prot_L-elsbetiae_contig6817.15577.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig6817.15577.1
Unique Nameprot_L-elsbetiae_contig6817.15577.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length496
Homology
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BLAST of mRNA_L-elsbetiae_contig6817.15577.1 vs. uniprot
Match: A0A6H5JBU0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBU0_9PHAE)

HSP 1 Score: 233 bits (595), Expect = 1.760e-67
Identity = 202/481 (42.00%), Postives = 254/481 (52.81%), Query Frame = 0 
Query:    3 RTTLSTRPWVILIAQVLAQPYYCVLGVLETNQDGPGALDTNNKAAATAGKRVLPGKPPEPRAVEEDVIVAARHCVALDGSGYFPADHSLGLFEMDGARA--SRPRITTASVEF-VQQRHQEMGGAGVDHTVAAGTVGVRLLLDVDITDERKEKEGGEGSPLELHAAYNAGESIPTREEVEAAAAEAAAVT-NNAAEAQLAISALAAWNLISTNNSSIAQEGNAAGIEMRIEVAAAFGYGGDRYTFSESLALAQDDAYIGSNDAPLS-ASFDWQPTGAIWASLDGPAVADVKVYGVPSAAMTESVPMKQGETLLLHATLCKRASPGVVASTAP--VQVTLKQPYIEHNEFATKVEEEGIAVVASADASNXXXXXXXXXXXXXXXXXXXXXXXXEYGRGMEAVNALPRMPGWKPGDWKKXXXXXXXXXXXXXSRRTENTAYRQAGRRGVGSNSGTDSRDGLKRREQTSKRRRRTPGWGVVKEA 476
            RTT++     IL  QVLA+ + CV  +LE  +D     D  +  AATAG     G+  + RA E DV  AARHCVA+D  G FPA+H+LGLFE +  R     PR+T ASVEF    + Q  GG+  D T A GT+  +++L+VD T   +E  GG  S          GE +PT E +E  AA A A T  N AEAQ+AISALAAWNL++T      +E  A    +R+EV AAFGY GD YT S+++ L  D    G + A LS A+FDWQP   +W+ LD P  ADV+VYG  S    E    ++   LLL  TLCKRAS     ST     Q T+K     + E    V  E +A+  S  +                          E GRGM+AV+ALPR+P WKPGDWKKXXXXXXXXXXXXX          +A + G      T SRDG  RR    + +     WG VK A
Sbjct:    3 RTTIA-----ILFVQVLAR-FSCVATILEARRDALSPDDATSTVAATAGGT---GRVIQLRATESDVKAAARHCVAVDEVGRFPANHALGLFETEPGRLVLGTPRVTDASVEFSALPQRQNAGGSNSDETPATGTIVFKVVLEVDNTGRWREGGGGTTS------GRRTGEPVPTGEGMEMTAAAATAATAENPAEAQMAISALAAWNLMTT------RETPAMLPMIRVEVGAAFGYHGDWYTASKTIPLTSDGT--GHSSALLSSATFDWQPAPDVWSKLDEPMAADVRVYGTASTPTEE----QEAGLLLLRGTLCKRASGFGGRSTRDETTQGTMKAALTPYAERLPAVAAEAVAISPSRPS--------VVVSEIRDEEWWRAREEEESGRGMDAVDALPRLPRWKPGDWKKXXXXXXXXXXXXXXXXXXXXXXXRADKWGGDRGRDTASRDGRNRRGGGREAKVGRSPWGAVKGA 448
[Close]
BLAST of mRNA_L-elsbetiae_contig6817.15577.1 vs. uniprot
Match: D8LGJ6_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGJ6_ECTSI)

HSP 1 Score: 61.6 bits (148), Expect = 2.370e-8
Identity = 39/88 (44.32%), Postives = 51/88 (57.95%), Query Frame = 0 
Query:   13 ILIAQVLAQPYYCVLGVLETNQDGPGALDTNNKAAATAGKRVLPGKPPEPRAVEEDVIVAARHCVALDGSGYFPADHSLGLFEMDGAR 100
            ++  QVLA+ + CV  V E  +D     D  +  AATAG     G+  + RA E DV   ARHCVA+D  G FPA+H+LGLFE +  R
Sbjct:    8 VVFVQVLAR-FSCVATV-EARRDALSPDDATSTTAATAGGT---GRVIQLRATESDVKAVARHCVAVDEDGRFPANHALGLFETEPGR 90
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6817.15577.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JBU0_9PHAE1.760e-6742.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LGJ6_ECTSI2.370e-844.32Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 178..198
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..495
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..20
score: 0.639

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6817contigL-elsbetiae_contig6817:6724..8776 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6817.15577.1mRNA_L-elsbetiae_contig6817.15577.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig6817 6654..9228 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig6817.15577.1 ID=prot_L-elsbetiae_contig6817.15577.1|Name=mRNA_L-elsbetiae_contig6817.15577.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=496bp
MVRTTLSTRPWVILIAQVLAQPYYCVLGVLETNQDGPGALDTNNKAAATA
GKRVLPGKPPEPRAVEEDVIVAARHCVALDGSGYFPADHSLGLFEMDGAR
ASRPRITTASVEFVQQRHQEMGGAGVDHTVAAGTVGVRLLLDVDITDERK
EKEGGEGSPLELHAAYNAGESIPTREEVEAAAAEAAAVTNNAAEAQLAIS
ALAAWNLISTNNSSIAQEGNAAGIEMRIEVAAAFGYGGDRYTFSESLALA
QDDAYIGSNDAPLSASFDWQPTGAIWASLDGPAVADVKVYGVPSAAMTES
VPMKQGETLLLHATLCKRASPGVVASTAPVQVTLKQPYIEHNEFATKVEE
EGIAVVASADASNSSSRPPIVVSEIEDEEWWKSREEEEYGRGMEAVNALP
RMPGWKPGDWKKRRRRRRRQQEEKESRRTENTAYRQAGRRGVGSNSGTDS
RDGLKRREQTSKRRRRTPGWGVVKEAWKAFGRMIRGAKGKLRRKK*
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