mRNA_L-elsbetiae_contig69.15663.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig69.15663.1
Unique NamemRNA_L-elsbetiae_contig69.15663.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig69.15663.1 vs. uniprot
Match: D7FPV3_ECTSI (Glutathione S-transferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPV3_ECTSI)

HSP 1 Score: 358 bits (920), Expect = 3.020e-123
Identity = 187/242 (77.27%), Postives = 206/242 (85.12%), Query Frame = 1 
Query:   19 ISLTYFDIPGPAEAIRLAFYVGDVPFEDRRVSRDDFELLKAGRCQLGVWVGWYLPFGQLPILHVDGEVFPQSAAILRYAGKIGGLYPEDPVAAGKVDAVIDCMFDIQAAIRPSIYETNAQRKLGMRKQLSEVTLPLWIGHLERWLERAGSTFFVGNEITIADIVIYTRMKWLRRGVLVGIPSTILQNFGRVRAHSEAVACHPKVSHYYEHGPGKVTGDGAPPLTSSXXXXXXXXLKVPNSGD 744
            I+LTYFDIPGPAEAIRLAFYVG +PF+DRRVSR +F  +K             LPF QLPIL VD EVFPQSAAILRYAGKIGGLYP DP+AA KVDAVIDCMFDIQAAIRPSIYETNAQRKL MRK+LSEVTLPLW+ +LERWLERAG+TFFVG EITI D+VIYTRMKWLRRGVLVGIP TIL+NF RVRAHSEAVA HPKV  YY++GPGKVTGDG+PP+   XXXXXXXX  +P++GD
Sbjct:    4 ITLTYFDIPGPAEAIRLAFYVGGIPFKDRRVSRQEFAKIKRD-----------LPFAQLPILTVDDEVFPQSAAILRYAGKIGGLYPSDPIAAAKVDAVIDCMFDIQAAIRPSIYETNAQRKLSMRKELSEVTLPLWLQYLERWLERAGTTFFVGEEITICDLVIYTRMKWLRRGVLVGIPDTILRNFRRVRAHSEAVASHPKVDDYYKNGPGKVTGDGSPPIXXXXXXXXXXXXTLPSNGD 234
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BLAST of mRNA_L-elsbetiae_contig69.15663.1 vs. uniprot
Match: B1N8E6_9PHAE (Glutathione S-transferase 1 n=1 Tax=Laminaria digitata TaxID=80365 RepID=B1N8E6_9PHAE)

HSP 1 Score: 178 bits (451), Expect = 1.740e-52
Identity = 88/214 (41.12%), Postives = 132/214 (61.68%), Query Frame = 1 
Query:   13 PVISLTYFDIPGPAEAIRLAFYVGDVPFEDRRVSRDDFELLKAGRCQLGVWVGWYLPFGQLPILHVDGEVFPQSAAILRYAGKIGGLYPEDPVAAGKVDAVIDCMFDIQAAIRPSIYETNAQRKLGMRKQLSEVTLPLWIGHLERWLERAGSTFFVGNEITIADIVIYTRMKWLRRGVLVGIPSTILQNFGRVRAHSEAVACHPKVSHYYEHGP 654
            P + L+YFDIP   E +RLA  +    +ED+RVS+++F  +K             LP+ QLP L V G + PQS A +RY GKIGGLY EDP+ A   DA ++ + D+   +RP+++E +  +KL MRK +++  LP W+G+LER L+ AG ++F G +++I DI +  R+ WL+RG L GIP TI+ +F  + A  ++V    K+  Y E GP
Sbjct:    3 PKLILSYFDIPALGEPLRLALAMSGQAWEDKRVSKEEFMAIKPS-----------LPYNQLPTLEVGGTLIPQSLAQMRYIGKIGGLYSEDPIEAAFADAAMEAVIDMHFHLRPTVHEQDPAKKLEMRKAMTDNYLPTWLGNLERALKAAGGSYFAGGKLSIGDIYVVARLNWLKRGALDGIPDTIVDDFPLLSALVQSVMSEEKIVKYLESGP 205
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BLAST of mRNA_L-elsbetiae_contig69.15663.1 vs. uniprot
Match: A0A7S2V6C7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V6C7_9STRA)

HSP 1 Score: 170 bits (430), Expect = 3.250e-49
Identity = 94/217 (43.32%), Postives = 132/217 (60.83%), Query Frame = 1 
Query:    1 MATSPVISLTYFDIPGPAEAIRLAFYVGDVPFEDRRVSRDDFELLKAGRCQLGVWVGWYLPFGQLPILHVDGEVFPQSAAILRYAGKIGGLYPEDPVAAGKVDAVIDCMFDIQAAIRPSIYETNAQRKLGMRKQLSEVTLPLWIGHLERWLERAGSTFFVGNEITIADIVIYTRMKWLRRGVLVGIPSTILQNFGRVRAHSEAVACHPKVSHYYEHG 651
            MAT+  I LTYF +PG A   RLAFYVG V FED  V  +DF+ +K             LP  QLP+L V+G  + +S AILRYAGK+ GLYP DPV A K D +ID +      +  +I E +A++K+ MR++L+  TLP   G+LE  L + G  F +G+++TIAD+ +  ++ WL +G+L GIP + +  F +V+A  EA   H KV+ YY  G
Sbjct:    8 MATT--IKLTYFPLPGRAGYTRLAFYVGGVDFEDVIVKGEDFQAMKDS-----------LPGKQLPVLEVNGVTYCESMAILRYAGKLSGLYPSDPVEALKCDMLIDMIQGAGNKVAATIREPDAEKKMKMREELASQTLPTLFGYLEEQLNKFGGNFCIGDQLTIADLELLIKVTWLTKGILDGIPPSWIDPFTKVKAIVEATKNHEKVAEYYASG 211
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BLAST of mRNA_L-elsbetiae_contig69.15663.1 vs. uniprot
Match: A0A2P4WXS9_9STRA (Glutathione S-transferase n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4WXS9_9STRA)

HSP 1 Score: 170 bits (430), Expect = 6.350e-47
Identity = 94/216 (43.52%), Postives = 137/216 (63.43%), Query Frame = 1 
Query:    1 MATSPVISLTYFDIPGPAEAIRLAFYVGDVPFEDRRVSRDDFELLKAGRCQLGVWVGWYLPFGQLPILHVDGEVFPQSAAILRYAGKIGGLYPED-PVAAGKVDAVIDCMFDIQAAIRPSIYETNAQRKLGMRKQLSEVTLPLWIGHLERWLERAGST-FFVGNEITIADIVIYTRMKWLRRGVLVGIPSTILQNFGRVRAHSEAVACHPKVSHYY 642
            M T P I LTYF+I G AE  RLAFYVG VPFED+R+SRD+F  LK             LP GQ+P+L VDG+V  Q++AILRYAG++GGLYP + P AA KVD V+  + ++   I PS  E+N ++K  MR++L+ VT+P +I  LE  LE+      F  + + + +I +YT ++ +++G+L  +P+T+L N+    A  E VA + +V  +Y
Sbjct:    1 MPTFPSIKLTYFNIAGRAETSRLAFYVGGVPFEDKRLSRDEFIALKGS-----------LPLGQVPVLEVDGQVLTQTSAILRYAGRLGGLYPTNSPFAALKVDEVLHALSELGDQIIPSFQESNPEKKKAMREELATVTIPRYITLLEGRLEKMQQLPIFQSDTVFVHEIALYTWVRMIKQGLLDHVPATLLDNYKFHNATFEKVAANQRVKEWY 205
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BLAST of mRNA_L-elsbetiae_contig69.15663.1 vs. uniprot
Match: A0A061SAH2_9CHLO (Prostaglandin-H2 D-isomerase n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061SAH2_9CHLO)

HSP 1 Score: 164 bits (414), Expect = 6.540e-47
Identity = 88/203 (43.35%), Postives = 124/203 (61.08%), Query Frame = 1 
Query:   25 LTYFDIPGPAEAIRLAFYVGDVPFEDRRVSRDDFELLKAGRCQLGVWVGWYLPFGQLPILHVDGEVFPQSAAILRYAGKIGGLYPEDPVAAGKVDAVIDCMFDIQAAIRPSIYETNAQRKLGMRKQLSEVTLPLWIGHLERWLERAGST-FFVGNEITIADIVIYTRMKWLRRGVLVGIPSTILQNFGRVRAHSEAVACHPKV 630
            L+YFD  G AE IRLAF VG + FED R  R+D+  LK              P+G +P L +   V+ QS AILRYAGK+ GLYP DPV A  VD ++D + D+   ++P++ E + ++K+ MRK L+E TLP W+G+  + +E  GS+ + VG+ +TIAD+ +YT +  L  G+L GIP TI + F +V A  E V    KV
Sbjct:    5 LSYFDFKGVAEPIRLAFAVGGIDFEDHRFQREDWPQLKPKT-----------PYGSVPTLTIGDRVYAQSNAILRYAGKLAGLYPTDPVEALAVDQIVDALEDMFLHVKPTVQEQDEKKKMEMRKVLAEETLPKWLGYFNKHIEENGSSGYIVGDSLTIADLKLYTLIGLLTSGMLDGIPKTIAEPFPKVTALLEKVGADEKV 196
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BLAST of mRNA_L-elsbetiae_contig69.15663.1 vs. uniprot
Match: A0A3C1L1F1_9DELT (Uncharacterized protein n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A3C1L1F1_9DELT)

HSP 1 Score: 164 bits (414), Expect = 8.060e-47
Identity = 92/214 (42.99%), Postives = 126/214 (58.88%), Query Frame = 1 
Query:   19 ISLTYFDIP-GPAEAIRLAFYVGDVPFEDRRVSRDDFELLKAGRCQLGVWVGWYLPFGQLPILHVDGEVFPQSAAILRYAGKIGGLYP-EDPVAAGKVDAVIDCMFDIQAAIRPSIYETNAQRKLGMRKQLSEVTLPLWIGHLERWLERAGST-FFVGNEITIADIVIYTRMKWLRRGVLVGIPSTILQNFGRVRAHSEAV-ACHPKVSHYYEH 648
            + L Y+D P   AE  RLA ++G + FED R +R   + +K             LPFGQLP+L+V  EV  Q+ AI RY G++ GLYP +DP+ A +VDAVID   DI   IRPSI E +  +KL MR Q+ E +LP W+GHL+RWLE  G   F VG  +TI D+ ++  + WLR GVL GIP  I ++   + AH   + +  P  +  +EH
Sbjct:    5 LRLVYWDFPFWRAEVCRLALHLGGIEFEDVRPNRQQSQQMKRDH---------ELPFGQLPVLYVGDEVIAQTGAIARYCGRLAGLYPHDDPLKAARVDAVIDAATDITWLIRPSIREPDPAKKLAMRAQIVETSLPTWLGHLQRWLECHGDQGFVVGESLTIGDLALWRLVGWLRSGVLDGIPENIGEHLPLLMAHQHKIGSIEPIAAWMHEH 209
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BLAST of mRNA_L-elsbetiae_contig69.15663.1 vs. uniprot
Match: A0A7S1XAS3_9CHLO (Hypothetical protein n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1XAS3_9CHLO)

HSP 1 Score: 162 bits (410), Expect = 2.690e-46
Identity = 91/211 (43.13%), Postives = 128/211 (60.66%), Query Frame = 1 
Query:   19 ISLTYFDIPGPAEAIRLAFYVGDVPFEDRRVSRDDFELLKAGRCQLGVWVGWYLPFGQLPILHVD-GEVFPQSAAILRYAGKIGGLYP-EDPVAAGKVDAVIDCMFDIQAAIRPSIYETNAQRKLGMRKQLSEVTLPLWIGHLERWLERAGSTFFVGNEITIADIVIYTRMKWLRRGVLVGIPSTILQNFGRVRAHSEAVACHPKVSHYYE 645
            + LTYF I G AE IRLA   G V FED R+ +  +  LKA             PFG LP LH+D GE   QS A+LRYAGK+GGLYP +D VAA +VD  +    D+Q AIRP+++E + ++K+ MRK L++ T P W+   +  LE  GS F VG  +T+AD+ ++  +  L+ G+L GIP TI + + +++   + VA H KV+ Y E
Sbjct:    1 MKLTYFPIKGVAEPIRLALVAGGVDFEDNRLEQGTWPDLKAST-----------PFGALPTLHLDSGEQLAQSDALLRYAGKLGGLYPKDDDVAAMRVDMWLGAADDVQGAIRPTLFEKDDEKKMAMRKVLADETFPKWLSIFDSQLESNGSGFLVGTSMTVADLKLFCILDNLKSGILDGIPPTITEPYAKLQKLYDTVAKHEKVAAYRE 200
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BLAST of mRNA_L-elsbetiae_contig69.15663.1 vs. uniprot
Match: M4B167_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B167_HYAAE)

HSP 1 Score: 167 bits (424), Expect = 4.870e-46
Identity = 90/216 (41.67%), Postives = 133/216 (61.57%), Query Frame = 1 
Query:    1 MATSPVISLTYFDIPGPAEAIRLAFYVGDVPFEDRRVSRDDFELLKAGRCQLGVWVGWYLPFGQLPILHVDGEVFPQSAAILRYAGKIGGLYPED-PVAAGKVDAVIDCMFDIQAAIRPSIYETNAQRKLGMRKQLSEVTLPLWIGHLERWLERAGST-FFVGNEITIADIVIYTRMKWLRRGVLVGIPSTILQNFGRVRAHSEAVACHPKVSHYY 642
            M+T P I LTYF   G AEA RL FY+G +PFED+R++R+ F  +K              P GQ+P L ++G+V  QS A++RYAG++ GLYP   PV A K+D V+  M +I+A + PS YE++  +K  MR++L+ VTLP + G LE  L++   T FF  + I + ++ IY  +K LR GV+  IP+T+L ++  +    + VA HPKV  +Y
Sbjct:    1 MSTFPSIKLTYFSAAGRAEAARLIFYIGGIPFEDKRITREQFMAMKDT-----------FPLGQVPTLEINGDVMTQSYAMMRYAGRLSGLYPSTRPVLALKIDEVLSVMGEIEARMVPSFYESDVAKKKAMREELTTVTLPRYAGLLEACLQKMKQTPFFQSDRIYVHEVAIYIWVKSLRSGVIDFIPTTVLSSYQLLNEMHDKVANHPKVQEWY 205
[Close]
BLAST of mRNA_L-elsbetiae_contig69.15663.1 vs. uniprot
Match: A0A225VZV0_9STRA (Glutathione S-transferase n=2 Tax=Phytophthora TaxID=4783 RepID=A0A225VZV0_9STRA)

HSP 1 Score: 167 bits (422), Expect = 1.000e-45
Identity = 91/212 (42.92%), Postives = 129/212 (60.85%), Query Frame = 1 
Query:   13 PVISLTYFDIPGPAEAIRLAFYVGDVPFEDRRVSRDDFELLKAGRCQLGVWVGWYLPFGQLPILHVDGEVFPQSAAILRYAGKIGGLYPED-PVAAGKVDAVIDCMFDIQAAIRPSIYETNAQRKLGMRKQLSEVTLPLWIGHLERWLERAGST-FFVGNEITIADIVIYTRMKWLRRGVLVGIPSTILQNFGRVRAHSEAVACHPKVSHYY 642
            P I LTYF   G  EA RLAFY+GDVPFED+R++ + F  LKA            LP GQ+P+L VDGEVF QS AILRYAG++GGLYP   P    K+D V++ M +I+  + P+  ET+ ++K  MR++L+ VTLP + G  E  LE+      F  +++ I ++ IY  +K LR G +  IP+T+L  +  +    + +A HPKV  +Y
Sbjct:    4 PSIKLTYFAAAGRGEAARLAFYIGDVPFEDKRLNHEQFAALKASES---------LPLGQVPVLEVDGEVFTQSHAILRYAGRLGGLYPVTAPYLTLKIDEVLNAMGEIEEKMGPAFRETDQEKKKAMREELASVTLPRYAGLFEARLEKMKQIPAFQSDKVYIHEVAIYAFVKSLRAGYIDYIPTTVLDGYKLLNEAHDKIANHPKVKEWY 206
[Close]
BLAST of mRNA_L-elsbetiae_contig69.15663.1 vs. uniprot
Match: A0A1V9YVC1_9STRA (Glutathione S-transferase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YVC1_9STRA)

HSP 1 Score: 160 bits (404), Expect = 2.350e-45
Identity = 91/211 (43.13%), Postives = 125/211 (59.24%), Query Frame = 1 
Query:   13 PVISLTYFDIPGPAEAIRLAFYVGDVPFEDRRVSRDDFELLKAGRCQLGVWVGWYLPFGQLPILHVDGEVFPQSAAILRYAGKIGGLYPE-DPVAAGKVDAVIDCMFDIQAAIRPSIYETNAQRKLGMRKQLSEVTLPLWIGHLERWLERA-GSTFFVGNEITIADIVIYTRMKWLRRGVLVGIPSTILQNFGRVRAHSEAVACHPKVSHY 639
            P + LTYF+ PG AE  RLA ++ DVPFED R+ RD F   K             LPF Q+P L ++GEVF QS  + RY G + GLYP  DP+ A +VD ++    DI   + PS++E +  +K+ MR++L+EVTLP     LE  L    G  +FVG+ +T+ADI +Y   K L  G L GIP+TI+  + R  A ++AVA HPKV  +
Sbjct:    4 PTLKLTYFNAPGRAELTRLALFINDVPFEDERLDRDQFLARKPT-----------LPFKQVPTLTINGEVFAQSHGMARYVGVLTGLYPSNDPLRAYRVDEILAFSDDIVNKLIPSLFEQDVTKKMAMRRELAEVTLPGLFPLLEARLRATPGGKYFVGDTLTLADIELYCMRKNLTSGHLDGIPTTIIDAYPRWNAIADAVAAHPKVQEW 203
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig69.15663.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FPV3_ECTSI3.020e-12377.27Glutathione S-transferase n=2 Tax=Ectocarpus TaxID... [more]
B1N8E6_9PHAE1.740e-5241.12Glutathione S-transferase 1 n=1 Tax=Laminaria digi... [more]
A0A7S2V6C7_9STRA3.250e-4943.32Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A2P4WXS9_9STRA6.350e-4743.52Glutathione S-transferase n=1 Tax=Phytophthora pal... [more]
A0A061SAH2_9CHLO6.540e-4743.35Prostaglandin-H2 D-isomerase n=1 Tax=Tetraselmis s... [more]
A0A3C1L1F1_9DELT8.060e-4742.99Uncharacterized protein n=1 Tax=Myxococcales bacte... [more]
A0A7S1XAS3_9CHLO2.690e-4643.13Hypothetical protein n=1 Tax=Tetraselmis chuii Tax... [more]
M4B167_HYAAE4.870e-4641.67Uncharacterized protein n=1 Tax=Hyaloperonospora a... [more]
A0A225VZV0_9STRA1.000e-4542.92Glutathione S-transferase n=2 Tax=Phytophthora Tax... [more]
A0A1V9YVC1_9STRA2.350e-4543.13Glutathione S-transferase n=1 Tax=Achlya hypogyna ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig69contigL-elsbetiae_contig69:18877..24792 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score174.1
Seed ortholog evalue8.2e-41
Seed eggNOG ortholog272952.HpaP800014
KEGG rclassRC00004,RC00069,RC00672,RC00840,RC00948,RC01704,RC01705,RC01706,RC01758,RC01759,RC01765,RC01767,RC01769,RC02243,RC02527,RC02939,RC02940,RC02942,RC02943,RC02944
KEGG koko:K00799,ko:K04097
KEGG TC1.A.12.2.2,1.A.12.3.2
KEGG ReactionR02266,R03522,R07002,R07003,R07004,R07023,R07024,R07025,R07026,R07069,R07070,R07083,R07084,R07091,R07092,R07093,R07094,R07100,R07113,R07116,R08280,R09409,R11905
KEGG Pathwayko00480,ko00590,ko00980,ko00982,ko00983,ko01100,ko01524,ko05200,ko05204,ko05225,ko05418,map00480,map00590,map00980,map00982,map00983,map01100,map01524,map05200,map05204,map05225,map05418
Hectar predicted targeting categoryother localisation
GOsGO:0008150,GO:0010033,GO:0014070,GO:0042221,GO:0042493,GO:0045472,GO:0046677,GO:0050896,GO:0097327,GO:1901654,GO:1901700,GO:1904643
EggNOG free text desc.Glutathione S-transferase, C-terminal domain
EggNOG OGs3Q77R@4776,KOG1695@1,KOG1695@2759
EC2.5.1.18,5.3.99.2
COG Functional cat.O
Best tax levelPeronosporales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko02000
Ec32 ortholog descriptionGlutathione S-transferase
Ec32 orthologEc-18_001805.1
Exons7
Model size750
Cds size750
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816764.0950372-CDS-L-elsbetiae_contig69:18876..190511622816764.0950372-CDS-L-elsbetiae_contig69:18876..19051Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig69 18877..19051 +
1691683795.5675979-CDS-L-elsbetiae_contig69:18876..190511691683795.5675979-CDS-L-elsbetiae_contig69:18876..19051Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig69 18877..19051 +
1622816764.1076443-CDS-L-elsbetiae_contig69:19334..194311622816764.1076443-CDS-L-elsbetiae_contig69:19334..19431Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig69 19335..19431 +
1691683795.5816119-CDS-L-elsbetiae_contig69:19334..194311691683795.5816119-CDS-L-elsbetiae_contig69:19334..19431Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig69 19335..19431 +
1622816764.1188564-CDS-L-elsbetiae_contig69:23496..236081622816764.1188564-CDS-L-elsbetiae_contig69:23496..23608Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig69 23497..23608 +
1691683795.5920987-CDS-L-elsbetiae_contig69:23496..236081691683795.5920987-CDS-L-elsbetiae_contig69:23496..23608Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig69 23497..23608 +
1622816764.130226-CDS-L-elsbetiae_contig69:23823..239821622816764.130226-CDS-L-elsbetiae_contig69:23823..23982Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig69 23824..23982 +
1691683795.6031969-CDS-L-elsbetiae_contig69:23823..239821691683795.6031969-CDS-L-elsbetiae_contig69:23823..23982Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig69 23824..23982 +
1622816764.1433556-CDS-L-elsbetiae_contig69:24154..242201622816764.1433556-CDS-L-elsbetiae_contig69:24154..24220Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig69 24155..24220 +
1691683795.6118233-CDS-L-elsbetiae_contig69:24154..242201691683795.6118233-CDS-L-elsbetiae_contig69:24154..24220Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig69 24155..24220 +
1622816764.1553502-CDS-L-elsbetiae_contig69:24391..244521622816764.1553502-CDS-L-elsbetiae_contig69:24391..24452Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig69 24392..24452 +
1691683795.620513-CDS-L-elsbetiae_contig69:24391..244521691683795.620513-CDS-L-elsbetiae_contig69:24391..24452Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig69 24392..24452 +
1622816764.1711037-CDS-L-elsbetiae_contig69:24712..247921622816764.1711037-CDS-L-elsbetiae_contig69:24712..24792Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig69 24713..24792 +
1691683795.6295972-CDS-L-elsbetiae_contig69:24712..247921691683795.6295972-CDS-L-elsbetiae_contig69:24712..24792Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig69 24713..24792 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig69.15663.1prot_L-elsbetiae_contig69.15663.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig69 18877..24792 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig69.15663.1

>prot_L-elsbetiae_contig69.15663.1 ID=prot_L-elsbetiae_contig69.15663.1|Name=mRNA_L-elsbetiae_contig69.15663.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=250bp
MATSPVISLTYFDIPGPAEAIRLAFYVGDVPFEDRRVSRDDFELLKAGRC
QLGVWVGWYLPFGQLPILHVDGEVFPQSAAILRYAGKIGGLYPEDPVAAG
KVDAVIDCMFDIQAAIRPSIYETNAQRKLGMRKQLSEVTLPLWIGHLERW
LERAGSTFFVGNEITIADIVIYTRMKWLRRGVLVGIPSTILQNFGRVRAH
SEAVACHPKVSHYYEHGPGKVTGDGAPPLTSSPPLSPLPPLKVPNSGDD*
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mRNA from alignment at L-elsbetiae_contig69:18877..24792+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig69.15663.1 ID=mRNA_L-elsbetiae_contig69.15663.1|Name=mRNA_L-elsbetiae_contig69.15663.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5916bp|location=Sequence derived from alignment at L-elsbetiae_contig69:18877..24792+ (Laminarionema elsbetiae ELsaHSoW15)
ATGGCCACCTCACCGGTAATATCGCTCACCTACTTCGATATACCTGGTCC
TGCTGAAGCCATAAGACTTGCCTTCTATGTGGGAGACGTGCCGTTCGAGG
ACAGGCGTGTTTCCCGAGATGATTTCGAACTTTTGAAAGCAGGTCGGTGC
CAGCTTGGCGTTTGGGTGGGTTGGTGTGTTACTCACTGCAGTATTTGTTA
GTTCTCATGTAAACGGTCCTGCTTGTACATACATGCATAGCTAAATACAA
TTGTCTTGCTTGACCTTTCTGTGTGGTTTTACACGGTGGGCTACAGCAAC
CAAGGCAAACTGCATTTCCCCTGGAGAGACTTGGAGTACTGCAAAACGTG
CTACTAGCAGCTACAAGAAGACTACAGTCTTGTCTAGATAGATTACGTAC
ATACGCGCGTGGTATAATTCACCACTGCTTGTCGCTGAATCCCCGTGTTC
GCCCACAGATCTGCCCTTCGGGCAGCTGCCTATACTTCACGTGGATGGAG
AGGTTTTCCCTCAGAGCGCTGCAATCCTCAGATACGCTGGCAAGATTGGA
GGACTGTGAGTGCACCAGGTAGATAAACTACTACTAACACTAGATAGAGT
AGACTAGATACATATCTACATATGACCGTAAACTTTAATACCATCTTTGT
ATGTATTGTAGACTATCTATTTATCTGTGTATGTAGACTAGTCTACCCAT
CTATGATATCATATGTACACAGATATCTATAGACAGCAGATATGTATGTT
ACCTACTTCTAAGTATGTAGATAGAAGTCTACATTTGACTTACATCTACG
CAACACGGCACTGAGTGTTGCGTTTGAAACCTAGCTGTGGTCGTGTGGTG
TGATACACACGTGAGAAGCAGCTAGCTGCCTTCCTCCAGGTGGATGGAGA
GGTTTTCCCACAGAACACTGCAATCTTCAGATACGCTGGCAAGATTGGAG
GACTGGTCTGTGAGAGTAGTACATACGAAGTAATATATCTAATCATGTAC
AGAGGTTTTCGGCGGCTTCCGCCGCCACGCTAAATGCGAGCGAGTCCAAA
GATACATGACAAAGTGGTTTGTTGAAATCCCGAAAGCATATTTTATCAAG
AAAACTACATGTGCATACATATAGGTTAGATTGGCATCATCACATGATCA
CTTGGACGATAGTTCCTCCGCACTTTGGATACCATTTTTTCCAAAAACTG
GAAAAAGGTAGGTAGATAAGCAAAGTAGACTTCGACGACCACATCATTTC
TATGCACATGGTATCATCTGTCTCCCACTATACACACGTATAAAACCCCG
AATATAGTCCCATACACAAGATGACAACACTATTATCTTGTTGAGCCTGC
TAGCACTACATAGCAGGGGAGGTATCACTGTTGTACCTGTGCCCAGGATA
AGTAAGACACAACACACACACGGTAAGAGAAATACATTACACTACAATAT
CACTGCGGTTGCTACGCAGCGCCCCCAAAAAGTGGTGCGTTGCTTCCAAA
ATTACTCGGACCCTCGTCCGAGCTCTGTTAAACGTGTGGGTATCCATCCG
TAACAAAAAAAATGGCCACGAACACTGACTGTTGATTGAGGGGATCTGAA
ACACCGTCACGGCACACAAAGGAAGAGGCATTTTATCTGCGCGCGTGTTT
TACCGACCAGTAGAGGAATAAGGGGGTTCATTAACATGTTGCAAGCTGCA
AACACAGCCCACAAAGAGAGAAGACAACAGCCCCCCCCAAGAAAGAGGTA
GATTCGTCGGCGGCTTATTCCGCCTCGACGCGCGGAGTGCAATAAAAAGC
TCCCCAAGCCATACAAGTACAACATATTTACACAGTAGTGAACCGTGCGT
GAACCAAAGAGTGGGTCCGAATTGAGGTGAGGACAGACAGGGGCAGGAAA
AGCAGACATCCACGCGGACAGACAGAACCACGAGGACGCATAGAGAGGAG
AGAAAGAGCGAGAGAGAGGCGTAGAGAGCGATAGAGCAGGATCGCGGCGA
CTTTGATATGAAAATTGATATTCCGAGTCTCATTTCAAGTGCAACGTGTG
TACGTGGAGCAGAGTAACAAAAGGGGACAGGGGCAGACAGAGAGCCGGAG
AGAGACAGAAACACACAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGCG
AGTAGAGACACAGCAAGAGAGACAGGGAGGCAGAGACCGACCCGCCTGAC
GAAACATTCTACAGAGTAAAAATCCATTCGGTCTGTAGCGAGAGAGAGCG
AGAGAGGAGCGAGCACACAGGCCAGGAAGGAGAAGAGTGAACAGATAAAG
CAAAGCGAGATGGAGGGAGGGACAGAGATAGAGAGCCACCGACTGAGAGC
GGAGAGCGCAAACCCGATTGAAAAGGCCACACGGCGGCAAAAATGCGAAA
TTGGAACAGAACGCTCTTAGGGCACAAGAGCGTTTTCGGCGACTGCAACA
AACTCTAAATCCAAGTGAATAAGCGTGCTGCTCTCTGGAGAGCCCAAAGA
GAAGCCGCAGAAATTCTGAGAATGGTACCATCTGTGTCAATGATAATTGA
TACAAGCGTTATGTACGCCGTATACACCAACATAGCACTTGAGTGTTTAC
GTTTGAAACTTAGCTTAGGGCGTGTGGTGTGGTACACGTTAGACCCATGT
TTATGGTCAGAAAATGTTCAAAAAATGTCTGGATATGTTGTCAAACATTT
TGGGAGAACATTTACCGAAGGAAGATTTTCGAGGCGCTTTTTATGGGAAA
CAAAATAATATCTTGGTGTTTCGTGCAATTGCACCCCGATTGCGGCGGGA
CCTCTGATCTACTGCGGTCAAACGAGTCGTGGCAGACAAATCACAAATAC
GCCATGAATACTGGACGTAACGAGATCATAAAGGGCTCGCGGCAACTGTA
GCATCTCTGTGCCGGTAGCTCGGCCGCCGATCTTTGGCAGAAGCTCACCA
GACGCGCGAGAAAAATTATTTCATTTCGTGTGTCAAAATAACACAGAGGC
GTGCGTCATCGGTTCAGAACCGTAGAACACACCTATTTGAGAGCACAAGA
CTACAACCATACCCAGCTCTCATCGGCTAGAACATGAATTCAAGTTCGGT
CTTCTTGGTTGTCACCTCCACTCACTGCTTTCATTCGGGTGGGCGTGGGC
TGGCAGTGCGCCTTCTCAATCGACAGCGAGGCGCATCGCCGTGCGCACAA
AGTTGTCAAAAAAACAAAGTGCGGACCTTTTTTTTCACTTGAATACAGAG
AGGTTGTTTCCCCGGCTGAAAAAAACTCCCGAACACACTCGAGTACACGG
CGATGCGCCTCGCTACCGATTGAGAAGTCCCACGCCCAAGCCACGCCCAC
CCTAGAAAGCAGTGAGTGTAGCTGACATAGAAAAATACCGAAGTGGAATT
CATCATCTAGGGGATGATATCTGGTTAGTTTTGTGGTCACGTCTCTGCTT
TTCTCGCCGTTCAGAGATCCACAGGAGGTTATCTCCGTACCTTCTACACC
CATCCTGCCTGTTTTTATTTTTCTCGCACGCTTGACGAGCGCTTGCCTCA
TTTCAATTGCCGGCATGTTGAGACAGTGCCTCTAGGCTTCTTTGGGGCCC
TCTATGAGGTTGCCACGTTCAGTATTCATCGCGCAGTGGTTGGTTTGGGG
AACATTTTCGCAAGGTGCCCGGTTCGAAAATGTTCCCCAAACATTTGCTT
GAGAGAGCAACATTTGGCCCATCTGGAAATCTTTGACAACATTTTGCCAA
AGATTTGCTCCCATAGAAAGCGTGCAAAAAATGTTTTTGGCAAAATGTTT
AAAATATGAAGATATTTGACAACATTTTCGGGCCATAAACATGGGTCTTA
CATGGACCAAGGTCAAAATCGTTTTGTTTTGCTGAGAACCCGAGAATCTC
ACGAAAGAGGGGCTTAAACAGGAGATAAAAAGCGTTGATATTGTAGTGTA
TAGCCGGCGAGATAACCCATTCCTGTATCTAAATATTTATCTTTGGTCTC
GGGGAAAGGAACCCTTCTGTGTGACCACGGTTCAGTACTCCGGCAAGATG
CCCTCATGACAAGGAGCCCATCGAGCACGAGCAATAAATGTGTATGAAGA
AGAAATTAATAAATACGTACGAAGTTGTTTATATTAATCTAATCAACGGC
TCCACGAAAATGTGAAACACCGTCCGCTCATCCATCCCGCAAGCGTCTGG
CTACATATGTACGCTATACATCATAATTCAGAAGAATACGGTTTTTTGTC
GAGCAGTTGATCAATTTAGAGAGGCGGCCGCCTTTGTATGTGAAAAAGAA
AAACATTGGCCGGATTGTTTTGGAGCCCCCCCCTCCAACCAAGTGGGGAT
ATGGCCGAGGGAGAGGGGGAGAGGTTGGGGCCGTCCCTACACACACCAGG
TGGTTCATATCATCCTCTCGATTCCTGAGGTGCGCAGTAACCCCAACCTG
GCCGGCTTGCGAATCCATGTAGTCTACCTACACTTTTGTTCGGCTACCCG
CGGGGAGCTTCAACCTCCCCCGTGCGGGGTTGCTACTTCACCCTCTCGGC
ATCACATTGTCGGCTTTGTACATATGAAAAGCGCCGTATTCACAGTCATC
TACCCCTGCGTCTGTACCAGGTACCCGGAAGACCCGGTAGCAGCAGGCAA
AGTCGATGCTGTGATAGACTGCATGTTCGACATCCAGGCGGCGATCCGAC
CTTCGATATACGAGACGAATGCGCAACGAAAGGTGATCCAACTTGTCACA
ACCCGGACTCTGTAGCGGTTGTCCACGGTATCCGTGCACGCACTCTCCTC
TGCGCAATACCCGCCTCTCGTGAGAGCCACACGTTGCGTGTGGGTGCCGA
GCGTTGTTGATTGTTTTTTTCTGGCCGCAGTTATGTTCGATTCAGCAGTC
GTCTCATCGAGTCGTTTTTGTCGTCTGTCCCCTTTTCTCGGAAACAGCTG
GGCATGCGAAAGCAGCTGTCAGAGGTAACTCTGCCGCTGTGGATTGGCCA
CCTGGAGCGATGGCTAGAGCGGGCGGGAAGCACGTTTTTCGTCGGCAACG
AGATAACCATCGCAGATATTGTCATCTACACCAGAATGAAGTGGTTGAGG
CGTGGGGTGAGGTTTTTGATAGGTCTTTGCAAGTCTAAGTTTTCTTCCGT
AGGCCACCTGTCGGAACAGACCCAATCTGCGTACTCATTCTAGATAGGTA
AAGTTTTGCAGAGACATGAAGACGTATGGCGCGCCTTTCACCTCCTTCTA
CTCGTGCGTCCGGTCACGTCCGATGCAGGTGCTCGTTGGGATCCCCAGCA
CAATACTGCAAAATTTCGGGAGGGTGCGAGCTCACTCCGAAGCGGTGAGT
CGCAAAGAGCCAGTTTGGCCGTATCCCCCTCCAATAGTGCGACGACGCCC
ACAACCCCCCTAATTTTATTTTCTGGATCTTGATCGAGTCTCGTCATCGA
TCTCGATTGGCGTAAAACGTAAACCCATTTGTTGCATACGGCCGCCCTCT
ATCTGGCCGTTACAGGTCGCTTGCCACCCGAAGGTCTCTCATTACTACGA
ACACGGACCAGGGAAGGTCACGGGAGGTGAGTGCATGAAGGCGTCCAAGC
CGGCGCTGGCCGGATTCCGATAAGTAGGCTAGGGGCGGGCGGTTGTACGG
TGACCTATCTTGATCTCCAACAGATTTTCTTCTAATTCATCGTGCCTACA
TACATACCAGTACTCGTTCTCTATGTCTGTTGTCGCCGAATCTCTGAAAA
CTAAGGTGACCTTGCAGCGTTCAGACACCCCGCCCTCCCTCCCTCCCTCC
CTGCGCTCTGGCCACACTGTGCCGTAAATTTCACAGACGGTGCTCCACCG
CTCACCAGTTCGCCACCACTCTCGCCACTTCCGCCACTGAAAGTCCCCAA
CAGCGGCGACGATTGA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig69:18877..24792+

>mRNA_L-elsbetiae_contig69.15663.1 ID=mRNA_L-elsbetiae_contig69.15663.1|Name=mRNA_L-elsbetiae_contig69.15663.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1500bp|location=Sequence derived from alignment at L-elsbetiae_contig69:18877..24792+ (Laminarionema elsbetiae ELsaHSoW15)
ATGGCCACCTCACCGGTAATATCGCTCACCTACTTCGATATACCTGGTCC
TGCTGAAGCCATAAGACTTGCCTTCTATGTGGGAGACGTGCCGTTCGAGG
ACAGGCGTGTTTCCCGAGATGATTTCGAACTTTTGAAAGCAGGTCGGTGC
CAGCTTGGCGTTTGGGTGGGTTGGTATGGCCACCTCACCGGTAATATCGC
TCACCTACTTCGATATACCTGGTCCTGCTGAAGCCATAAGACTTGCCTTC
TATGTGGGAGACGTGCCGTTCGAGGACAGGCGTGTTTCCCGAGATGATTT
CGAACTTTTGAAAGCAGGTCGGTGCCAGCTTGGCGTTTGGGTGGGTTGGT
ATCTGCCCTTCGGGCAGCTGCCTATACTTCACGTGGATGGAGAGGTTTTC
CCTCAGAGCGCTGCAATCCTCAGATACGCTGGCAAGATTGGAGGACTATC
TGCCCTTCGGGCAGCTGCCTATACTTCACGTGGATGGAGAGGTTTTCCCT
CAGAGCGCTGCAATCCTCAGATACGCTGGCAAGATTGGAGGACTGTACCC
GGAAGACCCGGTAGCAGCAGGCAAAGTCGATGCTGTGATAGACTGCATGT
TCGACATCCAGGCGGCGATCCGACCTTCGATATACGAGACGAATGCGCAA
CGAAAGGTACCCGGAAGACCCGGTAGCAGCAGGCAAAGTCGATGCTGTGA
TAGACTGCATGTTCGACATCCAGGCGGCGATCCGACCTTCGATATACGAG
ACGAATGCGCAACGAAAGCTGGGCATGCGAAAGCAGCTGTCAGAGGTAAC
TCTGCCGCTGTGGATTGGCCACCTGGAGCGATGGCTAGAGCGGGCGGGAA
GCACGTTTTTCGTCGGCAACGAGATAACCATCGCAGATATTGTCATCTAC
ACCAGAATGAAGTGGTTGAGGCGTGGGCTGGGCATGCGAAAGCAGCTGTC
AGAGGTAACTCTGCCGCTGTGGATTGGCCACCTGGAGCGATGGCTAGAGC
GGGCGGGAAGCACGTTTTTCGTCGGCAACGAGATAACCATCGCAGATATT
GTCATCTACACCAGAATGAAGTGGTTGAGGCGTGGGGTGCTCGTTGGGAT
CCCCAGCACAATACTGCAAAATTTCGGGAGGGTGCGAGCTCACTCCGAAG
CGGTGCTCGTTGGGATCCCCAGCACAATACTGCAAAATTTCGGGAGGGTG
CGAGCTCACTCCGAAGCGGTCGCTTGCCACCCGAAGGTCTCTCATTACTA
CGAACACGGACCAGGGAAGGTCACGGGAGGTCGCTTGCCACCCGAAGGTC
TCTCATTACTACGAACACGGACCAGGGAAGGTCACGGGAGACGGTGCTCC
ACCGCTCACCAGTTCGCCACCACTCTCGCCACTTCCGCCACTGAAAGTCC
CCAACAGCGGCGACGATTGAACGGTGCTCCACCGCTCACCAGTTCGCCAC
CACTCTCGCCACTTCCGCCACTGAAAGTCCCCAACAGCGGCGACGATTGA
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