mRNA_L-elsbetiae_contig6838.15599.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig6838.15599.1
Unique NamemRNA_L-elsbetiae_contig6838.15599.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig6838.15599.1 vs. uniprot
Match: A0A6H5K9N1_9PHAE (Abhydrolase_2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9N1_9PHAE)

HSP 1 Score: 151 bits (381), Expect = 2.860e-44
Identity = 73/83 (87.95%), Postives = 78/83 (93.98%), Query Frame = 1
Query:    1 VIFLHGSGDTGRGVREWLSSASGGKFEQALADLGLGPVVYPTAPERRYTLAGGAPSTVWFDRERLHPGSRQDRAGIQRSLRQV 249
            VIFLHGSGDTGRGVR+WLSSASGGKF +A+A+LGLG VVYPTAPERRYTLAGGAPSTVWFDRERL PGS QDRAG+ RSLRQV
Sbjct:   12 VIFLHGSGDTGRGVRDWLSSASGGKFNRAIAELGLGEVVYPTAPERRYTLAGGAPSTVWFDRERLSPGSPQDRAGVLRSLRQV 94          
BLAST of mRNA_L-elsbetiae_contig6838.15599.1 vs. uniprot
Match: D8LB84_ECTSI (GI23857 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB84_ECTSI)

HSP 1 Score: 148 bits (374), Expect = 2.200e-42
Identity = 72/83 (86.75%), Postives = 78/83 (93.98%), Query Frame = 1
Query:    1 VIFLHGSGDTGRGVREWLSSASGGKFEQALADLGLGPVVYPTAPERRYTLAGGAPSTVWFDRERLHPGSRQDRAGIQRSLRQV 249
            VIFLHGSGDTG GVR+WLSSASGGKF++A+A+LGLG VVYPTAPERRYTLAGGA STVWFDRERL PGSRQDRAG+ RSLRQV
Sbjct:   12 VIFLHGSGDTGGGVRDWLSSASGGKFDRAIAELGLGEVVYPTAPERRYTLAGGAVSTVWFDRERLSPGSRQDRAGVLRSLRQV 94          
BLAST of mRNA_L-elsbetiae_contig6838.15599.1 vs. uniprot
Match: A0A7S4S2G1_9DINO (Hypothetical protein n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4S2G1_9DINO)

HSP 1 Score: 91.3 bits (225), Expect = 1.410e-20
Identity = 47/83 (56.63%), Postives = 56/83 (67.47%), Query Frame = 1
Query:    1 VIFLHGSGDTGRGVREWLSSASGGKFEQALADLGLGPVVYPTAPERRYTLAGGAPSTVWFDRERLHPGSRQDRAGIQRSLRQV 249
            +IFLHGSGD G G+R+WL+S SGG FE+ L   G+  VVYP AP   YTL GG P  VWFDR  L   + +D AG+ RSL QV
Sbjct:   35 LIFLHGSGDCGAGIRDWLASTSGGDFERRLTAAGV-KVVYPDAPAVPYTLNGGYPQNVWFDRVALAYNAPEDVAGVARSLEQV 116          
BLAST of mRNA_L-elsbetiae_contig6838.15599.1 vs. uniprot
Match: A0A812WYN6_SYMPI (LYPLAL1 protein n=1 Tax=Symbiodinium pilosum TaxID=2952 RepID=A0A812WYN6_SYMPI)

HSP 1 Score: 81.6 bits (200), Expect = 5.670e-17
Identity = 42/83 (50.60%), Postives = 57/83 (68.67%), Query Frame = 1
Query:    1 VIFLHGSGDTGRGVREWLSSASGGKFEQALADLGLGPVVYPTAPERRYTLAGGAPSTVWFDRERLHPGSRQDRAGIQRSLRQV 249
            +IFLHGSGDTG GV+ WL + SGG FE +LA  G+  +++PTA    Y+L GG P TVWFDR  +   + +D AG++RS+  V
Sbjct:   33 LIFLHGSGDTGEGVQAWLHAVSGGAFEASLAREGIS-MLFPTATMIPYSLIGGMPRTVWFDRVAMAYEAPEDVAGLKRSVELV 114          
BLAST of mRNA_L-elsbetiae_contig6838.15599.1 vs. uniprot
Match: A0A812M591_9DINO (LYPLAL1 protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812M591_9DINO)

HSP 1 Score: 80.9 bits (198), Expect = 7.390e-17
Identity = 42/83 (50.60%), Postives = 56/83 (67.47%), Query Frame = 1
Query:    1 VIFLHGSGDTGRGVREWLSSASGGKFEQALADLGLGPVVYPTAPERRYTLAGGAPSTVWFDRERLHPGSRQDRAGIQRSLRQV 249
            +IFLHGSGDTG GV+ WL + S G FE +LA  G+  + +PTAP   Y+L GGAP TVWFDR  +   + +D  G++RS+  V
Sbjct:    8 LIFLHGSGDTGEGVQAWLHAVSDGAFEASLARDGI-ILQFPTAPRIPYSLIGGAPQTVWFDRVAMAYEAPEDVPGLKRSVELV 89          
BLAST of mRNA_L-elsbetiae_contig6838.15599.1 vs. uniprot
Match: A0A812WHJ6_9DINO (LYPLAL1 protein n=5 Tax=Symbiodinium TaxID=2949 RepID=A0A812WHJ6_9DINO)

HSP 1 Score: 79.0 bits (193), Expect = 2.750e-15
Identity = 41/83 (49.40%), Postives = 55/83 (66.27%), Query Frame = 1
Query:    1 VIFLHGSGDTGRGVREWLSSASGGKFEQALADLGLGPVVYPTAPERRYTLAGGAPSTVWFDRERLHPGSRQDRAGIQRSLRQV 249
            +IFLHGSGDTG GV+ WL + SGG FE +LA  G+  + +PTA    Y+L GG P TVWFDR  +   + +D  G++RS+  V
Sbjct:  976 LIFLHGSGDTGEGVQGWLHAISGGAFEASLAREGIA-MQFPTAARIPYSLIGGMPQTVWFDRVAMAYEAPEDVPGLKRSVELV 1057          
BLAST of mRNA_L-elsbetiae_contig6838.15599.1 vs. uniprot
Match: A0A6S9FEU7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9FEU7_HETAK)

HSP 1 Score: 77.4 bits (189), Expect = 6.500e-15
Identity = 43/86 (50.00%), Postives = 58/86 (67.44%), Query Frame = 1
Query:    1 VIFLHGSGDTGRGVREWLSSAS--GGKFE-QALADLGLGPVVYPTAPERRYTLAGGAPSTVWFDRERLHPGSRQDRAGIQRSLRQV 249
            VIFLHGSGDTG G++ WLS     GG+FE + L + G+  V++PTA  + Y+L  GA  +VWFDR  LHP + +D  GI+ SL Q+
Sbjct:   17 VIFLHGSGDTGEGIKAWLSDEKVWGGQFESKLLMEHGI-RVIFPTARAKYYSL-WGATGSVWFDRSELHPSAPEDIDGIEESLMQI 100          
BLAST of mRNA_L-elsbetiae_contig6838.15599.1 vs. uniprot
Match: A0A812J694_SYMMI (LYPLAL1 protein n=2 Tax=Symbiodinium TaxID=2949 RepID=A0A812J694_SYMMI)

HSP 1 Score: 77.0 bits (188), Expect = 1.300e-14
Identity = 39/80 (48.75%), Postives = 53/80 (66.25%), Query Frame = 1
Query:    1 VIFLHGSGDTGRGVREWLSSASGGKFEQALADLGLGPVVYPTAPERRYTLAGGAPSTVWFDRERLHPGSRQDRAGIQRSL 240
            +IFLHGSGDTG GV+ WL + SGG FE +LA  G+  + +PTA    Y+L GG P TVWFDR  +   + +D  G++R +
Sbjct:  976 LIFLHGSGDTGEGVQGWLHAISGGAFEASLAREGIA-MQFPTAARIPYSLIGGMPQTVWFDRVAMAYEAPEDVPGLKRCI 1054          
BLAST of mRNA_L-elsbetiae_contig6838.15599.1 vs. uniprot
Match: UPI001B88763C (lysophospholipase-like protein 1 n=1 Tax=Gigantopelta aegis TaxID=1735272 RepID=UPI001B88763C)

HSP 1 Score: 74.7 bits (182), Expect = 1.810e-14
Identity = 38/67 (56.72%), Postives = 47/67 (70.15%), Query Frame = 1
Query:    1 VIFLHGSGDTGRGVREWLSSASGGKFEQALADLGLGPVVYPTAPERRYTLAGGAPSTVWFDRERLHP 201
            VIFLHGSGDTG G+R+WL S  G +F  A   L    V++PTAP R Y+  GGA STVWFDR+++ P
Sbjct:   25 VIFLHGSGDTGPGIRQWLQSVLGEEF--AFPHL---RVIFPTAPPRPYSPMGGAVSTVWFDRDQISP 86          
BLAST of mRNA_L-elsbetiae_contig6838.15599.1 vs. uniprot
Match: A0A210QNP8_MIZYE (Palmitoyl-protein hydrolase n=1 Tax=Mizuhopecten yessoensis TaxID=6573 RepID=A0A210QNP8_MIZYE)

HSP 1 Score: 74.3 bits (181), Expect = 2.620e-14
Identity = 38/67 (56.72%), Postives = 45/67 (67.16%), Query Frame = 1
Query:    1 VIFLHGSGDTGRGVREWLSSASGGKFEQALADLGLGPVVYPTAPERRYTLAGGAPSTVWFDRERLHP 201
            V+FLHGSGDTG GV EW++ AS G+F    A      V+YPTAP R YT  GGA S VWFDR ++ P
Sbjct:   25 VLFLHGSGDTGDGVSEWVTMASRGEFHFPHAK-----VLYPTAPLRHYTPMGGAMSNVWFDRMQISP 86          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6838.15599.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K9N1_9PHAE2.860e-4487.95Abhydrolase_2 domain-containing protein n=1 Tax=Ec... [more]
D8LB84_ECTSI2.200e-4286.75GI23857 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
A0A7S4S2G1_9DINO1.410e-2056.63Hypothetical protein n=1 Tax=Alexandrium monilatum... [more]
A0A812WYN6_SYMPI5.670e-1750.60LYPLAL1 protein n=1 Tax=Symbiodinium pilosum TaxID... [more]
A0A812M591_9DINO7.390e-1750.60LYPLAL1 protein n=1 Tax=Symbiodinium natans TaxID=... [more]
A0A812WHJ6_9DINO2.750e-1549.40LYPLAL1 protein n=5 Tax=Symbiodinium TaxID=2949 Re... [more]
A0A6S9FEU7_HETAK6.500e-1550.00Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A812J694_SYMMI1.300e-1448.75LYPLAL1 protein n=2 Tax=Symbiodinium TaxID=2949 Re... [more]
UPI001B88763C1.810e-1456.72lysophospholipase-like protein 1 n=1 Tax=Gigantope... [more]
A0A210QNP8_MIZYE2.620e-1456.72Palmitoyl-protein hydrolase n=1 Tax=Mizuhopecten y... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6838contigL-elsbetiae_contig6838:977..1225 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score148.7
Seed ortholog evalue1.2e-33
Seed eggNOG ortholog2880.D8LB84
Preferred nameLYPLAL1
KEGG koko:K06999
Hectar predicted targeting categoryother localisation
GOsGO:0002084,GO:0003674,GO:0003824,GO:0004620,GO:0004622,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0008474,GO:0009056,GO:0009057,GO:0009987,GO:0016298,GO:0016787,GO:0016788,GO:0016790,GO:0019538,GO:0030163,GO:0032879,GO:0032880,GO:0035601,GO:0036211,GO:0042157,GO:0042159,GO:0042996,GO:0042997,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051049,GO:0051051,GO:0051223,GO:0051224,GO:0052689,GO:0060341,GO:0060627,GO:0065007,GO:0070201,GO:0071704,GO:0090087,GO:0098599,GO:0098732,GO:0098734,GO:0140096,GO:1901564,GO:1901565,GO:1901575,GO:1903076,GO:1903077,GO:1903827,GO:1903828,GO:1904375,GO:1904376,GO:1904950,GO:1905475,GO:1905476
EggNOG free text desc.acyl-protein thioesterase
EggNOG OGsCOG0400@1,KOG2112@2759
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000
Exons1
Model size249
Cds size249
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816757.392505-CDS-L-elsbetiae_contig6838:976..12251622816757.392505-CDS-L-elsbetiae_contig6838:976..1225Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6838 977..1225 -
1691683790.47835-CDS-L-elsbetiae_contig6838:976..12251691683790.47835-CDS-L-elsbetiae_contig6838:976..1225Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6838 977..1225 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6838.15599.1prot_L-elsbetiae_contig6838.15599.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig6838 977..1225 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig6838.15599.1

>prot_L-elsbetiae_contig6838.15599.1 ID=prot_L-elsbetiae_contig6838.15599.1|Name=mRNA_L-elsbetiae_contig6838.15599.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=83bp
VIFLHGSGDTGRGVREWLSSASGGKFEQALADLGLGPVVYPTAPERRYTL
AGGAPSTVWFDRERLHPGSRQDRAGIQRSLRQV
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mRNA from alignment at L-elsbetiae_contig6838:977..1225-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig6838.15599.1 ID=mRNA_L-elsbetiae_contig6838.15599.1|Name=mRNA_L-elsbetiae_contig6838.15599.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=249bp|location=Sequence derived from alignment at L-elsbetiae_contig6838:977..1225- (Laminarionema elsbetiae ELsaHSoW15)
GTGATCTTCCTCCATGGGAGCGGCGACACTGGCCGCGGCGTGCGGGAGTG GCTGAGCTCGGCGTCGGGGGGAAAGTTCGAGCAGGCGCTCGCCGACCTAG GCCTCGGGCCGGTAGTGTACCCGACGGCTCCGGAGAGGCGCTACACTCTC GCGGGAGGGGCGCCGTCCACGGTGTGGTTCGACCGGGAGAGATTACACCC AGGGTCCCGGCAGGATCGCGCAGGCATTCAGCGGTCTTTGCGGCAGGTG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig6838:977..1225-

>mRNA_L-elsbetiae_contig6838.15599.1 ID=mRNA_L-elsbetiae_contig6838.15599.1|Name=mRNA_L-elsbetiae_contig6838.15599.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=498bp|location=Sequence derived from alignment at L-elsbetiae_contig6838:977..1225- (Laminarionema elsbetiae ELsaHSoW15)
GTGATCTTCCTCCATGGGAGCGGCGACACTGGCCGCGGCGTGCGGGAGTG
GCTGAGCTCGGCGTCGGGGGGAAAGTTCGAGCAGGCGCTCGCCGACCTAG
GCCTCGGGCCGGTAGTGTACCCGACGGCTCCGGAGAGGCGCTACACTCTC
GCGGGAGGGGCGCCGTCCACGGTGTGGTTCGACCGGGAGAGATTACACCC
AGGGTCCCGGCAGGATCGCGCAGGCATTCAGCGGTCTTTGCGGCAGGTGG
TGATCTTCCTCCATGGGAGCGGCGACACTGGCCGCGGCGTGCGGGAGTGG
CTGAGCTCGGCGTCGGGGGGAAAGTTCGAGCAGGCGCTCGCCGACCTAGG
CCTCGGGCCGGTAGTGTACCCGACGGCTCCGGAGAGGCGCTACACTCTCG
CGGGAGGGGCGCCGTCCACGGTGTGGTTCGACCGGGAGAGATTACACCCA
GGGTCCCGGCAGGATCGCGCAGGCATTCAGCGGTCTTTGCGGCAGGTG
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