prot_L-elsbetiae_contig687.15628.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig687.15628.1
Unique Nameprot_L-elsbetiae_contig687.15628.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length603
Homology
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BLAST of mRNA_L-elsbetiae_contig687.15628.1 vs. uniprot
Match: D7G2N7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2N7_ECTSI)

HSP 1 Score: 187 bits (476), Expect = 3.600e-52
Identity = 112/144 (77.78%), Postives = 124/144 (86.11%), Query Frame = 0 
Query:  284 TAQEQLVFTQERFEATKHKARQLSGQLEMEAGDNEILRRRLQAMEEEKGMRTRSLQERKAKAQQRKRGDTRDMMAESKAKDDRVKSLESTLIQERARLEGELQSARSDYEEAAKENRRKTTRLQKRILELEYR-ATQSKGSDGN 426
            T QEQL FTQERFEA KHK+RQL+GQL  EA  NE LR R+ A+EEE  +RTRSL ERKAKAQQRKRGD RDMMAESKAKDDR+K LESTL+QERARLEGEL+SARSDYEEAAKE+RRK  RLQ+R LELEYR ATQS+GS+ N
Sbjct:   17 TVQEQLSFTQERFEAAKHKSRQLAGQLGNEAAANEDLRARMHALEEENDIRTRSLLERKAKAQQRKRGDARDMMAESKAKDDRIKRLESTLMQERARLEGELRSARSDYEEAAKESRRKAARLQRRCLELEYRVATQSQGSETN 160
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig687.15628.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G2N7_ECTSI3.600e-5277.78Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 371..405
NoneNo IPR availableCOILSCoilCoilcoord: 310..330
NoneNo IPR availableCOILSCoilCoilcoord: 163..190
NoneNo IPR availableCOILSCoilCoilcoord: 112..132

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig687contigL-elsbetiae_contig687:13763..21636 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig687.15628.1mRNA_L-elsbetiae_contig687.15628.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig687 13763..21636 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig687.15628.1 ID=prot_L-elsbetiae_contig687.15628.1|Name=mRNA_L-elsbetiae_contig687.15628.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=603bp
GTTVLGTPATTSYGLFHQPASGAEISRNVSKVATAGREPASTFSVTKPHW
RTAGGETLASAAPAFEIAADYDGSDEAVNQHSSNLLERHTSAAKDGVIDM
LTAKASKLGVSLERALLARKEAEDSAERLQARKGTYTFKRKGVEHQFQQK
ENEFKVSGSEQENGHLKWEVDSLRVELQDAEERAKGWIQEEAERRRSAEE
AMSREHAVAAEYLASVYHEGSGPEIRREGGATVAEVLVRELQGLGEALRE
REGELGACSERLEKVVSDAKAERARQGWMRVWATAQEQLVFTQERFEATK
HKARQLSGQLEMEAGDNEILRRRLQAMEEEKGMRTRSLQERKAKAQQRKR
GDTRDMMAESKAKDDRVKSLESTLIQERARLEGELQSARSDYEEAAKENR
RKTTRLQKRILELEYRATQSKGSDGNSGSARKYLSVLSAIRANYYYHSRC
CSFKKQNTRACPAGLISAASMLPWRRGAASCETLASVSTVTMKSSRSRLG
SGSAAAAAAAAAGGATPEATTTTRARGRGGRGAGGGGGGGGGGGAQESET
VAAGRNSPFSSTTTASGARRASADRLPDPSRHNEGAPAWMRADLAADRVR
VD*
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