prot_L-elsbetiae_contig685.15608.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-elsbetiae_contig685.15608.1
Unique Name	prot_L-elsbetiae_contig685.15608.1
Type	polypeptide
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length	121

Homology

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BLAST of mRNA_L-elsbetiae_contig685.15608.1 vs. uniprot
Match: D8LG89_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LG89_ECTSI)

HSP 1 Score: 197 bits (501), Expect = 3.120e-63
Identity = 97/120 (80.83%), Postives = 109/120 (90.83%), Query Frame = 0

Query:    1 ARVCIGLSVPGIIFLIIIGLMFDKQGFYTSVDIHDSSAAASDCYFAALLYVVAIGVSFGGIWYEKSSRGFLATTQEELHHGDESAGLLSADDSSYGSLSYLSQMPLMPQGYSRSDNYVEG 120
            ARVCIGLS+PGIIFLIIIG+MFDKQGFYTSV++ D +AAAS+CYFAALLYVVAIGVS GGI Y+K+ RG L TTQEEL HGDES+GLL  +DS YGSL+YLSQMPLMPQGYSRSDNYV+G
Sbjct:    8 ARVCIGLSIPGIIFLIIIGIMFDKQGFYTSVEVDDPTAAASECYFAALLYVVAIGVSLGGICYDKNRRGMLVTTQEELAHGDESSGLLGREDSGYGSLTYLSQMPLMPQGYSRSDNYVDG 127

[Close]

BLAST of mRNA_L-elsbetiae_contig685.15608.1 vs. uniprot
Match: A0A836CCG9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCG9_9STRA)

HSP 1 Score: 49.3 bits (116), Expect = 3.740e-5
Identity = 24/68 (35.29%), Postives = 43/68 (63.24%), Query Frame = 0

Query:    1 ARVCIGLSVPGIIFLIIIGLMFDKQGFYTSVDIHD---SSAAASDCYFAALLYVVAIGVSFGGIWYEK 65
            ++ C  LS  GI+FL I+G++F++Q F+T+ +++    S  AA   Y+ A +Y + + +S  G+WY K
Sbjct:    8 SQCCCLLSGMGIVFLTILGILFEEQPFFTNPEVYHKDGSEEAAEAVYWGAFIYFITLLMSLYGMWYSK 75

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig685.15608.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig685.15608.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D8LG89_ECTSI	3.120e-63	80.83	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]
A0A836CCG9_9STRA	3.740e-5	35.29	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 43..63
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..5
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 64..120
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 23..42
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 6..22
None	No IPR available	TMHMM	TMhelix		coord: 44..63
None	No IPR available	TMHMM	TMhelix		coord: 5..22

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig685	contig	L-elsbetiae_contig685:32028..34270 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig685.15608.1	mRNA_L-elsbetiae_contig685.15608.1	Laminarionema elsbetiae ELsaHSoW15	mRNA	L-elsbetiae_contig685 32028..34270 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-elsbetiae_contig685.15608.1 ID=prot_L-elsbetiae_contig685.15608.1|Name=mRNA_L-elsbetiae_contig685.15608.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=121bp
ARVCIGLSVPGIIFLIIIGLMFDKQGFYTSVDIHDSSAAASDCYFAALLY
VVAIGVSFGGIWYEKSSRGFLATTQEELHHGDESAGLLSADDSSYGSLSY
LSQMPLMPQGYSRSDNYVEG*