prot_L-elsbetiae_contig6854.15611.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig6854.15611.1 vs. uniprot
Match: A0A6H5JST3_9PHAE (RNA_pol_L_2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JST3_9PHAE) HSP 1 Score: 234 bits (597), Expect = 5.790e-78 Identity = 117/118 (99.15%), Postives = 117/118 (99.15%), Query Frame = 0 Query: 1 RSESWRLNDDEKKLAYTPDTKIPHAGTFEIIKEDHTLGNLLRMQLLADRQVRFAGYMQPHPLENKIHIKVQTNGDNTPVDALSTATEDLSQEMEGLREVFQEQVAAAKHAAEQEQFGS 118 RSESWRLNDDEKKLAYTPDTKIPHAGTFEIIKEDHTLGNLLRMQLLADRQVRFAGYMQPHPLENKIHIKVQTNGDNTPVDALS ATEDLSQEMEGLREVFQEQVAAAKHAAEQEQFGS Sbjct: 6 RSESWRLNDDEKKLAYTPDTKIPHAGTFEIIKEDHTLGNLLRMQLLADRQVRFAGYMQPHPLENKIHIKVQTNGDNTPVDALSAATEDLSQEMEGLREVFQEQVAAAKHAAEQEQFGS 123
BLAST of mRNA_L-elsbetiae_contig6854.15611.1 vs. uniprot
Match: D7G4D0_ECTSI (RNA polymerase II core subunit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4D0_ECTSI) HSP 1 Score: 209 bits (531), Expect = 3.140e-67 Identity = 104/107 (97.20%), Postives = 106/107 (99.07%), Query Frame = 0 Query: 12 KKLAYTPDTKIPHAGTFEIIKEDHTLGNLLRMQLLADRQVRFAGYMQPHPLENKIHIKVQTNGDNTPVDALSTATEDLSQEMEGLREVFQEQVAAAKHAAEQEQFGS 118 ++LAYTPDTKIPHAGTFEIIKEDHTLGNLLRMQLLADRQVRFAGYMQPHPLENKIHIKVQTNGDNTPVDALS ATEDLSQEMEGLREVFQEQVAAAKHAAEQEQFGS Sbjct: 64 RRLAYTPDTKIPHAGTFEIIKEDHTLGNLLRMQLLADRQVRFAGYMQPHPLENKIHIKVQTNGDNTPVDALSAATEDLSQEMEGLREVFQEQVAAAKHAAEQEQFGS 170
BLAST of mRNA_L-elsbetiae_contig6854.15611.1 vs. uniprot
Match: A0A836CIX8_9STRA (Putative DNA-directed RNA polymerase II 13.6 kDa polypeptide n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIX8_9STRA) HSP 1 Score: 154 bits (388), Expect = 4.040e-46 Identity = 76/116 (65.52%), Postives = 91/116 (78.45%), Query Frame = 0 Query: 1 RSESWRLNDDEKKLAYTPDTKIPHAGTFEIIKEDHTLGNLLRMQLLADRQVRFAGYMQPHPLENKIHIKVQTNGDNTPVDALSTATEDLSQEMEGLREVFQEQVAAAKHAAEQEQF 116 RSESWRLN+ E+K+ Y PDTKIP+AG F I KEDHTLGNL+RMQLL DRQVRFAGY+ PHPLEN + +KVQTNG+ TP+DALSTA EDL+ E++ L + F E V A K E Q+ Sbjct: 6 RSESWRLNEGEEKVDYEPDTKIPNAGNFIIKKEDHTLGNLIRMQLLQDRQVRFAGYLMPHPLENIMRVKVQTNGEVTPMDALSTAIEDLTSEVDNLTQRFAEGVLACKRLQESRQY 121
BLAST of mRNA_L-elsbetiae_contig6854.15611.1 vs. uniprot
Match: K0SS38_THAOC (RNA_pol_L_2 domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SS38_THAOC) HSP 1 Score: 120 bits (302), Expect = 5.020e-33 Identity = 59/97 (60.82%), Postives = 75/97 (77.32%), Query Frame = 0 Query: 1 RSESWRLNDDEKKLAYTPDTKIPHAGTFEIIKEDHTLGNLLRMQLLADRQVRFAGYMQPHPLENKIHIKVQTNGDNT-PVDALSTATEDLSQEMEGL 96 RS+++ L DDE+K+ Y PDTK+ +AGTF + KEDHT+GNLLRMQLL D QV+FAGYM PHPL N+IH+KVQT+ P ++LS A EDLS E + L Sbjct: 7 RSDAFLLGDDEEKIEYQPDTKVANAGTFTLNKEDHTVGNLLRMQLLRDPQVKFAGYMHPHPLVNRIHLKVQTSTSQVAPTESLSAAIEDLSNETDHL 103
BLAST of mRNA_L-elsbetiae_contig6854.15611.1 vs. uniprot
Match: A0A6U1NZH5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1NZH5_9STRA) HSP 1 Score: 120 bits (301), Expect = 7.770e-33 Identity = 60/105 (57.14%), Postives = 77/105 (73.33%), Query Frame = 0 Query: 1 RSESWRLNDDEKKLAYTPDTKIPHAGTFEIIKEDHTLGNLLRMQLLADRQVRFAGYMQPHPLENKIHIKVQTNGDNT-PVDALSTATEDLSQEMEGLREVFQEQV 104 RS+S+RL + EKKL Y PDTKIP+AGTF + +EDHTLGNLLRMQLL D VRFAGY PHPL + + +K+QT P+ A+ST+ EDLS E + L + F+E + Sbjct: 6 RSQSYRLAEGEKKLTYEPDTKIPNAGTFTLNREDHTLGNLLRMQLLQDSSVRFAGYQHPHPLVHHLLVKIQTTDPPANPIQAMSTSIEDLSSEFDFLEQRFKEDI 110
BLAST of mRNA_L-elsbetiae_contig6854.15611.1 vs. uniprot
Match: F0Y9X2_AURAN (RNA_pol_L_2 domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y9X2_AURAN) HSP 1 Score: 114 bits (284), Expect = 2.350e-30 Identity = 58/109 (53.21%), Postives = 74/109 (67.89%), Query Frame = 0 Query: 1 RSESWRLNDDEKKLAYTPDTKIPHAGTFEIIKEDHTLGNLLRMQLLADRQVRFAGYMQPHPLENKIHIKVQTNGDN-TPVDALSTATEDLSQEMEGLREVFQEQVAAAK 108 R + ++L+DDEK++ Y D KIP+AGTF I KEDHT+GNLLRMQ+L +FAGY PHPL N+ +K+QT N TP+ A A EDL EM+ L F+EQVA K Sbjct: 6 RHKKYQLDDDEKRMTYKNDEKIPNAGTFTINKEDHTVGNLLRMQILRSPDTKFAGYQLPHPLMNECRVKIQTTSANLTPIGAFQRAIEDLQSEMDILDRNFREQVAKKK 114
BLAST of mRNA_L-elsbetiae_contig6854.15611.1 vs. uniprot
Match: B8C993_THAPS (Probable dna-directed RNA polymerase II 13.6 kDa polypeptide n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C993_THAPS) HSP 1 Score: 112 bits (281), Expect = 7.970e-30 Identity = 56/97 (57.73%), Postives = 70/97 (72.16%), Query Frame = 0 Query: 1 RSESWRLNDDEKKLAYTPDTKIPHAGTFEIIKEDHTLGNLLRMQLLADRQVRFAGYMQPHPLENKIHIKVQTNGDNT-PVDALSTATEDLSQEMEGL 96 RS ++ L+DDE+K+ Y PDTK+ +AGTF KEDHT+ NLLRMQLL D V+FAGYM PHPL +KIH+K+QT P + LS A EDLS E + L Sbjct: 6 RSSAFLLDDDEEKIEYQPDTKVSNAGTFTFNKEDHTVANLLRMQLLRDPAVKFAGYMHPHPLIHKIHLKIQTTTSQVAPAETLSAAIEDLSNETDHL 102
BLAST of mRNA_L-elsbetiae_contig6854.15611.1 vs. uniprot
Match: A0A7R9U3J4_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U3J4_9STRA) HSP 1 Score: 112 bits (279), Expect = 1.310e-29 Identity = 55/106 (51.89%), Postives = 76/106 (71.70%), Query Frame = 0 Query: 1 RSESWR--LNDDEKKLAYTPDTKIPHAGTFEIIKEDHTLGNLLRMQLLADRQVRFAGYMQPHPLENKIHIKVQTNGDNTPVDALSTATEDLSQEMEGLREVFQEQV 104 RSE W D+E K+ Y DTKIP+AGTF I++EDHTLGNLLRM+LL D+ VRFAGY+ PHPLE+ I ++VQ + TP+ +++ A + L Q+ + L + F+ QV Sbjct: 6 RSECWTSGYEDEENKVTYQKDTKIPNAGTFTIMREDHTLGNLLRMELLKDQNVRFAGYIAPHPLEHVIKLRVQAADNVTPIRSVTQAVDHLQQQFDTLSKSFESQV 111
BLAST of mRNA_L-elsbetiae_contig6854.15611.1 vs. uniprot
Match: A0A0K0DYM0_STRER (RNA_pol_L_2 domain-containing protein n=5 Tax=Strongyloididae TaxID=6246 RepID=A0A0K0DYM0_STRER) HSP 1 Score: 110 bits (276), Expect = 4.320e-29 Identity = 53/102 (51.96%), Postives = 69/102 (67.65%), Query Frame = 0 Query: 3 ESWRLNDDEKKLAYTPDTKIPHAGTFEIIKEDHTLGNLLRMQLLADRQVRFAGYMQPHPLENKIHIKVQTNGDNTPVDALSTATEDLSQEMEGLREVFQEQV 104 ES+ + D EKK+++ DTK+P+A FEI+KEDHTLGNLL+ QLL D V FAGY PHPLE+K H+++QT D TP L A DL E+ + F+E V Sbjct: 8 ESFLMLDGEKKISFEKDTKVPNAAIFEIVKEDHTLGNLLKHQLLKDPNVLFAGYRNPHPLEHKFHLRIQTTPDTTPTQVLLDAISDLIAELSMTEQYFKESV 109
BLAST of mRNA_L-elsbetiae_contig6854.15611.1 vs. uniprot
Match: RPB11_DICDI (DNA-directed RNA polymerase II subunit rpb11 n=1 Tax=Dictyostelium discoideum TaxID=44689 RepID=RPB11_DICDI) HSP 1 Score: 109 bits (272), Expect = 1.650e-28 Identity = 53/113 (46.90%), Postives = 76/113 (67.26%), Query Frame = 0 Query: 1 RSESWRLNDDEKKLAYTPDTKIPHAGTFEIIKEDHTLGNLLRMQLLADRQVRFAGYMQPHPLENKIHIKVQTNGDNTPVDALSTATEDLSQEMEGLREVFQEQVAAAKHAAEQ 113 R E + L D KK+ DTKIP+A F I+KEDHT+GNL+RMQL+AD+ + FAGY PHPLE+ ++I++QTN + P++ + + E LS+E L F EQV ++ A+Q Sbjct: 6 RFELFVLPDGAKKVTMVRDTKIPNASMFTILKEDHTIGNLIRMQLIADQDIIFAGYRMPHPLEHNVNIRIQTNNNTNPLECVQKSMECLSREFTSLENSFIEQVQKKRNVADQ 118 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6854.15611.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_L-elsbetiae_contig6854.15611.1 ID=prot_L-elsbetiae_contig6854.15611.1|Name=mRNA_L-elsbetiae_contig6854.15611.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=119bpback to top |