mRNA_L-elsbetiae_contig6823.15582.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig6823.15582.1
Unique NamemRNA_L-elsbetiae_contig6823.15582.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig6823.15582.1 vs. uniprot
Match: A0A6H5LJ37_9PHAE (AAA domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LJ37_9PHAE)

HSP 1 Score: 313 bits (803), Expect = 1.660e-97
Identity = 158/183 (86.34%), Postives = 166/183 (90.71%), Query Frame = 2
Query:  608 RAFLLFVDEADAFLRRRNTETISEDLLNALNAFLYRTGESTDKFMLVYASNQPEQFDWAVNDRIDEMVPFGLLGREERLRMVNFYMKIYLLDPPGRAKIITMDGVAHSHLQEVADLTEGLSGREIAKLAIAWQAAAYGTSDSSFTAELMTEVLDAHLQQKRQKQAWLEGAQTSSGG*LCPPPT 1156
            +  LLFVDEADAFLRRRNTETISEDL NALNAFLYRTGESTDKFMLVYASNQPEQFDWAVNDRIDEMV F L GREERLRMVN YMK YLLDPPG+AK+I +DG+  SHLQ+VADLTEG SGREIAKLAIAWQAAAYGT DSSF AELMTEVL AHLQQKRQKQAWLEGAQTSSGG + PPP+
Sbjct:  413 KGLLLFVDEADAFLRRRNTETISEDLRNALNAFLYRTGESTDKFMLVYASNQPEQFDWAVNDRIDEMVRFDLPGREERLRMVNLYMKNYLLDPPGKAKVIRVDGIEDSHLQDVADLTEGFSGREIAKLAIAWQAAAYGTPDSSFNAELMTEVLQAHLQQKRQKQAWLEGAQTSSGGLIMPPPS 595          
BLAST of mRNA_L-elsbetiae_contig6823.15582.1 vs. uniprot
Match: A0A835YR91_9STRA (AAA domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YR91_9STRA)

HSP 1 Score: 264 bits (675), Expect = 1.190e-78
Identity = 141/207 (68.12%), Postives = 160/207 (77.29%), Query Frame = 1
Query:    1 GIKPAGGTLAAGMQEFLSDKDQMVAATATLTAMALGIYTARTGTGPAFLTQPSPPPNTTFPCRNLGVAGRYIEARLGKPPLLRETSRPTSFETVRNPVPTIKRAFGMHKVEDALSGVVLEKSLETRLSRVAQSTFNTKRNNAPFQHLLLYGPPGAGKTLFAKGLARHSGLEYAIMTGGDIAPLGRDAVTEMQKVFDCAQASRKGLSL 621
            GIK AG TL  G++ FL DK++M+AAT TLTA+ALGIYTA+TGTG                     VAGRY+EARLGKP L+RETS+ +  E ++NP+P+ KRAFG  K  +AL GVVLE  LETRLSRVAQSTFNTK+N APF+HLLLYGPPG GKTLFAKGLARHSGLEYAIMTGGDIAPLGRDAVTEM K+FD AQAS KGL L
Sbjct:  218 GIKLAGETLGTGIKTFLGDKEKMLAATTTLTAVALGIYTAKTGTG---------------------VAGRYLEARLGKPSLVRETSKRSVSEVIKNPIPSFKRAFGFLKPSNALEGVVLEPKLETRLSRVAQSTFNTKKNKAPFRHLLLYGPPGTGKTLFAKGLARHSGLEYAIMTGGDIAPLGRDAVTEMHKLFDWAQASNKGLLL 403          
BLAST of mRNA_L-elsbetiae_contig6823.15582.1 vs. uniprot
Match: A0A7S2D4S5_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2D4S5_9STRA)

HSP 1 Score: 233 bits (594), Expect = 8.860e-68
Identity = 127/207 (61.35%), Postives = 148/207 (71.50%), Query Frame = 1
Query:    1 GIKPAGGTLAAGMQEFLSDKDQMVAATATLTAMALGIYTARTGTGPAFLTQPSPPPNTTFPCRNLGVAGRYIEARLGKPPLLRETSRPTSFETVRNPVPTIKRAFGMHKVEDALSGVVLEKSLETRLSRVAQSTFNTKRNNAPFQHLLLYGPPGAGKTLFAKGLARHSGLEYAIMTGGDIAPLGRDAVTEMQKVFDCAQASRKGLSL 621
            GIK AG TL  G + FLSDK++M AA ATL+A+ALG+Y+A+ GTG                     VAGRY+EARLGKP L+RETSR +    +R+PV T+KR        +ALSGVVLE  L  RLSRVA ST NTKRN APF+HLLLYGPPG GKT+FAKGLAR SGLEYAI+TGGD+APLGRDAVTE+ KVFD A  S+KGL L
Sbjct:  150 GIKLAGSTLGEGARAFLSDKEKMAAAVATLSAIALGVYSAKVGTG---------------------VAGRYVEARLGKPSLVRETSRSSVLADLRSPVATMKRIMASTDASEALSGVVLEPKLADRLSRVATSTSNTKRNKAPFRHLLLYGPPGTGKTMFAKGLARSSGLEYAILTGGDVAPLGRDAVTEIHKVFDWANTSKKGLLL 335          
BLAST of mRNA_L-elsbetiae_contig6823.15582.1 vs. uniprot
Match: A0A7S2Y4I1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y4I1_9STRA)

HSP 1 Score: 218 bits (554), Expect = 3.690e-65
Identity = 116/178 (65.17%), Postives = 134/178 (75.28%), Query Frame = 2
Query:  608 RAFLLFVDEADAFLRRRNTETISEDLLNALNAFLYRTGESTDKFMLVYASNQPEQFDWAVNDRIDEMVPFGLLGREERLRMVNFYMKIYLLDPPGRAK--IITMDGVAHSHLQEVADLTEGLSGREIAKLAIAWQAAAYGTSDSSFTAELMTEVLDAHLQQKRQKQAWLEGAQTSSGG 1135
            +  LLFVDEADAFLRRR+ E ISEDL NALNAFLYRTGE+T KFMLVYASNQP+QFDWA+NDRIDEMV F L G EER RMV+ YMK YLLD    AK   IT++ +  +H+ E A  TE  SGREIAKLAIAWQAAAYG+ D++F   +M  VL+ H  QK QK+AWL+     SGG
Sbjct:   53 KGLLLFVDEADAFLRRRSVEHISEDLRNALNAFLYRTGEATGKFMLVYASNQPDQFDWAINDRIDEMVEFQLPGLEERKRMVSLYMKKYLLDQQDAAKGRAITVEDIEDNHIDEAAKATEHFSGREIAKLAIAWQAAAYGSVDATFNPSIMRSVLEVHCLQKAQKEAWLK----KSGG 226          
BLAST of mRNA_L-elsbetiae_contig6823.15582.1 vs. uniprot
Match: A0A7S2WW12_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WW12_9STRA)

HSP 1 Score: 216 bits (549), Expect = 1.940e-64
Identity = 109/174 (62.64%), Postives = 136/174 (78.16%), Query Frame = 2
Query:  608 RAFLLFVDEADAFLRRRNTETISEDLLNALNAFLYRTGESTDKFMLVYASNQPEQFDWAVNDRIDEMVPFGLLGREERLRMVNFYMKIYLLDP--------PGRAKIITMDGVAHSHLQEVADLTEGLSGREIAKLAIAWQAAAYGTSDSSFTAELMTEVLDAHLQQKRQKQAW 1105
            R  LLF+DE+DAFLR+R+TE +SEDL NALNAFLYRTGE T+KFMLVYASNQPEQFDWA+NDRIDEMV F L  +EER+RM+  YM  YL           P   KI+ ++GV  S+++ +AD TEG SGREI+KLAIAWQAAAYG++D++FT ELM  VL+AH++QK++K  W
Sbjct:   65 RGLLLFIDESDAFLRKRSTEAMSEDLRNALNAFLYRTGEPTNKFMLVYASNQPEQFDWAINDRIDEMVEFALPSKEERVRMIQLYMDKYLYRSGEGGGFFSPASTKIL-VNGVEDSNIESIADRTEGFSGREISKLAIAWQAAAYGSADATFTVELMESVLEAHIEQKQRKAQW 237          
BLAST of mRNA_L-elsbetiae_contig6823.15582.1 vs. uniprot
Match: A0A7S2ME04_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2ME04_9STRA)

HSP 1 Score: 226 bits (575), Expect = 2.240e-64
Identity = 125/207 (60.39%), Postives = 149/207 (71.98%), Query Frame = 1
Query:    1 GIKPAGGTLAAGMQEFLSDKDQMVAATATLTAMALGIYTARTGTGPAFLTQPSPPPNTTFPCRNLGVAGRYIEARLGKPPLLRETSRPTSFETVRNPVPTIKRAFGMHKVEDALSGVVLEKSLETRLSRVAQSTFNTKRNNAPFQHLLLYGPPGAGKTLFAKGLARHSGLEYAIMTGGDIAPLGRDAVTEMQKVFDCAQASRKGLSL 621
            GIK AG T  AG++ FLSDKD+M+AA  T++A+A G+YTA+ GT                      VAGRYIEARLGKP L+RETSR +  +++R P   ++      K  DAL+GVVLEK L  RLSRVA ST NTKRN APF+HLLLYGPPG GKTLFAKGLA+HSGLEYAI+TGGD+APLGRDAVTE+ KVFD AQ SR+G+ L
Sbjct:  216 GIKLAGETFGAGVRGFLSDKDRMLAAVGTVSAIAAGVYTAKVGTS---------------------VAGRYIEARLGKPSLIRETSRISLTQSIRRPWTLLQSG----KKGDALAGVVLEKDLSERLSRVATSTANTKRNKAPFRHLLLYGPPGTGKTLFAKGLAKHSGLEYAILTGGDVAPLGRDAVTEIHKVFDWAQTSRRGVLL 397          
BLAST of mRNA_L-elsbetiae_contig6823.15582.1 vs. uniprot
Match: A0A4D9D134_9STRA (AAA domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D134_9STRA)

HSP 1 Score: 224 bits (570), Expect = 1.830e-63
Identity = 119/207 (57.49%), Postives = 150/207 (72.46%), Query Frame = 1
Query:    1 GIKPAGGTLAAGMQEFLSDKDQMVAATATLTAMALGIYTARTGTGPAFLTQPSPPPNTTFPCRNLGVAGRYIEARLGKPPLLRETSRPTSFETVRNPVPTIKRAFGMHKVEDALSGVVLEKSLETRLSRVAQSTFNTKRNNAPFQHLLLYGPPGAGKTLFAKGLARHSGLEYAIMTGGDIAPLGRDAVTEMQKVFDCAQASRKGLSL 621
            GIK A   L  G+QEFL+DK+++ +A  TL+A+ALG+Y A+T TG                     VAGRYIEARLGKP L+R+TSR T+ + +RNPVP+++R     K EDAL GVVLEK L  RL+RVA ST NTK N APF++LLL+GPPG GKTLFAKGLA +SGL+YAI+TGGD+APLG++AVTE+ KVFD A  +RKG+ L
Sbjct:  223 GIKLASTELGKGLQEFLTDKERLTSAAVTLSAVALGVYAAKTSTG---------------------VAGRYIEARLGKPSLVRDTSRRTALQVLRNPVPSLRRLLSTTKAEDALKGVVLEKGLTERLTRVAISTANTKANGAPFRNLLLHGPPGTGKTLFAKGLAANSGLDYAILTGGDVAPLGKEAVTEIHKVFDWAGTTRKGVLL 408          
BLAST of mRNA_L-elsbetiae_contig6823.15582.1 vs. uniprot
Match: A0A2D4BKB9_PYTIN (ATPase family AAA domain-containing protein 3A n=2 Tax=Pythium TaxID=4797 RepID=A0A2D4BKB9_PYTIN)

HSP 1 Score: 223 bits (568), Expect = 2.490e-63
Identity = 119/207 (57.49%), Postives = 145/207 (70.05%), Query Frame = 1
Query:    1 GIKPAGGTLAAGMQEFLSDKDQMVAATATLTAMALGIYTARTGTGPAFLTQPSPPPNTTFPCRNLGVAGRYIEARLGKPPLLRETSRPTSFETVRNPVPTIKRAFGMHKVEDALSGVVLEKSLETRLSRVAQSTFNTKRNNAPFQHLLLYGPPGAGKTLFAKGLARHSGLEYAIMTGGDIAPLGRDAVTEMQKVFDCAQASRKGLSL 621
            GIK AG T+ AG+  F+ DK+++    A+LTA+ALGIYTA+  T                      VAG+YIEARLGKP L+RETSR +  + V NP+P+I+R   + K  DAL GVVLE  L+ RL  VA STFNTK+N APF+HLLL+GPPG GKTLFAK LARHSGLEYAIMTGGD+APLGR+ VTE+ K+FD A  SR+GL L
Sbjct:  216 GIKLAGSTVGAGIMTFVDDKEKLTTTVASLTALALGIYTAKVSTN---------------------VAGKYIEARLGKPSLVRETSRRSVAQVVSNPLPSIRRVLRLQKPHDALEGVVLEPKLDERLRSVAVSTFNTKKNRAPFRHLLLHGPPGTGKTLFAKALARHSGLEYAIMTGGDVAPLGREGVTEIHKLFDWATHSRRGLLL 401          
BLAST of mRNA_L-elsbetiae_contig6823.15582.1 vs. uniprot
Match: A0A0P1A5E7_PLAHL (Atpase family aaa domain-containing protein 3 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A5E7_PLAHL)

HSP 1 Score: 223 bits (568), Expect = 2.810e-63
Identity = 119/206 (57.77%), Postives = 144/206 (69.90%), Query Frame = 1
Query:    4 IKPAGGTLAAGMQEFLSDKDQMVAATATLTAMALGIYTARTGTGPAFLTQPSPPPNTTFPCRNLGVAGRYIEARLGKPPLLRETSRPTSFETVRNPVPTIKRAFGMHKVEDALSGVVLEKSLETRLSRVAQSTFNTKRNNAPFQHLLLYGPPGAGKTLFAKGLARHSGLEYAIMTGGDIAPLGRDAVTEMQKVFDCAQASRKGLSL 621
            IK AG T+ +G+  F+ DK+++ A  ATLTA+ALGIYTA+  T                      VAGRYIEAR+GKP L+RETSR ++ + V NP+P+IKRA  + K  DAL GVVLE  L  RL  VA STF+TK N APF+HLLL+GPPG GKTLFAK LARHSGLEYAI+TGGD+APLGR  VTE+ K+FD A  SR+GL L
Sbjct:  224 IKLAGNTVGSGIMTFVDDKEKLTATVATLTALALGIYTAKVSTN---------------------VAGRYIEARMGKPSLVRETSRRSAVQVVANPIPSIKRALRLQKATDALEGVVLEPKLNERLRSVALSTFHTKANRAPFRHLLLHGPPGTGKTLFAKALARHSGLEYAILTGGDVAPLGRAGVTEIHKLFDWASQSRRGLLL 408          
BLAST of mRNA_L-elsbetiae_contig6823.15582.1 vs. uniprot
Match: A0A024GA98_9STRA (AAA domain-containing protein n=2 Tax=Albugo TaxID=65356 RepID=A0A024GA98_9STRA)

HSP 1 Score: 222 bits (566), Expect = 5.610e-63
Identity = 116/207 (56.04%), Postives = 147/207 (71.01%), Query Frame = 1
Query:    1 GIKPAGGTLAAGMQEFLSDKDQMVAATATLTAMALGIYTARTGTGPAFLTQPSPPPNTTFPCRNLGVAGRYIEARLGKPPLLRETSRPTSFETVRNPVPTIKRAFGMHKVEDALSGVVLEKSLETRLSRVAQSTFNTKRNNAPFQHLLLYGPPGAGKTLFAKGLARHSGLEYAIMTGGDIAPLGRDAVTEMQKVFDCAQASRKGLSL 621
            GI+ AG TL  G+  F SDK+++ +A  + TA+ALGIYTA+  TG                     VAGRY+EARLGKP L+RETSR ++ +++ NPVP+IKR   + K+ D L GVVLE  L+ RL +VA ST NTK+N APF+HLLL+GPPG GKTLFAK LARHSGL+YAI+TGGD+APLGR+ VTE+ K+FD A  SR+GL L
Sbjct:  222 GIQVAGSTLGTGLMAFFSDKEKLTSAVVSFTALALGIYTAKVTTG---------------------VAGRYVEARLGKPSLVRETSRRSTAQSIINPVPSIKRLLNLEKIGDPLDGVVLEHKLDQRLRQVAVSTSNTKKNGAPFRHLLLHGPPGTGKTLFAKALARHSGLDYAILTGGDVAPLGREGVTEIHKLFDWASHSRRGLLL 407          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6823.15582.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5LJ37_9PHAE1.660e-9786.34AAA domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A835YR91_9STRA1.190e-7868.12AAA domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A7S2D4S5_9STRA8.860e-6861.35Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S2Y4I1_9STRA3.690e-6565.17Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2WW12_9STRA1.940e-6462.64Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A7S2ME04_9STRA2.240e-6460.39Hypothetical protein n=2 Tax=Dictyocha speculum Ta... [more]
A0A4D9D134_9STRA1.830e-6357.49AAA domain-containing protein n=3 Tax=Monodopsidac... [more]
A0A2D4BKB9_PYTIN2.490e-6357.49ATPase family AAA domain-containing protein 3A n=2... [more]
A0A0P1A5E7_PLAHL2.810e-6357.77Atpase family aaa domain-containing protein 3 n=1 ... [more]
A0A024GA98_9STRA5.610e-6356.04AAA domain-containing protein n=2 Tax=Albugo TaxID... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6823contigL-elsbetiae_contig6823:361..6751 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score295.0
Seed ortholog evalue5.2e-77
Seed eggNOG ortholog2880.D8LFV8
Preferred nameATAD3A
KEGG koko:K17681
Hectar predicted targeting categoryother localisation
GOsGO:0001558,GO:0001775,GO:0002252,GO:0002263,GO:0002274,GO:0002275,GO:0002283,GO:0002366,GO:0002376,GO:0002443,GO:0002444,GO:0002446,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005886,GO:0006810,GO:0006887,GO:0006955,GO:0006996,GO:0007005,GO:0008150,GO:0009987,GO:0010941,GO:0012505,GO:0012506,GO:0016020,GO:0016043,GO:0016192,GO:0030141,GO:0030659,GO:0030667,GO:0031090,GO:0031410,GO:0031982,GO:0032940,GO:0036230,GO:0040008,GO:0042119,GO:0042981,GO:0043066,GO:0043067,GO:0043069,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043299,GO:0043312,GO:0044422,GO:0044424,GO:0044433,GO:0044444,GO:0044446,GO:0044464,GO:0045055,GO:0045321,GO:0046903,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051179,GO:0051234,GO:0060548,GO:0065007,GO:0070820,GO:0071840,GO:0071944,GO:0097708,GO:0098588,GO:0098805,GO:0099503,GO:0101002,GO:0101003
EggNOG free text desc.mitochondrion organization
EggNOG OGsCOG1223@1,KOG0742@2759
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03029
Exons8
Model size1274
Cds size1227
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6823.15582.1prot_L-elsbetiae_contig6823.15582.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig6823 372..6715 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816755.9282506-UTR-L-elsbetiae_contig6823:360..3711622816755.9282506-UTR-L-elsbetiae_contig6823:360..371Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6823 361..371 -
1691683789.4533768-UTR-L-elsbetiae_contig6823:360..3711691683789.4533768-UTR-L-elsbetiae_contig6823:360..371Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6823 361..371 -
1622816756.0326114-UTR-L-elsbetiae_contig6823:6715..67511622816756.0326114-UTR-L-elsbetiae_contig6823:6715..6751Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6823 6716..6751 -
1691683789.5871377-UTR-L-elsbetiae_contig6823:6715..67511691683789.5871377-UTR-L-elsbetiae_contig6823:6715..6751Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6823 6716..6751 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816755.9390273-CDS-L-elsbetiae_contig6823:371..5651622816755.9390273-CDS-L-elsbetiae_contig6823:371..565Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6823 372..565 -
1691683789.4688435-CDS-L-elsbetiae_contig6823:371..5651691683789.4688435-CDS-L-elsbetiae_contig6823:371..565Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6823 372..565 -
1622816755.9498994-CDS-L-elsbetiae_contig6823:1155..12991622816755.9498994-CDS-L-elsbetiae_contig6823:1155..1299Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6823 1156..1299 -
1691683789.4809177-CDS-L-elsbetiae_contig6823:1155..12991691683789.4809177-CDS-L-elsbetiae_contig6823:1155..1299Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6823 1156..1299 -
1622816755.960317-CDS-L-elsbetiae_contig6823:2185..23801622816755.960317-CDS-L-elsbetiae_contig6823:2185..2380Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6823 2186..2380 -
1691683789.4913547-CDS-L-elsbetiae_contig6823:2185..23801691683789.4913547-CDS-L-elsbetiae_contig6823:2185..2380Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6823 2186..2380 -
1622816755.9703882-CDS-L-elsbetiae_contig6823:2925..30581622816755.9703882-CDS-L-elsbetiae_contig6823:2925..3058Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6823 2926..3058 -
1691683789.509605-CDS-L-elsbetiae_contig6823:2925..30581691683789.509605-CDS-L-elsbetiae_contig6823:2925..3058Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6823 2926..3058 -
1622816755.9826596-CDS-L-elsbetiae_contig6823:3521..36671622816755.9826596-CDS-L-elsbetiae_contig6823:3521..3667Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6823 3522..3667 -
1691683789.524764-CDS-L-elsbetiae_contig6823:3521..36671691683789.524764-CDS-L-elsbetiae_contig6823:3521..3667Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6823 3522..3667 -
1622816755.9951348-CDS-L-elsbetiae_contig6823:5004..51281622816755.9951348-CDS-L-elsbetiae_contig6823:5004..5128Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6823 5005..5128 -
1691683789.5412815-CDS-L-elsbetiae_contig6823:5004..51281691683789.5412815-CDS-L-elsbetiae_contig6823:5004..5128Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6823 5005..5128 -
1622816756.0058787-CDS-L-elsbetiae_contig6823:5782..59761622816756.0058787-CDS-L-elsbetiae_contig6823:5782..5976Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6823 5783..5976 -
1691683789.5536377-CDS-L-elsbetiae_contig6823:5782..59761691683789.5536377-CDS-L-elsbetiae_contig6823:5782..5976Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6823 5783..5976 -
1622816756.0185142-CDS-L-elsbetiae_contig6823:6618..67151622816756.0185142-CDS-L-elsbetiae_contig6823:6618..6715Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6823 6619..6715 -
1691683789.5681968-CDS-L-elsbetiae_contig6823:6618..67151691683789.5681968-CDS-L-elsbetiae_contig6823:6618..6715Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6823 6619..6715 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig6823.15582.1

>prot_L-elsbetiae_contig6823.15582.1 ID=prot_L-elsbetiae_contig6823.15582.1|Name=mRNA_L-elsbetiae_contig6823.15582.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=409bp
MQEFLSDKDQMVAATATLTAMALGIYTARTGTGPAFLTQPSPPPNTTFPC
RNLGVAGRYIEARLGKPPLLRETSRPTSFETVRNPVPTIKRAFGMHKVED
ALSGVVLEKSLETRLSRVAQSTFNTKRNNAPFQHLLLYGPPGAGKTLFAK
GLARHSGLEYAIMTGGDIAPLGRDAVTEMQKVFDCAQASRKGLSLVRRRG
GRVPKAAQHGDHQRGPPQRPERLPLPHGRVHGQVYAGVRVESAGAVRLGG
KRPDRRDGALRPPRPRRAAAHGELLHEDLPPGPSRQGQDHHDGRGGALSP
AGSGGPDGGLIGARDRQACHRVAGGGVRHERLLLHGRAHDGGFGCAPAAE
ETEAGVARGGADQLGGLIMPTPHAERMTPRLIRTLTQDAEEGVVGGSGEA
SGKPRGTS*
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mRNA from alignment at L-elsbetiae_contig6823:361..6751-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig6823.15582.1 ID=mRNA_L-elsbetiae_contig6823.15582.1|Name=mRNA_L-elsbetiae_contig6823.15582.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=6391bp|location=Sequence derived from alignment at L-elsbetiae_contig6823:361..6751- (Laminarionema elsbetiae ELsaHSoW15)
GGGATCAAGCCGGCGGGGGGCACGCTCGCCGCGGGTATGCAGGAGTTCCT GAGCGATAAGGATCAGATGGTGGCGGCGACGGCCACCCTGACGGCCATGG CCCTGGGGATCTACACCGCGAGAACGGGGACAGGTATGGAGGTTAGTTGT TGTTGCTGCTGCTGCTGCTGCTGCTGTTGGGGCTGCCGTCTTGATCGTTG TTGTCGTTGTTGGTGGTGATTTTGTCGTTGCTTGTGGTGGTGGTGATGTT GATGTTGGTGTTGTCTTCTGGTTGTTTTGGTGGCGTGACTGTTGTTGGTT TGGTTGTTGCCGTCGGATGGTAGTCAAACACGCAGGTGTCGATGTTGATA TTGCTGTTGCTGCCTTTGCTGTTATTTGTGCCGGTGGTGGTATTGGCAGT GTCTCTTGGTGGTGTTGGTGGCGTAATTGTTGTTGCTTGGTTTGCTGCGG TCGGATGGTCATCATCGAGCCCGAGGTACAGATGGCTCCACGACTTGTTG TTGTTCGTTGTTGTACATACGGGCCTTGGTTTTTGACCAGAGGCTTGGTG TTCATTTTTCAGTCGGTGCATCTTTACCTAGGTTTTGGGGCACAGGTGCT CATCCGGGCATCTAAAAAAGTGATCTCCGAGTTCTTAACAATTCACCGTG TTCTTGAGTGGTGGCACCATCTGTATGTATGAAGCCTGTCACAAGAAGAC TTATCCGTTAATCTGCTGTTGTTTCGTTTGGATAATAGGGAGGTAGAGTT AGCTGGCCCTTAACAAAACAACAAGGTCCCGCTTTTCTGACTCAACCGTC CCCGCCCCCCAACACTACTTTTCCGTGTCGAAACCTGGGTGTGGCCGGGC GATACATCGAGGCCAGGCTTGGCAAGCCGCCACTCTTGCGAGAAACTTCC AGGCCAACGTCCTTCGAGACGGTCCGCAACCCGGTTCCCACCATCAAGCG CGCCTTTGGCATGCATAAGGTGTGTTTTATTGCTCACTTATCGCTCAAGG GAGGCAGAGGGAGAAAGTAAGTCAGTGGGAGGGAGGGAAAGTGCGGAGCA GGGAGACACAGAAGTAGAGAGAGAGAGGAATAGCGGCAGAGACAGACGCA GAACCAGGAGCAGAGCGAGAGAGAATTACAGAGAGAGAGAGAGACAGAGA GAGAGAGAGAGTAAACACGAGAGAGTTAAGGTGCACACAATATCCACTGA GCTGTTAAGCAGCCAGCGCTGGTTGGAGGGACTACAAACCTCGGGTGAAA TCGGAGTGTAACAGCCTTACTAGCTGTCGGACCCCGGTTTCATTTTTGTC AAGGTTTATACAACGATATCCACGAGCTATTTTAAGCGATGATTGTCTGG CTCAGTGGATATCGTGCGAGCCACGCGTGTACCACCAAAGACCCGTACGA CGATGGATCCAAGCACGTCAGGCGGAAGACGGCATCAATCAAGTCAAGAT GCCCGACACCCAAAGTTGAGATCATACATACATATATTCATACGTGTTCG TCAATCGTGTCCGCAAATCAAGTACATAGATGCATAAAGAGTAGACCGAC CAACTGTTAAAGAACGCAGAGAGACGCTCTAGAGTAAACCAAACCTTATG TAAAATACGGATACGTAACGCAGGTGGAAGACGCTCTCAGCGGCGTGGTG CTAGAGAAGAGCCTGGAGACCAGGCTTTCGAGGGTTGCGCAGTCGACGTT CAACACCAAGCGGAATAACGCCCCCTTCCAACACCTGCTCCTGTATGGTA AGCTGCGGCTAGCACCGCTGAGATACCTCTTCCGGTATTAAATAGCCAGT GTGTACATCTTTTGGCGTTCGGTGCTTGTGCTGTGTAAGAAGTATCGACG TTGGCGGTGTTTTATTTATTTACTGGCTGTGCGTTGGTATGGGGACTACT GCTGTGTAAGTGGTTTCAAGCGGTGGTCCGCTCGTGAGTGTTTTTGCCTC GATTTGCTGGGTCTGGTATTTTTGCGCCCTCGACTTTCCAACTCCCAAGC AGAAGAGCGCTTGTGTCGAACACCTCTCGCTTCGAGTTTGGTGACGCTGT TTACTGCTGCTGTGTTAGGCTACCGTAGGTGACACAAGATACCACCCCCC CGGACATATTTTAAAAGTTGGATTCCTCTCCAGCAAGAAGAGTGCCAGTG CCGAAAGGGGGTGGCGTTGGAAAGGTCTGTTCGAAAATGTATCGTTTGGT GCTGGCACCCTCTTCGATACAGAGTAATCGGGGTTTTAAAATCTGTCCTG GGGGTGTGGTATATTGTGTCACCTACGGTATAGTGGTGAGGATGATGCTG GGGCCGCTTGTTTATGAAAACGTTTACCTTCTGGAATAGAGGGGCCGATA GTCGAGTTTAGTGGTTCGATCTACAGCTGCTGTGTGCAGCTAAAATAGTG ACGGTGATGCTGGGGTCGCTTGTTTGCGAAAATATAGTCTTGCATAGAAT ATGTAGAGGAACGCCGATAGCATAGGCCTTGTTTAGCACTTAAGTCCGCC TTGGTTGTTATCCTTGCTCCCTGCCCAGTTTCTTCTTTCTGTCACTGCTG CAGCTTCGGCCACCCGATGTTTCGAAACCATTTTTGCTTTCGCTGTCCGA TGATGGCGGAGTTTTCCGAGTTGGCCAGCATGAAAGTCGAACGCCGACGG TATCAACAACCAACCCAAAGCAGCAGTATCAGCAGTGCCAGTATTTACTG CATTACCTGATGGGCTTGTTACCCAAGCAGCAGAACCAGTAGTGTCAGTG TACTCACCTCAAAATACATGTACTCTTATGAAGAGTTGTTTTCTCGCCCC GTGTACTTTTTTGGCATCGGGGTGACAAACCCTCTAACCACGCGCTAAAC AAAGGTGGGTCTCTCCCCGGGGTATCTGCTGGTTGGCCTGTCAGAGTTGT GCAGGGGAAGTTTTGGATTTTTCTGTTACATAACATGTTGGGTGTTTTTG TTCTCGGCGGGACCAATACCTCTTCACTACGATATTACTGCTCTATTGGA CCGTTAATTCACCACGGAGCTCCGTCTCTAATGTGAGGAGATTCTTCTTG CGATTTCCTGATTTCTTGAAAAAAAAAAACACAGGACCGCCGGGGGCCGG TAAGACGCTCTTCGCCAAGGGCCTGGCACGCCACTCGGGCCTGGAGTACG CCATCATGACTGGCGGCGACATCGCGCCCCTTGGGAGGGACGCCGTGACG GAGATGCAGAAGGTCTTCGACTGCGCTCAGGTATTGCTCTATCTATGTAC AGAGGCTCCGTTTTGTTTTTTGCCGTTTCCCCGTGGAATGTATGTGTAGT CCGTGGATGTAGCGTATCATTTTCTCTTTTGCTGCTTTTGCCCGTGAAAT GTATGTAAATTATGAAGCGTAATACGTTTTGTTTGTTTTGCGCTAAAATA TGCGAATACCACGAGCAGAAAACATTGTATGTGGCGCTTAAAAGTGCGTT CCGTATCCCACGCTTTGGCAGTCTCACTTCTACCACTCATTTCCCCTACC TTGATTTCCCTCTTAAGTTTTTTTTTTGTGTGTTGACGGTGTGCATATAT ACATACATATAGGCATGAACCGAAGACGGAGTGTGTTTTGGGTTATATTG TACTGAGAACTGAAGAGATTGATATTTAATCGTTTGTGCCTGCCTGCCCG TGCCCGTGCCCGTCTGTCCGTCTATCTGCCCGTCTATCTGTAGGCGAGCC GCAAGGGCCTTTCTCTTGTTCGTCGACGAGGCGGACGCGTTCCTAAGGCG GCGCAACACGGAGACCATCAGCGAGGACCTCCTCAACGCCCTGAACGCCT TCCTCTACCGCACGGGAGAGTCCACGGTGAGAGCTACATACGGCAGTTCG CTCCTCCCATCGCATCACATCACAGCGTGCATGAAACGCGAAAAAAAGAC ATTCGAGACGCCCTTGTATCACTGCTGTATCGTGGTGGTGAAGCTGTGGT GGTTGGAGAGTCTGCGTATAGTTTTGGTCCGTTGTACACCTGCATCACGT TACGGTTGCGGTGGAAGGAAGTCCATGTCCGGCTAGGAAGCCAGTAGTGA TAATAGACAGTCATGTATGTCACTGGACTGTCGGGCGAACATTCACGCGT ATGTCCATGTTCAGGGTGCCGAAAAACGGCTTCATCTTCTTCTTGCTCTC GGTTGCCGTCCTTCTTATTGTCTCTCTCACCCCTCTTCGCCCTCCCCACG TCCACATTCCTGTCTTGCGTCAGATGTGCCCATTTTGCCGTCAACGCAGC ACGTAATGCTTACGTTTATTCGTCCGTGCCGCTTTGTCTCGTTTGTCTCG TTTCCTCTTTCTTGTGGGGTGTGCTGCACAAACGCCATGTGATTCCATAC ATACACCGCAAACGCGCACAGGACAAGTTTATGCTGGTGTACGCGTCGAA TCAGCCGGAGCAGTTCGACTGGGCGGTAAACGACCGGATCGACGAGATGG TGCCCTTCGGCCTCCTCGGCCGCGAAGAGCGGCTGCGCATGGTGAACTTC TACATGAAGATCTACCTCCTGGACCCTCCCGGCAGGGCCAAGATCATCAC GATGGACGGGGTGGCGGTGAGAAATAGGAAACCAAGCGTCACGCACGCAC GCGCACGCGTTCAGCGGATGTGGACTGATCGTGACTTAATGCTTCGTGTG ATGTGTATTTATGTAAACATATACTTCGAAGTAGCGTACGAGTTTGCAGT TTTCCGCGGGCATTATGTATGTTGGCGTTCGATTTTTTGACGTCATATAT ATGGAAAGGATTGTTTGGACATCATTCTTGTATGAATCGAGACATCAGGA ATTGCGTGTGGAGGAGGTGTGTTGAGGAGACCTATCCAACGATCTCAAAT CTTCGTGGAGCCCCTCCAAAGTGAGCACTTGGCGCCTGCTTCATGGGGAG ATTGGCTGTCGCCGTTGCCTACTTTTCAGCGCACGCCTGCCAGAAGGATG GCGCTTTACAATACTCGGATGAAGTCCGATCGAGAATCACAGAGCGGGGG GGGAAGGGGGGGGTGGGGTTGAACGGTTCCGGCGAACAGAACCCACACAA GTGCGTTTTCGTCTGGAGGCGCTTGGTTTGCCATCCTATCCTGTGCTGGA GCTCTCCTTTTACATTTTTCTCAGTGGATGTTGGATCACACGCGCGCATG TAAATAGCACCATCGGCGCGGCACACGCAGATTTCGGTATTTTACTCGCG ACCCTCCTGTTGCTGCGGTCGTACACCATACCAGCCGAGAGATCGGTGTA TTTGCTGCCACAGGTCTGTCTCCGTGTTTGCGAATACTCAGATTTCGATC ACGCGCACGCGCGCTGTGTCTCTCTGTGTGTTTTGTGCTTTTATATTTTT GGCCTTTGATGTTTTGGCATCCGCCGTGCGTGTTGTCGATTCTCCGCTGC CCGATGTATGTACCCCTCGGTTCGTCTCTCCATCTGCCGTGCCGCCCCAC AGCACTCTCACCTGCAGGAAGTGGCGGACCTGACGGAGGGCTTATCGGGG CGAGAGATCGCCAAGCTTGCCATCGCGTGGCAGGCGGCGGCGTACGGCAC GAGCGACTCCTCCTTCACGGCCGAGCTCATGACGGAGGTTTTGGATGTGC GTCTACTATTTGCGTACTTCCGAAGTACATGTGTGTGTGTGTACATACCT ACCGTGCACGACACAAGATAACGCAGCCCCTGGACCGATTTTCAAAGCTC GTTTACTCCGCAACGAGTTACTATTCTCATACCAAACGACGCGTTTGCGG ACAGCTCTTGATGAGATCTTCCCAACGCCGCCCTTTTCGGGACTGATGGC ACTCTTCTCGCTGTTGCCTTTGTGCTATAAATATGTAGTAGCATATATTC CCACTTGGTCAACTATTTTCAGTTGGCAAGACGCCGACCGCGCTGATAGG CTGACCAGCGACAGCATGGCTGCGGATCGACGGCCGGTCCTCTGTGGCTT TGTGGTTGTGGGAGTAGGTGAAACAGACGGTGGAGACTATGGAGAGGGTC AGAACTGTGCCACGTGGTCCCCCCGTGGAGTTTTCCACGCGTCCGAAATC GTGATTTATACATGCATACGTAGAGCAGCTACCGGGATTTCTCGCGCGAT TGGGTCTACCACTTTCCCTTGTTTTCCCCTTGCCCCTCTTACCCCCGTGC CAACCGCCGTGTACCTACCGTCGCTGCTCGATCCAGGCGCACCTGCAGCA GAAGAGACAGAAGCAGGCGTGGCTCGAGGGGGCGCAGACCAGCTCGGGGG GTTGATTATGCCCACCCCCCACGCTGAGCGAATGACCCCGCGGCTGATTC GAACGCTCACGCAGGACGCAGAAGAGGGCGTCGTAGGCGGGTCAGGGGAG GCGTCGGGGAAGCCCCGTGGGACTAGCTAAGTACAGGGTAG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig6823:361..6751-

>mRNA_L-elsbetiae_contig6823.15582.1 ID=mRNA_L-elsbetiae_contig6823.15582.1|Name=mRNA_L-elsbetiae_contig6823.15582.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2454bp|location=Sequence derived from alignment at L-elsbetiae_contig6823:361..6751- (Laminarionema elsbetiae ELsaHSoW15)
ATGCAGGAGTTCCTGAGCGATAAGGATCAGATGGTGGCGGCGACGGCCAC
CCTGACGGCCATGGCCCTGGGGATCTACACCGCGAGAACGGGGACAGATG
CAGGAGTTCCTGAGCGATAAGGATCAGATGGTGGCGGCGACGGCCACCCT
GACGGCCATGGCCCTGGGGATCTACACCGCGAGAACGGGGACAGGTCCCG
CTTTTCTGACTCAACCGTCCCCGCCCCCCAACACTACTTTTCCGTGTCGA
AACCTGGGTGTGGCCGGGCGATACATCGAGGCCAGGCTTGGCAAGCCGCC
ACTCTTGCGAGAAACTTCCAGGCCAACGTCCTTCGAGACGGTCCGCAACC
CGGTTCCCACCATCAAGCGCGCCTTTGGCATGCATAAGGTCCCGCTTTTC
TGACTCAACCGTCCCCGCCCCCCAACACTACTTTTCCGTGTCGAAACCTG
GGTGTGGCCGGGCGATACATCGAGGCCAGGCTTGGCAAGCCGCCACTCTT
GCGAGAAACTTCCAGGCCAACGTCCTTCGAGACGGTCCGCAACCCGGTTC
CCACCATCAAGCGCGCCTTTGGCATGCATAAGGTGGAAGACGCTCTCAGC
GGCGTGGTGCTAGAGAAGAGCCTGGAGACCAGGCTTTCGAGGGTTGCGCA
GTCGACGTTCAACACCAAGCGGAATAACGCCCCCTTCCAACACCTGCTCC
TGTATGGTGGAAGACGCTCTCAGCGGCGTGGTGCTAGAGAAGAGCCTGGA
GACCAGGCTTTCGAGGGTTGCGCAGTCGACGTTCAACACCAAGCGGAATA
ACGCCCCCTTCCAACACCTGCTCCTGTATGGACCGCCGGGGGCCGGTAAG
ACGCTCTTCGCCAAGGGCCTGGCACGCCACTCGGGCCTGGAGTACGCCAT
CATGACTGGCGGCGACATCGCGCCCCTTGGGAGGGACGCCGTGACGGAGA
TGCAGAAGGTCTTCGACTGCGCTCAGGACCGCCGGGGGCCGGTAAGACGC
TCTTCGCCAAGGGCCTGGCACGCCACTCGGGCCTGGAGTACGCCATCATG
ACTGGCGGCGACATCGCGCCCCTTGGGAGGGACGCCGTGACGGAGATGCA
GAAGGTCTTCGACTGCGCTCAGGCGAGCCGCAAGGGCCTTTCTCTTGTTC
GTCGACGAGGCGGACGCGTTCCTAAGGCGGCGCAACACGGAGACCATCAG
CGAGGACCTCCTCAACGCCCTGAACGCCTTCCTCTACCGCACGGGAGAGT
CCACGGCGAGCCGCAAGGGCCTTTCTCTTGTTCGTCGACGAGGCGGACGC
GTTCCTAAGGCGGCGCAACACGGAGACCATCAGCGAGGACCTCCTCAACG
CCCTGAACGCCTTCCTCTACCGCACGGGAGAGTCCACGGACAAGTTTATG
CTGGTGTACGCGTCGAATCAGCCGGAGCAGTTCGACTGGGCGGTAAACGA
CCGGATCGACGAGATGGTGCCCTTCGGCCTCCTCGGCCGCGAAGAGCGGC
TGCGCATGGTGAACTTCTACATGAAGATCTACCTCCTGGACCCTCCCGGC
AGGGCCAAGATCATCACGATGGACGGGGTGGCGGACAAGTTTATGCTGGT
GTACGCGTCGAATCAGCCGGAGCAGTTCGACTGGGCGGTAAACGACCGGA
TCGACGAGATGGTGCCCTTCGGCCTCCTCGGCCGCGAAGAGCGGCTGCGC
ATGGTGAACTTCTACATGAAGATCTACCTCCTGGACCCTCCCGGCAGGGC
CAAGATCATCACGATGGACGGGGTGGCGCACTCTCACCTGCAGGAAGTGG
CGGACCTGACGGAGGGCTTATCGGGGCGAGAGATCGCCAAGCTTGCCATC
GCGTGGCAGGCGGCGGCGTACGGCACGAGCGACTCCTCCTTCACGGCCGA
GCTCATGACGGAGGTTTTGGATCACTCTCACCTGCAGGAAGTGGCGGACC
TGACGGAGGGCTTATCGGGGCGAGAGATCGCCAAGCTTGCCATCGCGTGG
CAGGCGGCGGCGTACGGCACGAGCGACTCCTCCTTCACGGCCGAGCTCAT
GACGGAGGTTTTGGATGCGCACCTGCAGCAGAAGAGACAGAAGCAGGCGT
GGCTCGAGGGGGCGCAGACCAGCTCGGGGGGTTGATTATGCCCACCCCCC
ACGCTGAGCGAATGACCCCGCGGCTGATTCGAACGCTCACGCAGGACGCA
GAAGAGGGCGTCGTAGGCGGGTCAGGGGAGGCGTCGGGGAAGCCCCGTGG
GACTAGCTAAGCGCACCTGCAGCAGAAGAGACAGAAGCAGGCGTGGCTCG
AGGGGGCGCAGACCAGCTCGGGGGGTTGATTATGCCCACCCCCCACGCTG
AGCGAATGACCCCGCGGCTGATTCGAACGCTCACGCAGGACGCAGAAGAG
GGCGTCGTAGGCGGGTCAGGGGAGGCGTCGGGGAAGCCCCGTGGGACTAG
CTAA
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