mRNA_L-elsbetiae_contig6891.15653.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig6891.15653.1
Unique NamemRNA_L-elsbetiae_contig6891.15653.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig6891.15653.1 vs. uniprot
Match: D8LCT7_ECTSI (B30.2/SPRY domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCT7_ECTSI)

HSP 1 Score: 245 bits (626), Expect = 2.360e-76
Identity = 120/133 (90.23%), Postives = 126/133 (94.74%), Query Frame = 3 
Query:  267 ISLPPGGTVSLGVSRRPPPDDESGELLARTKLGDGEKTWGFCTSDGGAAATLKEGDVIGVALDFTDLPMLFFTLGGAPLGQGDELAVMRIRGTVYPAFGVGGGAALSVTFAADSLAQTPPRKCEALIVGQDMM 665
            ++LPPGGTVSLGVSRRPPPDD SGELL+R+KLGDGEKTWGFCTSDGGAA TLKEGDVIG+ALDFTDLPMLFFT GG PLG+GDELAVMRIRGTVYPAFGVGGGAALSV FA DSLA TPPRKCEALIVGQDMM
Sbjct:    1 MTLPPGGTVSLGVSRRPPPDDASGELLSRSKLGDGEKTWGFCTSDGGAAGTLKEGDVIGIALDFTDLPMLFFTRGGDPLGEGDELAVMRIRGTVYPAFGVGGGAALSVAFAGDSLAHTPPRKCEALIVGQDMM 133
[Close]
BLAST of mRNA_L-elsbetiae_contig6891.15653.1 vs. uniprot
Match: A0A7S4Q9N0_9DINO (Hypothetical protein n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4Q9N0_9DINO)

HSP 1 Score: 113 bits (282), Expect = 3.710e-25
Identity = 71/160 (44.38%), Postives = 92/160 (57.50%), Query Frame = 3 
Query:  189 ATLSGSGLVLGCAPVEQDSAYWEATVISLPPGGTVSLGVSRRPPPDDESGELLARTKLGDGE-KTWGFCTSDGGAAATLKEGDVIGVALDFTDLPMLFFTLGGAPLGQGDELAVMRIRGTVYPAFGVGGGAALSVTFAADSLAQTPPRKCEALIVGQDMM 665
            AT+SGSG+VLG A VEQD+AYWE  V+SLP GG+  +GV+R+  P D +     R     G  ++W   +     +A+L EGDV+GVA    +LP L F   G PL  G   +V  IRGTV PAF V GGA LSV F  D     PP +   LI  + ++
Sbjct:   61 ATVSGSGVVLGGAEVEQDAAYWEVRVVSLPEGGSCCMGVARQTVPLDAALSAPMRPGAEAGAAQSWALSS----LSASLMEGDVVGVAFGLGELPNLRFFCNGEPLEVG---SVTHIRGTVCPAFSVHGGAVLSVAFERDGFRYPPPARFTELIPTRSLL 213
[Close]
BLAST of mRNA_L-elsbetiae_contig6891.15653.1 vs. uniprot
Match: A0A7S4QBI5_9DINO (Hypothetical protein n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4QBI5_9DINO)

HSP 1 Score: 111 bits (277), Expect = 2.160e-24
Identity = 73/172 (42.44%), Postives = 96/172 (55.81%), Query Frame = 3 
Query:  192 TLSGSGLVLGCAPVEQDSAYWEATVISLPPGGTVSLGVSRRPPPDD---------ESGELLARTKLGDG-----EKTWGFCTSDGGAAATLKEGDVIGVALDFTDLPMLFFTLGGAPLGQGDELAVMRIRGTVYPAFGVGGGAALSVTFAADSLAQTPPRKCEALIVGQDMM 665
            T+SGSG+VLG A VEQD+AYWE  V++LP GG+  +GV+R+  P D         +   L A T L +        +W   +    A+A L EGDV+GVA    +LP L F   G PL +G   +V  +RGTV PAF V GGA L+VTF  D    TPP K   LI  + ++
Sbjct:   56 TVSGSGVVLGGAEVEQDAAYWEVRVVTLPEGGSCCMGVARQSVPLDAPLVAPARPDPEVLGAATDLAEAGAAPASVSWALSS----ASALLNEGDVVGVAFGQGELPNLRFFCNGEPLERG---SVAHVRGTVCPAFSVHGGAVLTVTFEHDGFRYTPPAKFTELIPMRSLL 220
[Close]
BLAST of mRNA_L-elsbetiae_contig6891.15653.1 vs. uniprot
Match: F0Y3A2_AURAN (SPRY domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y3A2_AURAN)

HSP 1 Score: 89.0 bits (219), Expect = 7.590e-17
Identity = 66/168 (39.29%), Postives = 83/168 (49.40%), Query Frame = 3 
Query:  162 VVLQSQGRPATLSGSGLVLGCAPVEQDSAYWEATVISLPPGGTVSLGVSRRPPPDDESGELLARTKLGDGEKTWGFCTSDGGAAATLKEGDVIGVALDFTDLPMLFFTLGGAPLGQGDELAVMRIRGTVYPAFGVGGGAALSVTFAADSLAQTPPRKCEALIVGQDMM 665
            V ++S      L GSG+      +EQD+AYWE  V +    G   +GV R      E GE     +LGDG+ +W   +    AAA   EGDVIGVA    +LP L F L G  L  G    V RIRG V+PA  V GGA L   F   +    PPR   AL V Q+++
Sbjct:   36 VSVESSATGDALGGSGVAYTSTAIEQDAAYWELHVEAA---GPFRVGVCR------ELGEAQLGGELGDGQTSWALDS----AAAGAVEGDVIGVAFGQAELPNLSFFLNGELLEHG---MVNRIRGEVFPAASVTGGAKLRCVFDEANFEHAPPRTHSALRVTQNII 187
[Close]
BLAST of mRNA_L-elsbetiae_contig6891.15653.1 vs. uniprot
Match: A0A7S2CN07_9STRA (SPRY domain-containing protein 7 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CN07_9STRA)

HSP 1 Score: 87.0 bits (214), Expect = 5.860e-16
Identity = 55/162 (33.95%), Postives = 83/162 (51.23%), Query Frame = 3 
Query:  180 GRPATLSGSGLVLGCAPVEQDSAYWEATVISLPPGGTVSLGVSRRPPPDDESGELLARTKLGDGEKTWGFCTSDGGAAATLKEGDVIGVALDFTDLPMLFFTLGGAPLGQGDELAVMRIRGTVYPAFGVGGGAALSVTFAADSLAQTPPRKCEALIVGQDMM 665
            G    ++G G+ L  AP+EQD+AYWE  V      G + +GV+R+    +      A  K  +G ++W  C       A L++GDV+GVA    DLP L FT  G  +   D   V +I GTVYP   +GGGA++   F  + +   PP   + L+V + ++
Sbjct:   57 GESLCITGDGVALASAPIEQDAAYWEIHVTKT---GLIKVGVARKMNRGELDKTFDASAKDENG-RSW--CLDGTDTRANLEDGDVVGVAFTQADLPNLSFTKNGKAINFAD---VKKIPGTVYPVVMIGGGASIEAVFDPEKMNNQPPPTFKPLMVVRSIL 209
[Close]
BLAST of mRNA_L-elsbetiae_contig6891.15653.1 vs. uniprot
Match: K0T616_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0T616_THAOC)

HSP 1 Score: 72.0 bits (175), Expect = 1.620e-10
Identity = 82/260 (31.54%), Postives = 110/260 (42.31%), Query Frame = 3 
Query:   36 MGCCESIMRVVLGGGSDSGKQEVEMQSKTA-----PTLSTTLKSKDVVVLQSQGRPATLSGSGLVLGCAPVEQDSAYWEATVISLPPGGTVSLGVSRRPPPDDESGELLARTKLGDGEKT-----WGFCT--------------SDGGAAAT-------------LKEGDVIGVALDFTDLPMLFFTLGGAPLGQGDELAVMRIRGTVYPAF----GVGG--------GAALSVTFAADSLAQTPPR-KCEALIVGQDMM 665
            MG C S    + GG   SG+   EM ++ +     P      ++     +  QG    +SGSGL L   PVEQD+AYWE  V S+P G T   G        DE G+L       DGE+      +G  T               +G  A++             L+ GDVIGVAL  +DLPM+   L G PL    E  + R RGTVYPA     G GG        G +L+  F  D   +  P  +   L+V Q ++
Sbjct:    1 MGACCSCFDAITGG-KHSGESSQEMTTRNSARGVPPASHGLSRAMSAPTISIQG--FKVSGSGLALTRIPVEQDAAYWEIHV-SIP-GQTAPSG--------DEDGDLQDVDVNDDGEEDPYAVKFGVATRKDREFYRSLETVEEEGDQASSRDDGTFLMRPISNLRHGDVIGVALQQSDLPMIQILLNGEPLL---ECIINRFRGTVYPAVYMPAGAGGEGERVDDEGMSLNFVFDEDEFKEMSPHARFGPLLVAQGII 244
[Close]
BLAST of mRNA_L-elsbetiae_contig6891.15653.1 vs. uniprot
Match: A0A1Z5JFB4_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JFB4_FISSO)

HSP 1 Score: 67.4 bits (163), Expect = 2.880e-9
Identity = 62/194 (31.96%), Postives = 88/194 (45.36%), Query Frame = 3 
Query:   42 CCESIMRVVLGGGSDSGKQEVEMQSKTAPTLSTTLKSKDVVVLQSQGRPAT-------LSGSGLVLGCAPVEQDSAYWEATVISLPPGGT--VSLGVSRRPPPDDESGELLARTKLGDGEKTWGFCTSDGGAAATLKEGDVIGVALDFTDLPMLFFTLGGAPLGQGDELAVMRIRGTVYPAFGVGGGAALSVTF 596
            CCE     V          E EM+ + A  +      K + + +    P+        +SG GL L    VEQD+AYWEA  I   PG +  VS GV+ +   D +    +      D + T          +  +K+GDV+G+A+  +DLPM+ F L G PL    +LAV R RG VYPA  +     L+V F
Sbjct:    7 CCEDASAAV---------SETEMKEQKATNI------KSLSISRVMSAPSVDVQDDCKMSGYGLGLVGVAVEQDAAYWEAH-IQHDPGMSQEVSFGVATKK--DQQFYRSMEEQDSADAKGTSLM------RSIKVKDGDVVGIAVQQSDLPMVQFLLNGEPL---HDLAVNRFRGAVYPAIYLPENDGLTVRF 173
[Close]
BLAST of mRNA_L-elsbetiae_contig6891.15653.1 vs. uniprot
Match: B8BUW6_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BUW6_THAPS)

HSP 1 Score: 68.9 bits (167), Expect = 9.940e-9
Identity = 67/213 (31.46%), Postives = 94/213 (44.13%), Query Frame = 3 
Query:   36 MGCCESIMRVVLGG--GSDSGKQE---VEMQSKTA-----PTLSTTLKSKDVVVLQSQGRPATLSGSGLVLGCAPVEQDSAYWEATV----ISLPPGG--------------------TVSLGVSRRPPPDDESGELLARTKLGDGEKTWGFCTSDGGAAA-----TLKEGDVIGVALDFTDLPMLFFTLGGAPLGQGDELAVMRIRGTVYPA 557
            MG C S    + GG  G+DSG  +    EM ++ +     P      ++     +Q QG    +SGSGL L   P+EQD+AYWE  V    +  PP                       +  GV+ R    D +   L +    +G++T    + D G A       L+  DVIGVA+  +DLPM+ F L G PL    E  + R RGTV+PA
Sbjct:    1 MGGCCSCFDGITGGKHGNDSGNSDGKSTEMATRNSIAGVPPPTHGVSRAMSAPTIQIQGYK--VSGSGLALAKIPIEQDAAYWEWHVHLPGLPRPPXXXXXXDEFHDVQMNGESDDPYAIKFGVATR---KDRNFYKLLQNVEDEGDET---SSQDDGTALMRAIPNLRHNDVIGVAVQQSDLPMIQFLLNGEPL---PECTINRFRGTVFPA 202
[Close]
BLAST of mRNA_L-elsbetiae_contig6891.15653.1 vs. uniprot
Match: A0A6T9ZN68_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A6T9ZN68_9STRA)

HSP 1 Score: 59.3 bits (142), Expect = 1.940e-6
Identity = 60/180 (33.33%), Postives = 87/180 (48.33%), Query Frame = 3 
Query:   36 MGCCESIMRVVLGGGSDSGKQEVEMQSKTAPTLSTTLKSKDVVVLQSQGRPATLSGSGLVLGCAPVEQDSAYWEATVISLPPG---GTVSLGVSRRPPPDDESGELLARTKLGDGEKTWGFCTSDGGAAATLKEG----DVIGVALDFTDLPMLFFTLGGAPLGQGDELAVMRIRGTVYP 554
            MGCC S     +G    + + E+  Q +   +++  + S  + V  +      ++GSGL L    +EQD+AYWE   ISLP      T+  GVS +   D +  E L+  +  D E       S+G       EG    D+IG+A+  +DLPML F   G PL    ++AV R RG VYP
Sbjct:    1 MGCCCSCNVDEVG--RTAKESEMVEQDRAQKSINVRMSSPGIKVEDN----LCVTGSGLALIGTALEQDAAYWEYH-ISLPTRKHVDTILFGVSTKR--DRKFYEELSCNEQNDEEAL--PSESNGTDLMRCIEGIQNDDIIGIAMQQSDLPMLQFFHNGEPLY---DIAVNRFRGVVYP 166
[Close]
BLAST of mRNA_L-elsbetiae_contig6891.15653.1 vs. uniprot
Match: B8BT59_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BT59_THAPS)

HSP 1 Score: 59.3 bits (142), Expect = 2.090e-6
Identity = 59/190 (31.05%), Postives = 85/190 (44.74%), Query Frame = 3 
Query:   42 CCESIMRVVLGGG--SDSGKQEVEMQS----------KTAPTLSTTLKSKDVVVLQSQGRPATLSGSGLVLGCAPVEQDSAYWE------ATVISLPPGGTVSLGVSRRPPPDDESGELLARTKLGDGEKTWGFCTSDGGAAATLKEGDVIGVALDFTDLPMLFFTLGGAPLGQGDELAVMRIRGTVYPA 557
            CC  +  ++  G   SD+   E  ++S           +APT+ T++ S   V            G GL L    VEQD AYWE      A V S PP      GVS +   +    ++LA + + + +    F      A + LK+GDV+GV +  +++PM+   L G      D L V R RGTVYPA
Sbjct:    7 CCSCLKGILFSGIEISDNSHSEDLVESIPQVHSIDVSMSAPTIKTSIDSSSEV-----------GGHGLALVDVAVEQDRAYWEFRVKMNACVSSWPP----MFGVSNKR--NAAFYKILAESTIPEEKHGTKFMC----AVSNLKDGDVVGVVVTQSEIPMIQIYLNGEIQ---DGLQVTRFRGTVYPA 172
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6891.15653.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 14
Match NameE-valueIdentityDescription
D8LCT7_ECTSI2.360e-7690.23B30.2/SPRY domain-containing protein n=1 Tax=Ectoc... [more]
A0A7S4Q9N0_9DINO3.710e-2544.38Hypothetical protein n=1 Tax=Alexandrium monilatum... [more]
A0A7S4QBI5_9DINO2.160e-2442.44Hypothetical protein n=1 Tax=Alexandrium monilatum... [more]
F0Y3A2_AURAN7.590e-1739.29SPRY domain-containing protein n=1 Tax=Aureococcus... [more]
A0A7S2CN07_9STRA5.860e-1633.95SPRY domain-containing protein 7 n=1 Tax=Dictyocha... [more]
K0T616_THAOC1.620e-1031.54Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A1Z5JFB4_FISSO2.880e-931.96Uncharacterized protein n=1 Tax=Fistulifera solari... [more]
B8BUW6_THAPS9.940e-931.46Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
A0A6T9ZN68_9STRA1.940e-633.33Hypothetical protein n=1 Tax=Pseudo-nitzschia deli... [more]
B8BT59_THAPS2.090e-631.05Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6891contigL-elsbetiae_contig6891:723..7029 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score90.9
Seed ortholog evalue7.7e-16
Seed eggNOG ortholog44056.XP_009035097.1
Preferred nameSPRYD7
Hectar predicted targeting categoryother localisation
EggNOG free text desc.SPRY domain
EggNOG OGsKOG4030@1,KOG4030@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Ec32 ortholog descriptionConcanavalin A-like lectin/glucanase domain
Ec32 orthologEc-07_006850.1
Exons4
Model size1560
Cds size633
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6891.15653.1prot_L-elsbetiae_contig6891.15653.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig6891 1615..6994 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816763.0027094-UTR-L-elsbetiae_contig6891:722..16141622816763.0027094-UTR-L-elsbetiae_contig6891:722..1614Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6891 723..1614 -
1691683794.7802255-UTR-L-elsbetiae_contig6891:722..16141691683794.7802255-UTR-L-elsbetiae_contig6891:722..1614Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6891 723..1614 -
1622816763.0867705-UTR-L-elsbetiae_contig6891:6994..70291622816763.0867705-UTR-L-elsbetiae_contig6891:6994..7029Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6891 6995..7029 -
1691683794.8462067-UTR-L-elsbetiae_contig6891:6994..70291691683794.8462067-UTR-L-elsbetiae_contig6891:6994..7029Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6891 6995..7029 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816763.0163054-CDS-L-elsbetiae_contig6891:1614..18631622816763.0163054-CDS-L-elsbetiae_contig6891:1614..1863Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6891 1615..1863 -
1691683794.7983167-CDS-L-elsbetiae_contig6891:1614..18631691683794.7983167-CDS-L-elsbetiae_contig6891:1614..1863Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6891 1615..1863 -
1622816763.0317566-CDS-L-elsbetiae_contig6891:2263..24291622816763.0317566-CDS-L-elsbetiae_contig6891:2263..2429Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6891 2264..2429 -
1691683794.8089767-CDS-L-elsbetiae_contig6891:2263..24291691683794.8089767-CDS-L-elsbetiae_contig6891:2263..2429Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6891 2264..2429 -
1622816763.0594425-CDS-L-elsbetiae_contig6891:3524..35381622816763.0594425-CDS-L-elsbetiae_contig6891:3524..3538Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6891 3525..3538 -
1691683794.8217113-CDS-L-elsbetiae_contig6891:3524..35381691683794.8217113-CDS-L-elsbetiae_contig6891:3524..3538Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6891 3525..3538 -
1622816763.0731316-CDS-L-elsbetiae_contig6891:6790..69941622816763.0731316-CDS-L-elsbetiae_contig6891:6790..6994Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6891 6791..6994 -
1691683794.8330584-CDS-L-elsbetiae_contig6891:6790..69941691683794.8330584-CDS-L-elsbetiae_contig6891:6790..6994Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6891 6791..6994 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig6891.15653.1

>prot_L-elsbetiae_contig6891.15653.1 ID=prot_L-elsbetiae_contig6891.15653.1|Name=mRNA_L-elsbetiae_contig6891.15653.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=211bp
MGCCESIMRVVLGGGSDSGKQEVEMQSKTAPTLSTTLKSKDVVVLQSQGR
PATLSGSGLVLGCAPVEQDSAYWEATVISLPPGGTVSLGVSRRPPPDDES
GELLARTKLGDGEKTWGFCTSDGGAAATLKEGDVIGVALDFTDLPMLFFT
LGGAPLGQGDELAVMRIRGTVYPAFGVGGGAALSVTFAADSLAQTPPRKC
EALIVGQDMM*
back to top

mRNA from alignment at L-elsbetiae_contig6891:723..7029-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig6891.15653.1 ID=mRNA_L-elsbetiae_contig6891.15653.1|Name=mRNA_L-elsbetiae_contig6891.15653.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=6307bp|location=Sequence derived from alignment at L-elsbetiae_contig6891:723..7029- (Laminarionema elsbetiae ELsaHSoW15)
GCAAAGAAGGGCAGAAACAGGAAAGAGAGGGTGGGATGGGCTGCTGCGAG
AGCATAATGCGGGTGGTTCTCGGCGGAGGATCTGACAGTGGGAAGCAGGA
AGTGGAAATGCAGTCGAAGACGGCGCCGACGCTGAGCACAACACTCAAAA
GCAAGGACGTCGTGGTGTTGCAGAGCCAAGGCCGCCCAGCTACCCTCTCC
GGCAGTGGGCTGGTTCTTGGCTGCGCGCCGGTTGAGCAGGCAAGACATGG
CTGTCTTTCCCGCATCCGGTAGAACTTTCGTGTCCGTCATCAGCTCCTGT
GCGTGGGGCGGAAGCTGGAGGCTAAGGTCTATTGCTCTACATAGTCTGCT
ACAAATCAGAGATGGAACAGAACAAATCGTTTTTGACCCGAAACGAGAGT
CGATGTGTAGCACCGCCGTATGTACCATATCTATGTATGTACCGTACACT
TCATTCGTTCGACATTCGCCCTGCGACATATGTACAGAGAGCGCATCTCT
GCTATACTTGCTGTCACGGGCTCCTCTAATTTTCTCCCGCCGTTGTAACG
GATATAAATTCACCGAAATGAGGCATGTGTGTGTGTGTGTTGTCCCGCAG
CGACCAGGCGCATTCGTTGCTGCTGCTGTGCGCCACTGCTGCTCTTGCAT
ATGTACAACGATTAGTCTACATGCGCAAGCACACATGATCATGTTGCTTG
CGTGCGTTGATCCCTGCACGCACCAGGCCGTTTGGGCCGTGTCATGCATA
TATCACACACCCTCTGTTGAGTTTGTTGTGGGTTACAAGGGGGCAAAGAT
CTGTTTATTCGCGGCCCATCGAGCACTTGCTGTTGCATCTATGTAGATCA
ACTAAACTTCGAACTGTAGATCTACTCTCTGTAGGTTGAGTTTCGGGCCG
ACCGCTGACGTTGGGTTCGCAATTTTTTCACACCCTGTACAGCTATCGCT
GATCGCTATCGCTATTAAATAGCTGTGTATAGCTGCCCAGGGCATGTAGC
TGTCTGTAGACAGCTAGCTGCGCAGGATATTGAAACAAAAGCTGTCTGCA
CACAGCTAGCTAGCTGCGCAGGGTTTTGAGACAAAAGCTGTCTGTAGACA
GCTAGCTGCGTAGCTTTTCAAACAATAGCTGTCTGCAGGCAGCTAGTTGC
CTGCGCAGCTCCTTGGAACAATAGCTGTCTTAGCTGTCTGTAGAGCTATC
GCCAAGGAGAAAGTCGCGGGGTGAGCGGTGTTGTTGATGGGCGTCAATTC
TTGTCGTGGAAATTCCCGTCAAATCGTGATATGTAGCAGTAACTCTGGTT
TGGTGCAATCTCAGTCAATCATACCCGCGCCGGCCAAGTACTCGTTTTGT
TTGTCGAACATTATGTCAGTGCGATTCCCGATTGCCTTGTCCTCCCCCCC
CTGGTGAATTTGTCTCCCGCGCATGTGTGCATTCGATCCTGGATTATTTT
CCTATTAGAGAGTGGCGAGCTTCGTCTGAAACAAAAAATAACGGAGAACA
ATGCACCAGGGGCACCAACAATTTCAAAATGCCGGAGAGGGCACACACTT
AAACCGCACAGCATGTACACCGATCAGGAAGCGTTGCGCGAGAAGAAACG
TGTTGGTTTATGCACCCTCCTCACGCAGCTTCTCGAAACTAAATAGCCGT
GTAGGTAGCTATAGCTGACGATGGCTGTCTGCAGACAGCTAGCTGCGCAG
GAAATCGAAACATTAGCTGCCTGCGCAGGATTTCGAAACAATAGCTGTCT
GCAAACAGCTAGCTGCTCAGGACTTTGAAACAGCAGCTGTCTGCAGACAG
CTAGCTGCGCAGCTTTTTGAAACGATAGCTGTCTGCTAGACTTTGCAGGT
GAAAGCGATAAAAGCTGAAAAGCTTGTGAGTACCAAACTTTGACGTATCA
CGTTGACGAGGGAAAGGGACAGCTGAACCCTTCTCGCGATAAAAATGAAG
GCAAGAACCGCAGGAGGAAGGTGGGGCAAAAAAATAAAATAAAAAAGAAG
AAAAATCTCCAGTGTTCACCCCCTCCTGTGCGACCCCCGGTTGGTTCTAG
TTGTACAGACCAATGCACTGCAAAGTGTAGTACCTCTACGTACACCGAAA
GGTGTAGTACACGTCTCCACTTGGGGGGACTGCCGCCAAAATAAATGGGA
AGGACACACACACACATACACAGACAGCTGACCGCTATCGTAGCTGTACA
GGGTGTGCAAATTTTGGCCGAATGTGCTAAGAGTTTCGAAACCCCGAGCC
TCAAATCATGCTCGCTTGCATTGTTTCGAGCACACACCGAATATGTACCG
CTGAAGCATGCTATGGTGTTCGGCGCTTGTCACAACAGCTGTAATACCAG
ACGCTGCTGCCCGTTGTCTGCCCTTTGGGACTGCTGACCCGTTCTTGTCT
CCACCAGTTGGCTCGGTTCATGCTCCTCTACATATACCTGTATCTTGGAA
CCTCCCGCCCTGCGATTCTTCCGCGGCTAAGTCTGGGCGGCGTTGTCAAA
TCCCCTCTCGATCTGTGTATGTTACATACATACACCTCCTCGGTTTCGAG
ATGCACGGCATGTCCGCCTGTTGCCTCCGACCGTTCGTCGGTCGTGCAGC
TCCATGTGACCAAGGTATCCAGGGTGTACATATGTATCCGCGTCGTGAAA
ATCAATATTGACACCAACGCGTTGTCGGCACTCTCCCTCCTCTCTACTCC
ACCACCCCTGGCTTCCAACCACAGGACCAAATTCGCGCATGTATATACAC
ATAGCATCATCGGTGCGCCCACGCCAGCGTTGCGCCGCGCAGCTTGTTTA
TTCCTTTTAGAAACAGATAGGAAGCCCGTTGTTATGTACCATACTCATGC
CCCACGAGTAAATACTCCCAGCCCACTTTTCTGTTATGGTCGTGGGAAGC
CAAATACTTCGAAGTTTATATAGAATACAGTCTACATTTAGCGACCGTAT
TCCACCCCGCCGCACCTAGATACCGTAGGTGACATAAGATAAGACACCCC
CTGGACCGATTTTCAAAGCTCAAGTACTCCACAGCAAGCAGAGCGTCAGT
CCAGAAAAGGGCGGCGTTGGAAATATCTCGTCGAGAGCTTTCCGACAATG
TGGCGTTTGTGGTTAGAATCGTAACCGTTGCGGAGTAACCAAGCTTTCAA
TATCGGTCCAGAGGGTGTCTTATCTTATGCCACCTACGGTACGCACCCGG
CCGCCGCTCTTGCGGATAAGTAGGCTTCGAGGAAAGCCAGCCGCCTGACT
TGTTGTTTCGGTTTCGTTTTCTGCTGACTCCTTTCTCTTCCGTTTTTGTT
CTCCCTTAACGTACGAACACCGCCCGCATATGTACCCCCTATCGTACTAC
TGCTGTTTTTCGTTTTTTGTCTCCGGAACGTGGGCCGGCGGGGGACGACG
ATGATCATGCGCGATGGCGGTGACCATCCGGGGTGTCCTCTCGTGTCCCT
CTTGGCTGTCGGAACGACCACCTACCCCCGCGGTGTTGCAGGATTCAGCA
TATTGGTGAGCGACGTGACCAGCCACGGCTCAATTTGCTTTGCCCGCTTT
GTCTGAGGCAACATGCTTCCTGATGCTCTTGACTGCTGTTGCCAGTTTCG
GCTTGCTATGGATGTCTGTCGTGTCGGTTAACCGCCAGGTAAAGAAGGCG
TCGTGGCCGGGCACGAAACTTCAATTAATACTTATCTCGTCCAGCGGTCC
AGGAAACCTTGAGGAGCATGATGAGTTGAGACTTCTGAGACGTGCACTTT
TTAGTGTCTTGGCCTCTCGAATAGGTGACCACTTCGTTGACAGCAATCAG
GCAACCGCCGCCGGGTGCGACGCGACAACCGCTGCCTGTTTTCGGTAATG
GAAGTTGGCCGGCAAAGCTGCATGTCGCAAAAACCTCTGGCGTGTAGGGA
AAAGAGCAGCTGCTGTTGCACACGCTCGTATATATCTATTTTTCTCCACA
TGAGAGCGATCGTACAGCAGTTATATGTATGGCCCGTGCACAACAAATTG
TCCAAAACATTCCAGCCACGGATGACAACTTTTCTCTGCATACATGTGGT
CGTTCGGAAATCTGAAAGTACCGGCAAATGCCCTGTCTCCAGGCGCATCT
CGTGACCGGGAGTTTTTTTATTTTTATTCCTTGACTTTTTAGGCCGTTTG
TTATAGGCCTGGTTTTTTCTCTTCTCCGGAAAAAATGGGGTTCTCGAGAT
ATTCCATATGATATTTGCACTCTTTTTTCAGTGTAATTTGGGGGTGCAAC
AGGTTGTCCGCGGGGCTCCGTAGTGTAGAAGGAGTCTCCGTGGATGAATA
TTTTTGCCAAAAATGGCTCGTTTTCCCAAAGTTAACAAAGCTCTGCAGCT
ATGGACGCGTCTCGACGAGGCGGTCACGAATATCGTTGTTTCAGGTTCCA
AATGTAGTTCCAACAAAAGCTATCGCACGAAACGCGATTGCACAAGTTGT
TGTGCACGGTAGCAGCAAGTAAAATGCGGGTTGACTGGAGGGATTGCCGG
CAGGGTTGACAAAACTTCTTCGGAAAAAGCCACCAGCATCCTGTTGAAAA
TCAGTGTTTGTTCGCCGCCATCCTCTGCGCCTGTGAATCGGCCACACCAG
GGAAGCTACGGTTATATCTCTGCCGCCGGGGGGTACCGTGAGTCTAGGCG
TATCTAGAAGACCCCCGCCGGACGACGAGAGCGGGGAGCTGCTAGCCAGA
ACAAAGCTGGGGGACGGCGAGAAGACTTGGGGCTTTTGCACTTCGGACGG
GGGGGCCGCGGCGACGGTGAGCTATAGTAGCTTGTGATGGGGGGTCGACG
GACGGCCTGCCTTTGTCGCTTGTGTTTCCTTGGTGCCTGCTTCTGTACTT
GGCGGAGTGCCTGATACGGGCACAATCCAAGCGTGCAGGCGTGCAAGCGC
GTTCGCCCACGCTGCTTGTTTATCCGCTCGGGGCTGAGGCGCCACGGGAT
GATACATCTGATTCGTGATTCTCTGTCTGTACGCTGCTGCTGATGCGCGC
TGCTGTTGTGTGGGATTGCTCTTTTGGGCTCATGTGCCCCCGTTAACAAT
ATTGTGCTGCCAAGTTCGAGATCTAAATAGCGCCCTGCTGCCCCGGGTAG
ATATGGATCCGAACCCACGCCCTGTTCTTGATGTCCCTCCGCTGTTGCCG
ATTCTTTGCCGAACAGCTTAAGGAGGGAGACGTTATCGGGGTAGCGTTGG
ATTTCACCGACCTCCCGATGCTCTTCTTTACCCTCGGCGGGGCCCCCCTG
GGCCAGGGGGACGAGCTGGCGGTTATGCGAATTAGGGGTACCGTGTATCC
CGCGTTCGGCGTGGGGGGAGGTGCCGCCTTGAGCGTCACTTTTGCGGCAG
ACTCGCTGGCGCAGACGCCGCCGCGGAAGTGCGAGGCTCTCATCGTGGGA
CAAGATATGATGTGACTGCCGCGATTTGTTCTGCGGTTTAGTTTGTATGT
GCAAGTATGTTTTTTTGTGTGGATGTTCTTTGTTTTTTGCCAAACATTCT
TTCCGTGCAAGTTCGACCAATGGGACGACAACCGGAGAAGGCACTGTTGT
GCAGATCTTGCGGGTATCTGCTGCCGGGCGTGTTTAGATTCCGACCTGTT
GCGACTGGTTTTCCTTGACACGAAAAACTACTAAATATTTTTCGATTTTC
GCCTTAGCGGCCGGCACCAGTGAGAAGATCTCTTCGGCATCGTTGCGAAA
TGTAGGAAAAAATCACAATCAGAGAGCGTGCGGGGTTTGAGCGAACTTTC
TGCTGGGAAAACGAAAGATTGATGCATGTGTACGTACATGTGATATGTGC
GTGTGCAACGATAAGGCCGACCCATGAGAGAAGAGAGGGCGGATGTCTGG
TGAAGAAGAGGTTTTTCTTTTCGTGTCCGCGGCGGTGCAGAGACTGAAGC
CCTCGTCGATCCGCACAGGACTACAGGTCGTATCCTCCCCCCCGATTCCC
CGAAGACAGCTAAAACAGCAGAGCTGGAAGAGGATACAACAGCTTGCCGA
GCAAGAAGGGACTTTTCTGGGAAATCGAACAAGAGGTGGACATTCCGGCA
AGTTACATAGTTTTTTTCTTGCCGAAATTCGGACCCTTTGGGCGTGACTT
TTGCCAACAAACGGCCGTGGGGGAAACGACGGTCGCATCTTTTTGCCTGG
AGGCGCAAAGAAGCAGAGCGTTTTTCAGTAAAGCGCTCCGACTACAAGAC
GCAGAAAGGGAGGAGGGAGGGCGAGGTGTTTCATCTGGCGATTATTTGAT
GTTTCCCCCCCCATCGGCGTCGACCATCTACCGTCCGTAATATACCCTTG
AGAACGC
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig6891:723..7029-

>mRNA_L-elsbetiae_contig6891.15653.1 ID=mRNA_L-elsbetiae_contig6891.15653.1|Name=mRNA_L-elsbetiae_contig6891.15653.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1266bp|location=Sequence derived from alignment at L-elsbetiae_contig6891:723..7029- (Laminarionema elsbetiae ELsaHSoW15)
ATGGGCTGCTGCGAGAGCATAATGCGGGTGGTTCTCGGCGGAGGATCTGA
CAGTGGGAAGCAGGAAGTGGAAATGCAGTCGAAGACGGCGCCGACGCTGA
GCACAACACTCAAAAGCAAGGACGTCGTGGTGTTGCAGAGCCAAGGCCGC
CCAGCTACCCTCTCCGGCAGTGGGCTGGTTCTTGGCTGCGCGCCGGTTGA
GCAGATGGGCTGCTGCGAGAGCATAATGCGGGTGGTTCTCGGCGGAGGAT
CTGACAGTGGGAAGCAGGAAGTGGAAATGCAGTCGAAGACGGCGCCGACG
CTGAGCACAACACTCAAAAGCAAGGACGTCGTGGTGTTGCAGAGCCAAGG
CCGCCCAGCTACCCTCTCCGGCAGTGGGCTGGTTCTTGGCTGCGCGCCGG
TTGAGCAGGATTCAGCATATTGGATTCAGCATATTGGGAAGCTACGGTTA
TATCTCTGCCGCCGGGGGGTACCGTGAGTCTAGGCGTATCTAGAAGACCC
CCGCCGGACGACGAGAGCGGGGAGCTGCTAGCCAGAACAAAGCTGGGGGA
CGGCGAGAAGACTTGGGGCTTTTGCACTTCGGACGGGGGGGCCGCGGCGA
CGGGAAGCTACGGTTATATCTCTGCCGCCGGGGGGTACCGTGAGTCTAGG
CGTATCTAGAAGACCCCCGCCGGACGACGAGAGCGGGGAGCTGCTAGCCA
GAACAAAGCTGGGGGACGGCGAGAAGACTTGGGGCTTTTGCACTTCGGAC
GGGGGGGCCGCGGCGACGCTTAAGGAGGGAGACGTTATCGGGGTAGCGTT
GGATTTCACCGACCTCCCGATGCTCTTCTTTACCCTCGGCGGGGCCCCCC
TGGGCCAGGGGGACGAGCTGGCGGTTATGCGAATTAGGGGTACCGTGTAT
CCCGCGTTCGGCGTGGGGGGAGGTGCCGCCTTGAGCGTCACTTTTGCGGC
AGACTCGCTGGCGCAGACGCCGCCGCGGAAGTGCGAGGCTCTCATCGTGG
GACAAGATATGATGTGACTTAAGGAGGGAGACGTTATCGGGGTAGCGTTG
GATTTCACCGACCTCCCGATGCTCTTCTTTACCCTCGGCGGGGCCCCCCT
GGGCCAGGGGGACGAGCTGGCGGTTATGCGAATTAGGGGTACCGTGTATC
CCGCGTTCGGCGTGGGGGGAGGTGCCGCCTTGAGCGTCACTTTTGCGGCA
GACTCGCTGGCGCAGACGCCGCCGCGGAAGTGCGAGGCTCTCATCGTGGG
ACAAGATATGATGTGA
back to top