mRNA_L-elsbetiae_contig685.15607.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig685.15607.1 vs. uniprot
Match: D8LG88_ECTSI (Ankyrin repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG88_ECTSI) HSP 1 Score: 647 bits (1669), Expect = 1.680e-216 Identity = 484/841 (57.55%), Postives = 535/841 (63.61%), Query Frame = 3 Query: 237 MEAPLHPTPMQRPMMKGKIYVDASNKPTFQGIWGMTHADVNKGGYTNDFKVVRMESVKEHEIGLPVFAGKYIGYFKLTTGFNTETVNEEFTLTFRGHSNHGYNVYGSGANRYGGNEIVGTVTQTGKMEIFKMIPGTTVQPDPSDPXXXXXXXXXXXXXXXXXAAAAPTARPLGMTPTARLGMXXXXXXXXXXXXXXXLKIGVNTKKKPVKRAPTAPPPSKNGLPGVHVKTLKDCLLTLKKTDKNQVFQFPVPANFRGLKGLYADVIKNPMDLGTVSKQIDSKYRTVKDCIADVRLVFSNAKEFNPDTDPVHALAASLSGKFEAFVSSHRSMLGLDGSTAGSGASNRSPIAGSGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTGVGLRDPTAGAAVAELSWEEQEQLAKDVNELFQIGNGNPLNEKAQSRVYALWTFAKAYVADKDRVAVDGGKGAEIKMDALNHVRQRQLRDVVTFFMNDMKNDPQPSKPTGTTDADLD------SGIGKVKPQEDRGKTITSSEGGSSSSARPGKRPRSD-VSDXXXXXXXXXXXXXXXXXVEGAEGAPLSKPSRDGS---EASKEASGDDEGKGKKLKPSNEPNGSIPAAGEGGXXXXXXXAAVAAPFGRVDSSNLTLEATASTLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSKAATTGKMDEQWLAAQAERKDREEREKARAESEKALXXXXXXXXXXXXXXXXXXGLKLSRERAAEKARVXXXXXXXXXXXXXXXXDKKEAERLAREGTKASVDLDQVRADSQLMELMDESVYDD 2729 ME PLHPTPMQRPMMKGKIYVDASNKPTFQGIWGMTHADVNK G+TNDFKVVRMESVKE E+GLPV+ G Y+GYFKLTTGF TETVNE FTLTFRGHSNHGYNVYG G NR+G EIVGTVTQTGKMEIFKM+PGTT+QPDP++ XXX ARPLG + + + K + KKK K+ PP SKNGLPG HV+TLKDCL+ LKK+DKN VFQ+PVP NFRGL+G+YADVIK+PMDLGTV K+IDSKYRT +DCIADVRLVFSNAK+FNPDTDPVHALAASLSGKFEAFVS HR +LGLD S P + SG DP AVA L+ EEQEQLAKDV ELF++GN NPLNEKAQ+RVYAL+TFAKAYV DKDRV +DGGKG +IKMDALNHVRQRQLRD+VTFF+ D NDP +G KVK + R S G+ +RPGKRPR+D VSD XXXXXXXXX +G +K SR GS SK A+ D G+G++ P PA GG PF RVDSS+LTLEATASTLK XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX GK DEQWL AQA RAE+EKAL XXXXXXXXXXXXXX +KKEAERLAR+GTKASVDLDQVRADS LMELMDES+YDD Sbjct: 1 METPLHPTPMQRPMMKGKIYVDASNKPTFQGIWGMTHADVNKSGHTNDFKVVRMESVKEQELGLPVYPGNYLGYFKLTTGFQTETVNESFTLTFRGHSNHGYNVYGFGENRFGKTEIVGTVTQTGKMEIFKMLPGTTLQPDPNETPPPLPRPANARAVSXXXXXXI--ARPLGGSSRGGVSLGGARP-----------KPSGSAKKKAQKKPLPPPPASKNGLPGPHVRTLKDCLMMLKKSDKNNVFQYPVPPNFRGLRGMYADVIKSPMDLGTVMKRIDSKYRTARDCIADVRLVFSNAKDFNPDTDPVHALAASLSGKFEAFVSGHRGVLGLDASA---------PTSSSG--------------------------------------------DP----AVAVLTAEEQEQLAKDVEELFRVGNANPLNEKAQARVYALYTFAKAYVLDKDRVTIDGGKGEQIKMDALNHVRQRQLRDIVTFFLADSLNDPXXXXXXXXXXXXXXXXXXTAAGKSKVKDEGTRTSGDGSDRAGAVPPSRPGKRPRTDDVSDSENDDLEXXXXXXXXX-----DGLSPAKRSRTGSITSPGSKGATRDVSGEGEQK-----PKAEAPALPVGGGGD---------PFSRVDSSSLTLEATASTLKDSEIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------------------GKRDEQWLQAQAXXXXXXXXXXXRAETEKALEEQRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAAALEKVNREKKELEEKKEAERLARQGTKASVDLDQVRADSNLMELMDESIYDD 732
BLAST of mRNA_L-elsbetiae_contig685.15607.1 vs. uniprot
Match: A0A6H5KQ78_9PHAE (Bromo domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ78_9PHAE) HSP 1 Score: 404 bits (1038), Expect = 4.270e-124 Identity = 366/711 (51.48%), Postives = 419/711 (58.93%), Query Frame = 3 Query: 615 MEIFKMIPGTTVQPDPSDPXXXXXXXXXXXXXXXXXAAAAPTARPLGMTPTARLGMXXXXXXXXXXXXXXXLKIGVNTKKKPVKRAPTAPPPSKNGLPGVHVKTLKDCLLTLKKTDKNQVFQFPVPANFRGLKGLYADVIKNPMDLGTVSKQIDSKYRTVKDCIADVRLVFSNAKEFNPDTDPVHALAASLSGKFEAFVSSHRSMLGLDGS--TAGSGASNRSPIAGSGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTGVGLRDPTAGAAVAELSWEEQEQLAKDVNELFQIGNGNPLNEKAQSRVYALWTFAKAYVADKDRVAVDGGKGAEIKMDALNHVRQRQLRDVVTFFMNDMKNDPQPSKPTGTTDADLDSGIGKVKPQEDRGKTITSSEGGSSSSARPGKRPRSD-VSDXXXXXXXXXXXXXXXXXVEGAEGAPLSKPSRDGS---EASKEASGDDEGKGKKLKPSNEPNGSIPAAGEGGXXXXXXXAAVAAPFGRVDSSNLTLEATASTLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSKAATTGKMDEQWLAAQAERKDREEREKARAESEKALXXXXXXXXXXXXXXXXXXGLKLSRERAAEKARVXXXXXXXXXXXXXXXXDKKEAERLAREGTKASVDLDQVRADSQLMELMDESVYDD 2729 M +M+PGTT+QPDP++ XXX ARPLG + L + K + KKK K+ PP SKNGLPG HV+TLKDCL+ LKK+DKN VFQ+PVP NFRGL+G+YADVIKNPMDLGTV K+IDSKYRT +DCIADVRLVFSNAK+FNPDTDPVHALAASLSGKFEAFVS HR +LGLD S T+ SG S + A S + XXXXXXXXXXX +++P AVA L+ EEQEQLAKDV ELF++GN NPLNEKAQ+RVYAL+TFAKAYV DKDRV +DGGKG +IKMDALNHVRQRQLRD+VTFF+ D NDP P+ + + T + G+ +RPGKRPR+D VSD X E +G +K SR GS SK A+ D G G + + P ++P G G PF RVDSS+LTLEATA TLK XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX GK DEQWL AE+EKAL XXXXXXXXXXXXX +KKEAERLAR+GTKASVDLDQVRADS LMELMDES+YDD Sbjct: 1 MVCTQMLPGTTLQPDPNETPPPLPRPANARAVSXXXXXXI--ARPLGGSSRGGLSVGGARP-----------KPSGSAKKKAHKKPLPPPPASKNGLPGPHVRTLKDCLMMLKKSDKNNVFQYPVPPNFRGLRGMYADVIKNPMDLGTVMKRIDSKYRTARDCIADVRLVFSNAKDFNPDTDPVHALAASLSGKFEAFVSGHRGVLGLDASAPTSSSGGSKSTITAPSIALPSSAGASAMGKRANVPQAAXXXXXXXXXXX----------VKEP----AVAVLTAEEQEQLAKDVEELFRVGNANPLNEKAQARVYALYTFAKAYVLDKDRVTIDGGKGEQIKMDALNHVRQRQLRDIVTFFLADSVNDPPPTPSSXXXXXXXXXXXXTAADKSKDTDEGTRTRAGAVPPSRPGKRPRTDDVSDSENDDLGEQDEX-----XEDEDGLSPAKRSRTGSITSPGSKGATRDVSGGGDQKSKAEAP--ALPLGGGGD------------PFSRVDSSSLTLEATAHTLKASGNEHMKDSEIDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------------GKRDEQWLQXXXXXXXXXXXXXXXAETEKALEEQRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAAALEKLNREKRELEEKKEAERLARQGTKASVDLDQVRADSNLMELMDESIYDD 653
BLAST of mRNA_L-elsbetiae_contig685.15607.1 vs. uniprot
Match: A0A6H5KRB2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRB2_9PHAE) HSP 1 Score: 239 bits (610), Expect = 1.590e-69 Identity = 114/131 (87.02%), Postives = 119/131 (90.84%), Query Frame = 3 Query: 237 MEAPLHPTPMQRPMMKGKIYVDASNKPTFQGIWGMTHADVNKGGYTNDFKVVRMESVKEHEIGLPVFAGKYIGYFKLTTGFNTETVNEEFTLTFRGHSNHGYNVYGSGANRYGGNEIVGTVTQTGKMEIFK 629 ME PLHPTPMQRPMMKG+IYVDASNKPTFQGIWGMTHADVNK G+TNDFKVVRMESVKE E GLPV+ G Y+GYFKLTTGF TETVNE FTLTFRGHSNHGYNVYG G NR+G EIVGTVTQTGKMEIFK Sbjct: 1 METPLHPTPMQRPMMKGRIYVDASNKPTFQGIWGMTHADVNKSGHTNDFKVVRMESVKEQERGLPVYPGNYLGYFKLTTGFQTETVNESFTLTFRGHSNHGYNVYGYGENRFGKTEIVGTVTQTGKMEIFK 131
BLAST of mRNA_L-elsbetiae_contig685.15607.1 vs. uniprot
Match: A0A7S0Q8A3_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0Q8A3_9EUKA) HSP 1 Score: 72.0 bits (175), Expect = 2.930e-11 Identity = 43/102 (42.16%), Postives = 62/102 (60.78%), Query Frame = 3 Query: 924 TLKDCLLTLKKT---DKNQVFQFPVPANFRGLKGLYADVIKNPMDLGTVSKQID-SKYRTVKDCIADVRLVFSNAKEFNPDTDPVHALAASLSGKFEAFVSS 1217 TL+ C L++T D + F PV G+ Y +I+ PMDLGT+ ++D S+YRTV+D +AD+RLVF NA+ +NP T V AA + +FE +SS Sbjct: 14 TLRQCASLLRQTKALDTRRYFALPVDPIALGIPD-YPLIIQEPMDLGTIEARLDTSEYRTVEDFVADIRLVFYNARIYNPATSDVVITAAKMEDEFEKKLSS 114
BLAST of mRNA_L-elsbetiae_contig685.15607.1 vs. uniprot
Match: A0A7S2RSC5_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2RSC5_9STRA) HSP 1 Score: 75.1 bits (183), Expect = 4.970e-10 Identity = 95/369 (25.75%), Postives = 147/369 (39.84%), Query Frame = 3 Query: 204 SAPEDT*PVATMEAPLHPTPMQRPMMKGKIYVDASNKPTFQGIWGMTHADVNKGGYTNDFKVVR--------MESVKEHEIGLPVFAGK-------YIGYFKLTTGFNTETVNEE--------------FTLTFRGHSNHGYNVYGSGANRYGGNEIVGT-VTQTGKMEIFKMIPGTTVQPDPSDPXXXXXXXXXXXXXXXXXAAAAPTARPLGMTPTARLGMXXXXXXXXXXXXXXXLKIGVNTKKKPVKRAPT--APPPSKNGLPGVHVKTLKDCLLTLKKTDKNQVFQFPVPANFRGLKGLYADVIKNPMDLGTVSKQIDSK-YRTVKDCIADVRLVFSNAKEFNPDTDPVHALAASLSGKFEAFV 1211 SAPE + AT P P + RP ++G + + + ++G WGM N GG T+ F R V + + G + GYF + + + E+ FTL V GSG N+YG + GT V +TG++ +++ V+P P AAA +P AR + ++ + + V+R P+ A G+ +K +K + L KTD++ F PV A GL Y ++IK PMDLGTV ++++ + Y + I DVRL F+NA +NPD V+ A L F+ V Sbjct: 48 SAPEVS--TATPTTPAKPVRL-RPALRGILRREVNGVVKWEGEWGMDDNSFN-GGVTSPFSYTRGSVSADQDSNDVPDEIVEAAEMEGSDLLQNALFSGYFLMMLNNKKKRIAEKNVLFEFCVDDSLPPFTLK----------VVGSGTNQYGHYTLEGTLVVKTGELNVYREYTPVGVKPTPRAAVVATPATRKGSRRASAVKAAAVIPKP-----KARAAVKKSAPAPAVE------RVTTANRNQRVRRLPSHLAEDNMDEGVAEDLIK-MKSVVRDLMKTDRDGWFGAPVDAEALGLAN-YHEIIKKPMDLGTVMRRLEGREYTGIDQVIDDVRLTFNNAITYNPDGHGVNIAARRLLNTFDTHV 389
BLAST of mRNA_L-elsbetiae_contig685.15607.1 vs. uniprot
Match: UPI0012637E49 (transcription factor GTE7-like n=2 Tax=Pistacia vera TaxID=55513 RepID=UPI0012637E49) HSP 1 Score: 71.6 bits (174), Expect = 4.140e-9 Identity = 50/122 (40.98%), Postives = 65/122 (53.28%), Query Frame = 3 Query: 849 KKKPVKRAPTAPPPSKNGLPGVHVKTLKDCLLTLKKTDKNQ---VFQFPVPANFRGLKGLYADVIKNPMDLGTVSKQIDSK-YRTVKDCIADVRLVFSNAKEFNPDTDPVHALAASLSGKFE 1202 +K+ K+ PTA V ++ C L K K++ VF PV L Y D+IKNPMDLGTV ++ K Y TV D ADVRL F+NA ++NP VH +A +L GKFE Sbjct: 179 QKRKQKKRPTA------------VSLMRSCSQILTKMMKHKHGWVFNEPVDVVSLSLHD-YHDIIKNPMDLGTVKLNLERKLYGTVLDFAADVRLTFNNALKYNPQGHDVHVMAETLLGKFE 287
BLAST of mRNA_L-elsbetiae_contig685.15607.1 vs. uniprot
Match: A0A8J5T5R5_ZIZPA (Bromo domain-containing protein n=1 Tax=Zizania palustris TaxID=103762 RepID=A0A8J5T5R5_ZIZPA) HSP 1 Score: 70.1 bits (170), Expect = 7.040e-9 Identity = 49/125 (39.20%), Postives = 70/125 (56.00%), Query Frame = 3 Query: 849 KKKPVKRAPTAP--PPSKNGLPGVHVKTLKDCLLTLKKTDKNQ---VFQFPVPANFRGLKGLYADVIKNPMDLGTVSKQIDSK-YRTVKDCIADVRLVFSNAKEFNPDTDPVHALAASLSGKFEA 1205 KK V PT P SKN + ++ L+ C LKK ++ +F PV G+ Y DVI+NPMDLGTV K++ +K Y + + ADVRL FSNA ++NP + VH +A L+ F++ Sbjct: 34 KKHGVTSVPTFDHQPASKNKVEPMNTSKLRQCGNVLKKLMDHEGGWLFHKPVDPVLYGIPD-YFDVIRNPMDLGTVKKKLTNKQYSSTDEFAADVRLTFSNAMKYNPPGNDVHNIADQLNRLFDS 157
BLAST of mRNA_L-elsbetiae_contig685.15607.1 vs. uniprot
Match: A0A371F922_MUCPR (Transcription factor GTE3, chloroplastic (Fragment) n=1 Tax=Mucuna pruriens TaxID=157652 RepID=A0A371F922_MUCPR) HSP 1 Score: 71.2 bits (173), Expect = 7.070e-9 Identity = 42/96 (43.75%), Postives = 56/96 (58.33%), Query Frame = 3 Query: 927 LKDCLLTLKKTDKNQ---VFQFPVPANFRGLKGLYADVIKNPMDLGTVSKQI-DSKYRTVKDCIADVRLVFSNAKEFNPDTDPVHALAASLSGKFE 1202 +KDC L LKK K++ +F PV GL Y D+IK PMDLGTV + ++KY T D +DVRL F+NA +NP V+ +A L +FE Sbjct: 153 MKDCALVLKKLMKHKHGWIFNVPVDVVGMGLHDYY-DIIKKPMDLGTVKSNLSENKYMTPSDFASDVRLTFNNALTYNPKGHDVYTMAEQLLTRFE 247
BLAST of mRNA_L-elsbetiae_contig685.15607.1 vs. uniprot
Match: A0A0E0EBU9_9ORYZ (Bromo domain-containing protein n=1 Tax=Oryza meridionalis TaxID=40149 RepID=A0A0E0EBU9_9ORYZ) HSP 1 Score: 68.6 bits (166), Expect = 7.970e-9 Identity = 44/111 (39.64%), Postives = 64/111 (57.66%), Query Frame = 3 Query: 885 PPSKNGLPGVHVKTLKDCLLTLKKTDKNQ---VFQFPVPANFRGLKGLYADVIKNPMDLGTVSKQIDSK-YRTVKDCIADVRLVFSNAKEFNPDTDPVHALAASLSGKFEA 1205 P SKN + ++ + C LKK ++ +F PV G+ Y DVI+NPMDLGTV +++ SK Y + ADVRL FSNA ++NP + VHA+A L+ F++ Sbjct: 90 PTSKNKIDPMNTSKSRQCGSILKKLMDHKSGWIFNTPVDPVVYGIPD-YFDVIRNPMDLGTVKRKLTSKQYSNPYEFAADVRLTFSNAMKYNPPGNDVHAIADQLNKIFDS 199
BLAST of mRNA_L-elsbetiae_contig685.15607.1 vs. uniprot
Match: A0A1U7XY25_NICSY (transcription factor GTE4-like n=7 Tax=Nicotiana TaxID=4085 RepID=A0A1U7XY25_NICSY) HSP 1 Score: 70.5 bits (171), Expect = 1.250e-8 Identity = 43/96 (44.79%), Postives = 56/96 (58.33%), Query Frame = 3 Query: 927 LKDCLLTLKKTDKNQ---VFQFPVPANFRGLKGLYADVIKNPMDLGTVSKQIDSK-YRTVKDCIADVRLVFSNAKEFNPDTDPVHALAASLSGKFE 1202 LK+C L++ K++ VF PV GL Y D+IKNPMDLGTV ++D+ Y++ KD DVRL F NA +NP VH +A LS FE Sbjct: 235 LKNCRALLERLMKHKHGWVFNQPVDTKGLGLHD-YFDIIKNPMDLGTVKSRLDTNCYKSPKDFAEDVRLTFQNAMTYNPKGQDVHMMAEQLSKIFE 329 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig685.15607.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig685.15607.1 >prot_L-elsbetiae_contig685.15607.1 ID=prot_L-elsbetiae_contig685.15607.1|Name=mRNA_L-elsbetiae_contig685.15607.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=832bp MEAPLHPTPMQRPMMKGKIYVDASNKPTFQGIWGMTHADVNKGGYTNDFKback to top mRNA from alignment at L-elsbetiae_contig685:14592..30151- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig685.15607.1 ID=mRNA_L-elsbetiae_contig685.15607.1|Name=mRNA_L-elsbetiae_contig685.15607.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=15560bp|location=Sequence derived from alignment at L-elsbetiae_contig685:14592..30151- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig685:14592..30151- >mRNA_L-elsbetiae_contig685.15607.1 ID=mRNA_L-elsbetiae_contig685.15607.1|Name=mRNA_L-elsbetiae_contig685.15607.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=4992bp|location=Sequence derived from alignment at L-elsbetiae_contig685:14592..30151- (Laminarionema elsbetiae ELsaHSoW15)back to top |