prot_L-elsbetiae_contig6885.15645.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig6885.15645.1
Unique Nameprot_L-elsbetiae_contig6885.15645.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length514
Homology
BLAST of mRNA_L-elsbetiae_contig6885.15645.1 vs. uniprot
Match: A0A6H5L2E6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2E6_9PHAE)

HSP 1 Score: 213 bits (541), Expect = 1.080e-58
Identity = 135/347 (38.90%), Postives = 159/347 (45.82%), Query Frame = 0
Query:    5 QYTLGLFSSTAAPSDETQAGSGEVVRGRLMKLQRTR-----RALEAGGGASTSGVIPATNSALAEDSWDHWGELGMHKGELSCKCRLVLPLNPDVVQEPVVVTETVIRTVLGAGGAMTQESVETETVVHRTSFRFSHSDLVAVSGTLVEELSTLKAWQHLPLWKVANADVNPLPIHEDLFHVDADTVGVAPVGGTGNEKVVCKLCTAQLPRSKMRMHVGGHILKDKALQVSTVCGFCGGSGCRTTIKDPIGRAAPVMHSSCIYAPRNDARHETVAVNLKSARAGSRSSPCTNIVVKCIFCSQETYIWKYGMADHVTRCHHQDTLVEDGTESAKKFKHNYTVSGSEKS 346
            QY LGLFS T AP DE       V +GRLMKLQR++      A+  G G  TS      + A A+DSW HWG+LG+HKGELSCKCRLVL L+PD                                                                                  +D +                                      GGHILKDK   VST CGFCGG G  TTI DP G+A P++HS+C  APR+DAR E VA+NL SARAGS +S CTN+V KC FCSQ  YIWKY M+DH+TRCH  D LV +GT  A  FK   T+S SEK+
Sbjct:  304 QYALGLFSCTKAPMDEQAQDGSPVFKGRLMKLQRSKVAPAVGAVRLGEGDGTSSSDFGEDGAPAKDSWQHWGDLGLHKGELSCKCRLVLALDPD----------------------------------------------------------------------------------DDAYR-------------------------------------GGHILKDK---VSTACGFCGGVGRPTTIHDPPGKARPLVHSTCPSAPRSDARQEAVALNLSSARAGSDTSLCTNMVFKCFFCSQYNYIWKYSMSDHITRCHQADVLVAEGT-GADNFKETCTISESEKA 527          
BLAST of mRNA_L-elsbetiae_contig6885.15645.1 vs. uniprot
Match: A0A6H5K6M3_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6M3_9PHAE)

HSP 1 Score: 187 bits (474), Expect = 3.260e-47
Identity = 100/183 (54.64%), Postives = 120/183 (65.57%), Query Frame = 0
Query:  186 VGVAPVGGTGNEKVVCKLCTAQLPRSKMRMHVGGHILKDKALQVSTVCGFCGGSGCRTTIKDPIGRAAPVMHSSCIYAPRNDARHETVAVNLKSARAGSRSSPCTNIVVKCIFCSQETYIWKYGMADHVTRCHHQDTLVEDGTESAKKFKHNYTVSGSEKSAVLNKFKGGTPRKRREDDTLPP 368
            V  A VG T +  +V   C           HVGG    +K   VSTVCGFCGG GCR+TI DP G A P++HS+C  APR+DAR E VA+NL SARA S +SPCTN+V+KC  CSQ+ YIW YGM DHVTRCH  + LV  GT  A KFK   T+S SEK+ VL+K K G PR+R + +TLPP
Sbjct: 1057 VEAAGVGNTDSRGIVVGDC-----------HVGGDP-GNKTSPVSTVCGFCGGVGCRSTIHDPPGEARPLVHSTCPSAPRSDARQEAVALNLSSARADSDTSPCTNMVLKCFLCSQDNYIWNYGMFDHVTRCHQANVLVAVGT-GADKFKEACTISESEKAKVLHKVKAGRPRRRDQGNTLPP 1226          
BLAST of mRNA_L-elsbetiae_contig6885.15645.1 vs. uniprot
Match: D7FNW9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNW9_ECTSI)

HSP 1 Score: 109 bits (272), Expect = 7.350e-24
Identity = 54/102 (52.94%), Postives = 71/102 (69.61%), Query Frame = 0
Query:  292 IVVKCIFCSQETYIWKYGMADHVTRCHHQDTLVEDGTESAKKFKHNYTVSGSEKSAVLNKFKGGTPRKRRE-DDTLPPGIRRVVSGNGVPRRGVPGARPLEE 392
            +V+KC+FCSQ+TYIWKYGM++HVTRCH +D LV  GT +  +FK  YT+S SEK+ VL KFK G PR+R + ++ LP G      GNG   R + G R LE+
Sbjct:    1 MVLKCLFCSQDTYIWKYGMSEHVTRCHREDILVAAGT-TVDRFKEAYTISESEKAKVLQKFKAGRPRRRGQGNEALPTGALGSTEGNGTFGRNMSGTRSLED 101          
BLAST of mRNA_L-elsbetiae_contig6885.15645.1 vs. uniprot
Match: A0A6H5K5R3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5R3_9PHAE)

HSP 1 Score: 97.8 bits (242), Expect = 6.800e-20
Identity = 50/102 (49.02%), Postives = 65/102 (63.73%), Query Frame = 0
Query:  292 IVVKCIFCSQETYIWKYGMADHVTRCHHQDTLVEDGTESAKKFKHNYTVSGSEKSAVLNKFKGGTPRKRRE-DDTLPPGIRRVVSGNGVPRRGVPGARPLEE 392
            +V+KC  CSQ  YIWKYGM++HVTR H +D  V  GT    KFK  Y++S SEK+  L+KFK G PR+R + ++ LPPG      GNG   R + G R LE+
Sbjct:    1 MVLKCFVCSQNNYIWKYGMSEHVTRRHQEDMRVAAGT-GVDKFKEAYSISESEKAKALHKFKAGKPRQRGQGNEVLPPGALGRTEGNGASGRNMAGTRSLED 101          
BLAST of mRNA_L-elsbetiae_contig6885.15645.1 vs. uniprot
Match: A0A4S4MVC7_9APHY (Uncharacterized protein n=1 Tax=Antrodiella citrinella TaxID=2447956 RepID=A0A4S4MVC7_9APHY)

HSP 1 Score: 63.9 bits (154), Expect = 5.460e-7
Identity = 45/144 (31.25%), Postives = 65/144 (45.14%), Query Frame = 0
Query:  196 NEKVVCKLCTAQLPRSKMRMHVGGHIL------KDKALQVST-VCGFCGGSGCRTTIKDPIGRAAPVMHSSCIYAPRNDARHETVAVNLKSARAGSRSSPCTNIVVKCIFCSQETY-----IWKYGMADHVTRCHHQDTLVEDG 327
            ++++ C+LC    P S+MR HVG HIL      +D  + +    CGFCG  GC   + D        + S+C Y       H T  +    A   S ++PCTN+ + C+ C +        IWKY    H+T   H   L E G
Sbjct:  769 DDEIQCQLCEVNTPLSRMRNHVGIHILHALRGIEDDGIVIGVDPCGFCGLEGCVVQMIDSDDGNTHRILSNCEY-------HYT-QMKYGPASRFSNATPCTNVPIHCLSCERTASGLPRTIWKYNALYHIT-LDHSHWLDESG 903          
BLAST of mRNA_L-elsbetiae_contig6885.15645.1 vs. uniprot
Match: B0DV83_LACBS (Predicted protein n=1 Tax=Laccaria bicolor (strain S238N-H82 / ATCC MYA-4686) TaxID=486041 RepID=B0DV83_LACBS)

HSP 1 Score: 54.7 bits (130), Expect = 2.190e-5
Identity = 41/117 (35.04%), Postives = 60/117 (51.28%), Query Frame = 0
Query:  194 TGNEKVVCKLCTAQLPRSKMRMHVGGHILKD---------KALQVSTVCGFCG-GSGCRTTIKDPIGRAAPVMHSSCIYAPRNDARHETVAVNLKSARAGSRSSPCTNIVVKCIFCS 300
            +G   V C+LC  +   SKMR+HVG HIL           K++  S  CGFCG  SGC+T +       A V+ S+C +       +E +    K+A   +++SPCTNI + C  C+
Sbjct:   28 SGATDVNCELCGEKTTISKMRVHVGKHILYSMRRRPDVELKSMGASP-CGFCGLDSGCQTQLTFKKNGVA-VIKSTCPF------HYEKM--QYKAALEPTKASPCTNIPIHCRLCA 134          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6885.15645.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A6H5L2E6_9PHAE1.080e-5838.90Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K6M3_9PHAE3.260e-4754.64Reverse transcriptase Ty1/copia-type domain-contai... [more]
D7FNW9_ECTSI7.350e-2452.94Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K5R3_9PHAE6.800e-2049.02Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A4S4MVC7_9APHY5.460e-731.25Uncharacterized protein n=1 Tax=Antrodiella citrin... [more]
B0DV83_LACBS2.190e-535.04Predicted protein n=1 Tax=Laccaria bicolor (strain... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 387..457

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6885contigL-elsbetiae_contig6885:777..2661 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6885.15645.1mRNA_L-elsbetiae_contig6885.15645.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig6885 777..2661 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig6885.15645.1 ID=prot_L-elsbetiae_contig6885.15645.1|Name=mRNA_L-elsbetiae_contig6885.15645.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=514bp
MGRGQYTLGLFSSTAAPSDETQAGSGEVVRGRLMKLQRTRRALEAGGGAS
TSGVIPATNSALAEDSWDHWGELGMHKGELSCKCRLVLPLNPDVVQEPVV
VTETVIRTVLGAGGAMTQESVETETVVHRTSFRFSHSDLVAVSGTLVEEL
STLKAWQHLPLWKVANADVNPLPIHEDLFHVDADTVGVAPVGGTGNEKVV
CKLCTAQLPRSKMRMHVGGHILKDKALQVSTVCGFCGGSGCRTTIKDPIG
RAAPVMHSSCIYAPRNDARHETVAVNLKSARAGSRSSPCTNIVVKCIFCS
QETYIWKYGMADHVTRCHHQDTLVEDGTESAKKFKHNYTVSGSEKSAVLN
KFKGGTPRKRREDDTLPPGIRRVVSGNGVPRRGVPGARPLEEEKEEEEEQ
EQEEEEEEEEEDQEQEEEEDEEQEQEKEQEEEEDEEMEEGEEEEEEDQDH
REDENEDDQPGGRGEGRNKRRRAGSSNENSKPPRENVEEPMRQKSRGGRE
IRSNVRRRDLGSL*
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