prot_L-elsbetiae_contig6884.15644.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig6884.15644.1
Unique Nameprot_L-elsbetiae_contig6884.15644.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length235
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig6884.15644.1 vs. uniprot
Match: A0A6H5L6H0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6H0_9PHAE)

HSP 1 Score: 72.4 bits (176), Expect = 2.340e-12
Identity = 45/138 (32.61%), Postives = 66/138 (47.83%), Query Frame = 0 
Query:   97 IAAKAKVVSAGVRRHASRQVQEIKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVQAEIQGLWDCMRKHFPVVRSHVAAEVETKIVETEETIRAIQDEPNRKLSFIKSVGGLA 234
            I+AKAK V+AGVRR+AS++V E ++                                                     KVQA ++ L DCMR+HF VVRSH+  +V +K+ +TEE + AI  +P++ LS I+  GGL+
Sbjct:   17 ISAKAKAVAAGVRRNASKRVDEARAGQNKLATELRSTLGSLHAALEEEDHLASVLMEEQENAMKEAVNSLSEKYEEAAKVQARVKLLGDCMRQHFQVVRSHIVDQVGSKLTDTEEIVHAIHIQPDKTLSLIRRAGGLS 154
[Close]
BLAST of mRNA_L-elsbetiae_contig6884.15644.1 vs. uniprot
Match: D8LNP6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNP6_ECTSI)

HSP 1 Score: 51.6 bits (122), Expect = 5.550e-5
Identity = 34/114 (29.82%), Postives = 50/114 (43.86%), Query Frame = 0 
Query:   99 AKAKVVSAGVRRHASRQVQEIKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVQAEIQGLWDCMRKHFPVVRSHVAAEVETKIVETEET 212
            +KAK V+AGVRR+AS++V E+++                                                     KVQA+++ L DCMR+HF VVRSH+  +V +K+ ET  T
Sbjct:   10 SKAKAVAAGVRRNASKRVDEVRTGQNKLATELRSTLGSLHAALEEEDHLASALMEEQERTMKEAVDSLSEKYEEAAKVQAQVKLLGDCMRQHFQVVRSHIVDQVGSKLTETVST 123
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6884.15644.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L6H0_9PHAE2.340e-1232.61Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LNP6_ECTSI5.550e-529.82Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 199..219
NoneNo IPR availableCOILSCoilCoilcoord: 134..161
NoneNo IPR availableCOILSCoilCoilcoord: 74..101

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6884contigL-elsbetiae_contig6884:5689..9199 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6884.15644.1mRNA_L-elsbetiae_contig6884.15644.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig6884 5582..9907 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig6884.15644.1 ID=prot_L-elsbetiae_contig6884.15644.1|Name=mRNA_L-elsbetiae_contig6884.15644.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=235bp
MEIPCMPQLPVLDKRPADGGGGGGGGISESKTPFQLSQLDLGSIGVTKRP
GGRKRAAASAALDDDEDPLEEAQLVQLLQQMQKLKQSKENKRRKAAIAAK
AKVVSAGVRRHASRQVQEIKSNQAKRAAEVRSAMESLRKGLEEEAKLAST
LREENTKAAKEAIDTLKERYDEVAKVQAEIQGLWDCMRKHFPVVRSHVAA
EVETKIVETEETIRAIQDEPNRKLSFIKSVGGLA*
back to top