prot_L-elsbetiae_contig6890.15652.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig6890.15652.1
Unique Nameprot_L-elsbetiae_contig6890.15652.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length655
Homology
BLAST of mRNA_L-elsbetiae_contig6890.15652.1 vs. uniprot
Match: D8LKI8_ECTSI (Divergent RAB-like GTPase, N-terminal myristoylation predicted by ExPASy Myristoylator n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKI8_ECTSI)

HSP 1 Score: 387 bits (993), Expect = 4.920e-127
Identity = 220/330 (66.67%), Postives = 250/330 (75.76%), Query Frame = 0
Query:    1 MGQAVSFCTSCCPCPSRRKGRGAAVPGAA-DGKTKLLSPSPSGKSPKALGKK-SKYRRPPSHLRELSGDINQVVRLVLVGGCATGKTCLLRRFLGGYFDEAGQQDYTRQASRQITLGTISIAAFRPAFRPILLITLGVDFGCKTVDLGDRRVRLQMWDTGGSETYRSVVSHYLRGADGVIMCFDVSRKATLRSLRSTWAPFLDKHTPRTCRILLAGTKADCCSGAQGESAGGFQ-EDAKRFADAIEAQVFETSAKLGTNIDSAVLALMREVLHHREFAAQEKAEEGSRCSSYPKRKGRKRLSVALRDKLGSANEGETASLCASHDGTGQS 327
            MGQA S C+ CCPCP RRK   AAVPGA  + ++KLL  S + K+ K   +K SKYRRPPSHLRELSGDINQVVRLVLVGGC TGKTCLLRRFLGGYFD+ G QDYTRQA                       ITLGVDFGC+TVDL DRRVRLQMWDTGGSETYRSVVSHYLRGADGV+MCFDV+ K TLRSLRSTWAPFLDKHTPRTCR+LLAG KAD   G  G + G    EDAKRFA+A+EAQVFETSAKLGTN+D AV+ALM+EVLHHR+FAA++KA    + SS P R+GRKRLSV+L+  +    + + AS CA+  G G+S
Sbjct:    1 MGQAASCCSFCCPCPLRRKA--AAVPGATTEDQSKLLPSSSTKKAHKPRKEKCSKYRRPPSHLRELSGDINQVVRLVLVGGCDTGKTCLLRRFLGGYFDDIGHQDYTRQAQA---------------------ITLGVDFGCRTVDLADRRVRLQMWDTGGSETYRSVVSHYLRGADGVMMCFDVNSK-TLRSLRSTWAPFLDKHTPRTCRVLLAGNKADA-RGDFGVNGGEVSHEDAKRFAEAMEAQVFETSAKLGTNVDVAVMALMQEVLHHRQFAAEDKARSSKKGSS-PARRGRKRLSVSLKGVMERNGDRDIASSCAAQSGIGRS 304          
BLAST of mRNA_L-elsbetiae_contig6890.15652.1 vs. uniprot
Match: A0A835YYU6_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYU6_9STRA)

HSP 1 Score: 118 bits (296), Expect = 3.810e-27
Identity = 64/152 (42.11%), Postives = 80/152 (52.63%), Query Frame = 0
Query:   72 VRLVLVGGCATGKTCLLRRFLGGYF--DEAGQQDYTRQASRQITLGTISIAAFRPAFRPILLITLGVDFGCKTVDLGDRRVRLQMWDTGGSETYRSVVSHYLRGADGVIMCFDVSRKATLRSLRSTWAPFLDKHTPRTCRILLAGTKADCCS 221
            VRLV+VG C  GKT ++RR+L GYF  D A    Y+                           TLGVDFGCKTV L  +RVRLQ+WDT GS  Y SVVSHYL  ADGV + +D +   + + ++  W P +  + P   R LL G K D  S
Sbjct:    5 VRLVMVGDCGVGKTAIMRRYLNGYFCGDTAKGTPYSS--------------------------TLGVDFGCKTVHLEGKRVRLQVWDTSGSARYGSVVSHYLHAADGVALVYDTTCAESFQRVQDYWLPLVKSYAPEAVRFLLVGNKCDLTS 130          
BLAST of mRNA_L-elsbetiae_contig6890.15652.1 vs. uniprot
Match: H3GC27_PHYRM (Uncharacterized protein n=26 Tax=Oomycota TaxID=4762 RepID=H3GC27_PHYRM)

HSP 1 Score: 115 bits (288), Expect = 1.370e-25
Identity = 74/232 (31.90%), Postives = 120/232 (51.72%), Query Frame = 0
Query:   64 LSGDINQVVRLVLVGGCATGKTCLLRRFLGGYFDEAGQQDYTRQASRQITLGTISIAAFRPAFRPILLITLGVDFGCKTVDLGDRRVRLQMWDTGGSETYRSVVSHYLRGADGVIMCFDVSRKATLRSLRSTWAPFLDKHTPR-TCRILLAGTKADCCSGAQGESAGGFQEDAKRFADAIEAQVFETSAKLGTNIDSAVLALMREVLHHREFAAQEKAEEGSRCSSYPKRKG 294
            +S D + + +LVL+G    GK+CLL RF GG   +    +Y   AS+              AF    + T+GVDF  +TV + ++ V+LQ+WDT G E +R++ S Y RGADG+IM +DV+ + +   +   W   ++++    TC++L+ G K+D       ++     E AK FAD++     ETSAK   N++ A L +  E++  RE         G++ +   K  G
Sbjct:    1 MSRDYDHLFKLVLIGDSGVGKSCLLLRFAGGRLLDR-LTEYVADASQD------------DAFTESYITTIGVDFRFRTVKIDNKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTSQESFDHVND-WLNEVNRYASEGTCKLLV-GNKSDIS-----DNKAVSYETAKAFADSLSIPFLETSAKNAQNVEEAFLTMASELITIREMVGDSNRPAGTKLTENSKSGG 212          
BLAST of mRNA_L-elsbetiae_contig6890.15652.1 vs. uniprot
Match: L0B2B3_THEEQ (Ras related Rab1a small GTP-binding protein n=1 Tax=Theileria equi strain WA TaxID=1537102 RepID=L0B2B3_THEEQ)

HSP 1 Score: 108 bits (271), Expect = 1.600e-23
Identity = 66/225 (29.33%), Postives = 109/225 (48.44%), Query Frame = 0
Query:   65 SGDINQVVRLVLVGGCATGKTCLLRRFLGGYFDEAGQQDYTRQASRQITLGTISIAAFRPAFRPILLITLGVDFGCKTVDLGDRRVRLQMWDTGGSETYRSVVSHYLRGADGVIMCFDVSRKATLRSLRSTWAPFLDKHTPRTCRILLAGTKADCCSGAQGESAGGFQEDAKRFADAIEAQVFETSAKLGTNIDSAVLALMREVLHHREFAAQEKAEEGSRCSSY 289
            S D + + +LVLVG    GK+CLL RF    F ++                               + T+GVDF  +T+ + D+RV+LQ+WDT G E +R++ S Y RGADG+++ +D++ K++   + S W   +DK+       LL G K+D       + +     D KR ++ +   V E SAK G N++ A  ++   ++  +     E++E     SSY
Sbjct:    6 SKDYDYLFKLVLVGDSGVGKSCLLLRFADDSFTDS------------------------------YITTIGVDFRFRTIKVNDKRVKLQIWDTAGQERFRTITSTYYRGADGIVLAYDLTDKSSFDHI-SDWLAEVDKYAAEDTCKLLVGNKSDIQENRDVDPS-----DVKRLSELVNIPVMEVSAKTGENVEKAFFSITERLVELKMKGEPEESENRISLSSY 194          
BLAST of mRNA_L-elsbetiae_contig6890.15652.1 vs. uniprot
Match: A0A0M0JKI6_9EUKA (Ras-related protein ric1 n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JKI6_9EUKA)

HSP 1 Score: 108 bits (270), Expect = 2.230e-23
Identity = 64/202 (31.68%), Postives = 99/202 (49.01%), Query Frame = 0
Query:   67 DINQVVRLVLVGGCATGKTCLLRRFLGGYFDEAGQQDYTRQASRQITLGTISIAAFRPAFRPILLITLGVDFGCKTVDLGDRRVRLQMWDTGGSETYRSVVSHYLRGADGVIMCFDVSRKATLRSLRSTWAPFLDKHTPRTCRILLAGTKADCCSGAQGESAGGFQEDAKRFADAIEAQVFETSAKLGTNIDSAVLALMREV 268
            D + +  LVL+G    GK+CLL RF     D+     Y                          + T+GVDF  +T++L  + ++LQ+WDT G E +R++ S Y RGA G+I+ +DV+ + +  +++  W   +DK+       LL G KAD             QED K FA+ ++    ETSAK GT +D+A L +  E+
Sbjct:    4 DYDYLFILVLIGDSGVGKSCLLLRFA----DDKWTDSY--------------------------ISTIGVDFKIRTIELDQKTIKLQIWDTAGQERFRTISSTYYRGAHGIIVVYDVTNRTSFDNVQR-WLTEIDKYARENVNKLLVGNKADIADDVHNRQVS--QEDGKAFAEKVDVPFLETSAKTGTFVDTAFLMMAHEI 172          
BLAST of mRNA_L-elsbetiae_contig6890.15652.1 vs. uniprot
Match: A0A7S1R9U1_ALECA (Hypothetical protein n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1R9U1_ALECA)

HSP 1 Score: 109 bits (272), Expect = 3.220e-23
Identity = 69/203 (33.99%), Postives = 101/203 (49.75%), Query Frame = 0
Query:   66 GDINQVVRLVLVGGCATGKTCLLRRFLGGYFDEAGQQDYTRQASRQITLGTISIAAFRPAFRPILLITLGVDFGCKTVDLGDRRVRLQMWDTGGSETYRSVVSHYLRGADGVIMCFDVSRKATLRSLRSTWAPFLDKHTPRTCRILLAGTKADCCSGAQGESAGGFQEDAKRFADAIEAQVFETSAKLGTNIDSAVLALMREV 268
            GD + + +LV++G    GK+ LLRRF+ G +D      YT                           T+GVDFG ++  L  ++V+LQ+WDT GSE +R++ S Y RGA GVI+ FDVS + +   +R  W     K  P T R +L G K D      GE     +++A   AD +   + E SAK   N++ A L+L R +
Sbjct:    9 GDADFIFKLVVIGDLGVGKSALLRRFVDGLYDTT----YTA--------------------------TIGVDFGTRSCTLDGKKVKLQIWDTAGSERFRAITSSYYRGAHGVIVVFDVSDRKSFERVRY-WLAEAGKSAPVTARRMLVGNKCDLT----GEGRSISRDEAFDLADGLGVPLVEASAKSSENVEEAFLSLARAI 176          
BLAST of mRNA_L-elsbetiae_contig6890.15652.1 vs. uniprot
Match: A0A7S2DDC9_9EUKA (Hypothetical protein n=2 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2DDC9_9EUKA)

HSP 1 Score: 108 bits (269), Expect = 4.670e-23
Identity = 67/202 (33.17%), Postives = 101/202 (50.00%), Query Frame = 0
Query:   67 DINQVVRLVLVGGCATGKTCLLRRFLGGYFDEAGQQDYTRQASRQITLGTISIAAFRPAFRPILLITLGVDFGCKTVDLGDRRVRLQMWDTGGSETYRSVVSHYLRGADGVIMCFDVSRKATLRSLRSTWAPFLDKHTPRTCRILLAGTKADCCSGAQGESAGGFQEDAKRFADAIEAQVFETSAKLGTNIDSAVLALMREV 268
            D + +  LVL+G    GK+CLL RF     D+     Y                          + T+GVDF  +T++L  + ++LQ+WDT G E +R++ S Y RGA G+I+ +DV+ K +  +++  W   +DK+       LL G KAD   GA   S     ED K+FA+  +    ETSAK GT +D+A L +  E+
Sbjct:   22 DYDYLFILVLIGDSGVGKSCLLLRFA----DDKWTDSY--------------------------ISTIGVDFKIRTIELDQKTIKLQIWDTAGQERFRTISSTYYRGAHGIIVVYDVTNKLSFDNVQR-WLSEIDKYARENVNKLLVGNKADAAEGAD-SSRQVPMEDGKKFAEDRDIPFLETSAKTGTFVDTAFLMMAHEI 191          
BLAST of mRNA_L-elsbetiae_contig6890.15652.1 vs. uniprot
Match: J4CDX6_THEOR (Rab GTPase n=2 Tax=Theileria orientalis TaxID=68886 RepID=J4CDX6_THEOR)

HSP 1 Score: 107 bits (268), Expect = 5.210e-23
Identity = 67/208 (32.21%), Postives = 106/208 (50.96%), Query Frame = 0
Query:   64 LSGDINQVVRLVLVGGCATGKTCLLRRFLGGYFDEAGQQDYTRQASRQITLGTISIAAFRPAFRPILLITLGVDFGCKTVDLGDRRVRLQMWDTGGSETYRSVVSHYLRGADGVIMCFDVSRKATLRSLRSTWAPFLDKHTPR-TCRILLAGTKADCCSGAQGESAGGFQEDAKRFADAIEAQVFETSAKLGTNIDSAVLALMREVLH 270
            +S D + + +LVL+G    GK+CLL RF    F ++                               + T+GVDF  +TV + ++R++LQ+WDT G E +R++ S Y RGADG+IM +DV+ KA+   +   W   ++K+    TC++LL G K D        S      D +R ++ IE    E SAK G NID A L++  ++++
Sbjct:    5 ISKDYDYLFKLVLIGDSGVGKSCLLLRFADDSFTDS------------------------------YITTIGVDFRFRTVIVNNKRIKLQIWDTAGQERFRTITSTYYRGADGIIMVYDVTDKASFEHIND-WLNEVNKYASEDTCKLLL-GNKCDIEDNRDVAST-----DVERLSEVIEVPAMEVSAKTGHNIDKAFLSITEKLVN 175          
BLAST of mRNA_L-elsbetiae_contig6890.15652.1 vs. uniprot
Match: UPI00100E334F (ras-related protein Rab-8B-like n=1 Tax=Aphis gossypii TaxID=80765 RepID=UPI00100E334F)

HSP 1 Score: 108 bits (270), Expect = 1.060e-22
Identity = 70/218 (32.11%), Postives = 105/218 (48.17%), Query Frame = 0
Query:   64 LSGDINQVVRLVLVGGCATGKTCLLRRFLGGYFDEAGQQDYTRQASRQITLGTISIAAFRPAFRPILLITLGVDFGCKTVDLGDRRVRLQMWDTGGSETYRSVVSHYLRGADGVIMCFDVSRKATLRSLRSTWAPFLDKHTPRTCRILLAGTKADCCSGAQGESAGGFQED-AKRFADAIEAQVFETSAKLGTNIDSAVLALMREVLHHREFAAQEKA 280
            + GD  +  ++V  G  A GKTC + RF  G F                 LG+                TLGVDF  KT+ + DR V LQ+WDT G E +RS+   Y R ADGV++ +DV+ + +  ++R  W   + + + +   I + G K D    A+ +       D  +  A   +A  FETS+KLGTNI++A++ L RE+L   +   Q  A
Sbjct:   65 MGGDPERTYKIVFAGDAAVGKTCFIHRFCKGVFSSK--------------LGS----------------TLGVDFQMKTIRVDDRNVALQLWDTAGQERFRSITKAYFRRADGVVLLYDVTNERSFINIRQ-WVLSITEVSDKQLPICICGNKLDLRRDAELQGLTCVSTDHGELLAKDYDAAFFETSSKLGTNINNALITLCREMLIREDVEVQTSA 251          
BLAST of mRNA_L-elsbetiae_contig6890.15652.1 vs. uniprot
Match: F0W1W0_9STRA (Rab1 family GTPase putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W1W0_9STRA)

HSP 1 Score: 106 bits (265), Expect = 1.080e-22
Identity = 71/230 (30.87%), Postives = 113/230 (49.13%), Query Frame = 0
Query:   64 LSGDINQVVRLVLVGGCATGKTCLLRRFLGGYFDEAGQQDYTRQASRQITLGTISIAAFRPAFRPILLITLGVDFGCKTVDLGDRRVRLQMWDTGGSETYRSVVSHYLRGADGVIMCFDVSRKATLRSLRSTWAPFLDKHTPR-TCRILLAGTKADCCSGAQGESAGGFQEDAKRFADAIEAQVFETSAKLGTNIDSAVLALMREVLHHREFAAQEKAEEGSRCSSYPKR 292
            +S D + + +LVL+G    GK+CLL RF     D+A  + Y                          + T+GVDF  +TV +  + ++LQ+WDT G E +R++ S Y RGADG+IM +DV+ + +   +   W   ++++    TC++L+ G K+D       ES     E AK FAD++     ETSAK   N++ A L +  E++  RE         G+  S   +R
Sbjct:    1 MSKDYDHLFKLVLIGDSGVGKSCLLLRFA----DDAFTESY--------------------------ITTIGVDFRFRTVRIDKKTIKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTNQESFDHVND-WLNEVNRYASEGTCKLLV-GNKSDIT-----ESRAVTYETAKAFADSLSIPFLETSAKNAQNVEEAFLTMASELITIREMLGDANRPRGTSLSEEARR 193          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6890.15652.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LKI8_ECTSI4.920e-12766.67Divergent RAB-like GTPase, N-terminal myristoylati... [more]
A0A835YYU6_9STRA3.810e-2742.11P-loop containing nucleoside triphosphate hydrolas... [more]
H3GC27_PHYRM1.370e-2531.90Uncharacterized protein n=26 Tax=Oomycota TaxID=47... [more]
L0B2B3_THEEQ1.600e-2329.33Ras related Rab1a small GTP-binding protein n=1 Ta... [more]
A0A0M0JKI6_9EUKA2.230e-2331.68Ras-related protein ric1 n=1 Tax=Chrysochromulina ... [more]
A0A7S1R9U1_ALECA3.220e-2333.99Hypothetical protein n=1 Tax=Alexandrium catenella... [more]
A0A7S2DDC9_9EUKA4.670e-2333.17Hypothetical protein n=2 Tax=Haptolina brevifila T... [more]
J4CDX6_THEOR5.210e-2332.21Rab GTPase n=2 Tax=Theileria orientalis TaxID=6888... [more]
UPI00100E334F1.060e-2232.11ras-related protein Rab-8B-like n=1 Tax=Aphis goss... [more]
F0W1W0_9STRA1.080e-2230.87Rab1 family GTPase putative n=1 Tax=Albugo laibach... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 206..219
score: 33.48
coord: 72..93
score: 38.64
coord: 143..165
score: 37.05
coord: 246..268
score: 33.35
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 72..271
e-value: 1.3E-25
score: 101.1
NoneNo IPR availableSMARTSM00174rho_sub_3coord: 74..267
e-value: 1.3E-9
score: 4.3
NoneNo IPR availableSMARTSM00173ras_sub_4coord: 69..271
e-value: 1.4E-4
score: -41.4
NoneNo IPR availableGENE3D3.40.50.300coord: 65..302
e-value: 1.3E-43
score: 150.5
NoneNo IPR availablePANTHERPTHR24073:SF519RAS-RELATED PROTEIN RAB-44coord: 64..282
NoneNo IPR availablePANTHERPTHR24073FAMILY NOT NAMEDcoord: 64..282
NoneNo IPR availablePROSITEPS51419RABcoord: 67..318
score: 19.694
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 72..261
e-value: 1.2E-15
score: 55.6
IPR001806Small GTPasePFAMPF00071Rascoord: 126..269
e-value: 3.0E-25
score: 88.7
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 69..274

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6890contigL-elsbetiae_contig6890:2256..9881 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6890.15652.1mRNA_L-elsbetiae_contig6890.15652.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig6890 2256..9881 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig6890.15652.1 ID=prot_L-elsbetiae_contig6890.15652.1|Name=mRNA_L-elsbetiae_contig6890.15652.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=655bp
MGQAVSFCTSCCPCPSRRKGRGAAVPGAADGKTKLLSPSPSGKSPKALGK
KSKYRRPPSHLRELSGDINQVVRLVLVGGCATGKTCLLRRFLGGYFDEAG
QQDYTRQASRQITLGTISIAAFRPAFRPILLITLGVDFGCKTVDLGDRRV
RLQMWDTGGSETYRSVVSHYLRGADGVIMCFDVSRKATLRSLRSTWAPFL
DKHTPRTCRILLAGTKADCCSGAQGESAGGFQEDAKRFADAIEAQVFETS
AKLGTNIDSAVLALMREVLHHREFAAQEKAEEGSRCSSYPKRKGRKRLSV
ALRDKLGSANEGETASLCASHDGTGQSSTQAYSSDGNATEATNSAESSSA
SHRHGDSSDQEGNKSKDQGDHNRAWVPFPCNIGADADDVSALGSSVDGGR
SVTGGMNMPGIMGGRLSLATRRNEGLESARRVSGDSGFQEGGRYHLINQL
AVASPSREARIDGAGIDAGGKGGGAEVSSDRSPLREREEKSPHRLDRGDG
NTSSRETTGRNQSTLPKPGSTNISMASARPRRPIAASQSDQPPRVAVGPT
VLVVDEWQRLQGGGMAKVDGVDTPMPAYCGTSTIGTREALPSRSPTEEVS
SALPSETKATEMNLHVHDGGLGSSTPTSSSSSVSTVIIGDDVGYRPASPV
TERG*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005225Small_GTP-bd_dom
IPR001806Small_GTPase
IPR027417P-loop_NTPase