPTF DYL + + G+ F A+PL F + V + VDF+F NP++ +CM A+ EF + SL N+R+GN L F GV+ T + T + L++ VE VSI+GLGA QLQ L G ++M D +L A+NQ KIV+DV G DVGFVRTD+++R AA D PEWP+ LPHV AE+++ V +L+ L+ + E A+AG +++W P++Y L Sbjct: 40 QIGGLAIQGAAAFENSLGPTFQDYLTRRLN-ASKGLEFEAIPLDFNQNFELVGAGQVDFIFSNPAAYTCM----AV-EFNLRTVASLINYRKGNALGQFAGVIFTRQDSPFHT-VDDLRNATVEAVSISGLGAMQLQQAELLSQGLDIMTDVPQLIFAFNQNKIVQDVELGLADVGFVRTDLIDRNVAANKTKWEYFRVIGQIADSDFPFARSTDFTPEWPIGALPHVHAEVTELVASSLMSLDRFSPDPELSEPAIAGNFASWSTPMNYFGL 305
BLAST of mRNA_L-elsbetiae_contig69.15666.1 vs. uniprot
Match: A0A812RNW9_9DINO (TtrS protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812RNW9_9DINO) HSP 1 Score: 177 bits (448), Expect = 6.140e-47 Identity = 107/272 (39.34%), Postives = 152/272 (55.88%), Query Frame = 1 Query: 19 VGGLAITGAEAFLNSFGPTFSDYLNQTVGEVFPGVGFVAVPLAFEDVWPAVSSATVDFLFLNPSSASCMERQEAIHEFGAPAILSLRNFRQGNELNAFGGVLITAANRTDITDIMHLKDKIVEGVSITGLGAFQLQWGLLQDAGFNLMADPSELRLAYNQKKIVRDVIDGSVDVGFVRTDMVERMDAA-------------------------DLVPEWPLQVLPHVPAELSKEVVRALLGLN------QTHEAAVAGKYSTWDAPLSYSSL 741 +GGLAI GA AF S GPTF DYL + + + G+ F ++PL F + V + VDF++ NP++ +CM A+ EF + SL N+R+GN L F GV+ T + T + L++ IVE VSI+GLGA QLQ L G ++M D L A+NQ KIV+DV G DVGFVRTD+++R AA D PEWP+ LPHV AE+++ V R+L+ L+ + E A+AG +++W P++Y L Sbjct: 506 IGGLAIQGAAAFETSLGPTFKDYLTRRLNASY-GLEFESIPLDFNQNFEFVGAGQVDFIYSNPAAYTCM----AV-EFNLRTVASLINYRKGNALGQFAGVIFTRHDSPFHT-VDDLRNAIVEAVSISGLGAMQLQQAELLSQGLDIMTDVPRLVFAFNQNKIVQDVELGLADVGFVRTDLIDRNVAANKTKWEYFRVIGQIADTDFPFARSTDFTPEWPIGALPHVHAEVTELVARSLMSLDRFSPDPELSEPAIAGNFASWSTPMNYFGL 770
BLAST of mRNA_L-elsbetiae_contig69.15666.1 vs. uniprot
Match: F2UDV5_SALR5 (Guanylate cyclase n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2UDV5_SALR5) HSP 1 Score: 174 bits (442), Expect = 3.700e-46 Identity = 104/275 (37.82%), Postives = 147/275 (53.45%), Query Frame = 1 Query: 13 YRVGGLAITGAEAFLNSFGPTFSDYLNQTVGEVF-PGVGFVAVPLAFEDVWPAVSSATVDFLFLNPSSASCMERQEAIHEFGAPAILSLRNFRQGNELNAFGGVLITAANRTDITDIMHLKDKIVEGVSITGLGAFQLQWGLLQDAGFNLMADPSELRLAYNQKKIVRDVIDGSVDVGFVRTDMVERMDAAD------------------------------LVPEWPLQVLPHVPAELSKEVVRALLGLNQTHEAAVAGKYSTWDAPLSYSSLR 744 Y VG L G + F F FS YL T G F P V F A+P+AF D +VS +DF + NP+ SC+E E + AP +L++RNFR G+EL F GV+ TAA+R DI + ++ K + GVS+T LG FQ+Q+G+L AG LM D + + + N ++ V DV++G+ D+GFVRTD +E M A+ L PEWP P V ++ + V++AL LN + +V G+Y+ W SY SLR Sbjct: 33 YTVGVLNNKGVDYFEEHFKEGFSTYLTNTAGRTFNPPVTFNAIPVAFSDFVNSVSKGELDFTYCNPTLFSCIESGEEM----AP-LLTVRNFRLGHELTVFAGVIFTAASRDDINTLEDVRGKRLSGVSMTSLGGFQMQYGMLHVAGIELMTDFAMVAFSSNHRQTVHDVLEGAADIGFVRTDTIEGMIASGAIEADSLKVLNARESLTPEGTKFPFVHSTPLYPEWPFGAHPSVDWQVQEAVMKALQSLNASSPTSVQGQYAEWQPGFSYISLR 302
BLAST of mRNA_L-elsbetiae_contig69.15666.1 vs. uniprot
Match: A0A7S0GWB4_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0GWB4_9EUKA) HSP 1 Score: 162 bits (411), Expect = 2.090e-45 Identity = 90/266 (33.83%), Postives = 140/266 (52.63%), Query Frame = 1 Query: 19 VGGLAITGAEAFLNSFGPTFSDYLNQTVGEVF-PGVGFVAVPLAFEDVWPAVSSATVDFLFLNPSSASCMERQEAIHEFGAPAILSLRNFRQGNELNAFGGVLITAANRTDITDIMHLKDKIVEGVSITGLGAFQLQWGLLQDAGFNLMADPSELRLAYNQKKIVRDVIDGSVDVGFVRTDMVERMD-----------------------------AADLVPEWPLQVLPHVPAELSKEVVRALLGLNQTHEAAVAGKYSTWDAPL 726 +GGLA GA F+ F PTF DYLN+ V F + F +PL+ +++ AV VDFLF NPS SC+E + I GA ++R R G++++ GGV+ A+R DI +++ ++ KI+EG ++ L + QW + M PS+LR ++Q + DV+ G VD+G +RTD++E M + L PEWP +L H ++S+ VV AL+ +++T ++ G Y+TW APL Sbjct: 32 IGGLANHGANNFVKQFKPTFVDYLNREVSSYFLTPISFEILPLSSTEIYTAVEKKQVDFLFCNPSIFSCLESENGI-AVGA----TIRQLRLGHQISVSGGVIFARADRHDINELVDIEGKILEGEELSSLSGSKTQWETFFLNNISYMNWPSQLRFGHSQNNTIYDVLSGKVDIGLIRTDLLEEMKTEGKINIDDIKIIHHVNYTVDQHGFPFELSTHLYPEWPFSILEHTDWQVSQHVVEALMRIDETMNQSIIGGYATWQAPL 292
BLAST of mRNA_L-elsbetiae_contig69.15666.1 vs. uniprot
Match: A0A7S3X170_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3X170_9SPIT) HSP 1 Score: 159 bits (403), Expect = 5.450e-45 Identity = 91/200 (45.50%), Postives = 124/200 (62.00%), Query Frame = 1 Query: 1 ENITYRVGGLAITGAEAFLNSFGPTFSDYLNQTVGEVFPGVGFVAVPLAFEDVWPAVSSATVDFLFLNPSSASCMERQEAIHEFGAPAILSLRNFRQGNELNAFGGVLITAANRTDITDIMHLKDKIVEGVSITGLGAFQLQWGLLQDAGFNLMADPSELRLAYNQKKIVRDVIDGSVDVGFVRTDMVERMDAADLVPEW 600 +N ++GGLAI+GA AF +SF P FS+YL TV G+ F A+PL F+ + +VS VD+++ NP+ + C+ + EFG ++ SL N+R GN L+ F GV+ + A+ ++ + + L+ VE VSI GLGA QLQ L G N+M D L AYNQ KIVRDV DG DVGFVRTDM++R A V EW Sbjct: 36 QNCRVQIGGLAISGAAAFSSSFNPVFSEYLT-TVLNASRGLEFEAIPLDFDQTFASVSGVDVDYIYSNPAVSVCL-----MVEFGVMSVGSLLNYRAGNSLDKFAGVIFSRAD-SNFSTVEDLRQARVEAVSIAGLGAMQLQQAALLQQGINIMTDVHRLEFAYNQGKIVRDVRDGFADVGFVRTDMIDRQVLAGNV-EW 227 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig69.15666.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig69.15666.1 >prot_L-elsbetiae_contig69.15666.1 ID=prot_L-elsbetiae_contig69.15666.1|Name=mRNA_L-elsbetiae_contig69.15666.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=249bp ENITYRVGGLAITGAEAFLNSFGPTFSDYLNQTVGEVFPGVGFVAVPLAFback to top mRNA from alignment at L-elsbetiae_contig69:48491..52561+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig69.15666.1 ID=mRNA_L-elsbetiae_contig69.15666.1|Name=mRNA_L-elsbetiae_contig69.15666.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4071bp|location=Sequence derived from alignment at L-elsbetiae_contig69:48491..52561+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig69:48491..52561+ >mRNA_L-elsbetiae_contig69.15666.1 ID=mRNA_L-elsbetiae_contig69.15666.1|Name=mRNA_L-elsbetiae_contig69.15666.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1494bp|location=Sequence derived from alignment at L-elsbetiae_contig69:48491..52561+ (Laminarionema elsbetiae ELsaHSoW15)back to top |