prot_L-elsbetiae_contig6896.15658.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig6896.15658.1
Unique Nameprot_L-elsbetiae_contig6896.15658.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length242
Homology
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BLAST of mRNA_L-elsbetiae_contig6896.15658.1 vs. uniprot
Match: A0A6H5KU31_9PHAE (USP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU31_9PHAE)

HSP 1 Score: 330 bits (845), Expect = 2.300e-100
Identity = 157/191 (82.20%), Postives = 179/191 (93.72%), Query Frame = 0 
Query:    3 RVWTGSAGVERVFFGGIWRVPGHTQATPKTFLEQRSSQRVVHFMGRTERDGVLLPQGSMTQDGRAPGVTVELPRTASHREILETLSRRLELVDNPLQIRISAMTAGGKPQSFPTRVHLSDLDLIQFSLHRILDVNQGIQHNHTILFEVLPFPLDQLTPSTTVVEAYASDALLKAHCLARMEEEPYIKIARR 193
            RVWTG AG++RV FGGIWRVPGHT  TPKTFLEQRS+QRVVHFMGRTERDGVLLP+GSMT+DGR PGV+VELPRTASHREILETLSRRLELVD+PL +RISAMT GGKPQSFPTRVH+SDLDL QF+LH+ILDVNQG  H+HTILFE+LPFP++QLT +TT+VEAY+SDA+LK HCLARMEEEP++K+ARR
Sbjct: 1238 RVWTGKAGIDRVLFGGIWRVPGHTD-TPKTFLEQRSAQRVVHFMGRTERDGVLLPEGSMTEDGRMPGVSVELPRTASHREILETLSRRLELVDDPLLLRISAMTTGGKPQSFPTRVHMSDLDLPQFALHKILDVNQGAHHHHTILFELLPFPMNQLTAATTLVEAYSSDAVLKTHCLARMEEEPFMKLARR 1427
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BLAST of mRNA_L-elsbetiae_contig6896.15658.1 vs. uniprot
Match: D8LL31_ECTSI (USP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL31_ECTSI)

HSP 1 Score: 305 bits (781), Expect = 4.180e-92
Identity = 145/177 (81.92%), Postives = 165/177 (93.22%), Query Frame = 0 
Query:    3 RVWTGSAGVERVFFGGIWRVPGHTQATPKTFLEQRSSQRVVHFMGRTERDGVLLPQGSMTQDGRAPGVTVELPRTASHREILETLSRRLELVDNPLQIRISAMTAGGKPQSFPTRVHLSDLDLIQFSLHRILDVNQGIQHNHTILFEVLPFPLDQLTPSTTVVEAYASDALLKAHCL 179
            RVWTG AG++RV FGG WRVPGHT+ TPKTFLEQRS+QRVVHFMGRT+RDGVLLP+GSMTQDGR PGV+VELPRTASHREILETLSRRLELVD+PL +RISAMT GGKPQSFPTRVH+SDLDL QF+LH+ILDVNQG  H+HTILFE+LPFP++QLT +TT+VEAY+SDA+LK HCL
Sbjct: 1219 RVWTGKAGIDRVLFGGTWRVPGHTE-TPKTFLEQRSAQRVVHFMGRTDRDGVLLPEGSMTQDGRMPGVSVELPRTASHREILETLSRRLELVDDPLLLRISAMTTGGKPQSFPTRVHMSDLDLPQFALHKILDVNQGAHHHHTILFELLPFPMNQLTAATTLVEAYSSDAVLKTHCL 1394
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6896.15658.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KU31_9PHAE2.300e-10082.20USP domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LL31_ECTSI4.180e-9281.92USP domain-containing protein n=1 Tax=Ectocarpus s... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6896contigL-elsbetiae_contig6896:3097..8369 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6896.15658.1mRNA_L-elsbetiae_contig6896.15658.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig6896 3097..8370 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig6896.15658.1 ID=prot_L-elsbetiae_contig6896.15658.1|Name=mRNA_L-elsbetiae_contig6896.15658.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=242bp
NGRVWTGSAGVERVFFGGIWRVPGHTQATPKTFLEQRSSQRVVHFMGRTE
RDGVLLPQGSMTQDGRAPGVTVELPRTASHREILETLSRRLELVDNPLQI
RISAMTAGGKPQSFPTRVHLSDLDLIQFSLHRILDVNQGIQHNHTILFEV
LPFPLDQLTPSTTVVEAYASDALLKAHCLARMEEEPYIKIARRRKKAQAQ
REAASQAAASEAAAAAAAAAAAEEEEANGADRGQAGGEGKSA
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