mRNA_L-elsbetiae_contig681.15574.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig681.15574.1 vs. uniprot
Match: A0A6H5L355_9PHAE (PPM-type phosphatase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L355_9PHAE) HSP 1 Score: 181 bits (458), Expect = 9.930e-57 Identity = 90/92 (97.83%), Postives = 91/92 (98.91%), Query Frame = 2 Query: 35 MEERETAYAQLITAEPEFLVSEITPQDEFLVLACDGVFDVLTSEEVVANVYEKMKIHADAQRCCEDLTEMAIVEKRTRDNVSLVLLVFNKWF 310 MEERETAYAQLITAEPEFLVSEITPQDEFLVLACDGVFDVLTSEEVVANVYEKMKIHADAQRCCEDLTE AIVE+RTRDNVSLVLLVFNKWF Sbjct: 1 MEERETAYAQLITAEPEFLVSEITPQDEFLVLACDGVFDVLTSEEVVANVYEKMKIHADAQRCCEDLTEKAIVERRTRDNVSLVLLVFNKWF 92
BLAST of mRNA_L-elsbetiae_contig681.15574.1 vs. uniprot
Match: D7FNP4_ECTSI (Putative serine/threonine phosphatase 2C ptc2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNP4_ECTSI) HSP 1 Score: 124 bits (312), Expect = 8.320e-32 Identity = 63/66 (95.45%), Postives = 63/66 (95.45%), Query Frame = 2 Query: 23 DGTTMEERETAYAQLITAEPEFLVSEITPQDEFLVLACDGVFDVLTSEEVVANVYEKMKIHADAQR 220 D MEERETAYAQLITAEPEFLVSEITPQDEFLVLACDGVFDVLTSEEVVANVYEKMKIHADAQR Sbjct: 268 DADAMEERETAYAQLITAEPEFLVSEITPQDEFLVLACDGVFDVLTSEEVVANVYEKMKIHADAQR 333
BLAST of mRNA_L-elsbetiae_contig681.15574.1 vs. uniprot
Match: A0A7S2V0C4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V0C4_9STRA) HSP 1 Score: 105 bits (261), Expect = 3.960e-26 Identity = 47/82 (57.32%), Postives = 68/82 (82.93%), Query Frame = 2 Query: 65 LITAEPEFLVSEITPQDEFLVLACDGVFDVLTSEEVVANVYEKMKIHADAQRCCEDLTEMAIVEKRTRDNVSLVLLVFNKWF 310 L+TAEPE L+SE+TP+DEF++LACDG+FDVL +EEV+ + +MK H DAQR E L+ +AI ++RTRDNV++VL++ N+W+ Sbjct: 63 LVTAEPEILISELTPEDEFVLLACDGLFDVLGNEEVIDLIKTEMKQHGDAQRAVEMLSHVAIHKRRTRDNVTIVLVILNRWW 144
BLAST of mRNA_L-elsbetiae_contig681.15574.1 vs. uniprot
Match: A0A6H5KIH1_9PHAE (PPM-type phosphatase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KIH1_9PHAE) HSP 1 Score: 100 bits (248), Expect = 1.130e-21 Identity = 48/82 (58.54%), Postives = 64/82 (78.05%), Query Frame = 2 Query: 65 LITAEPEFLVSEITPQDEFLVLACDGVFDVLTSEEVVANVYEKMKIHADAQRCCEDLTEMAIVEKRTRDNVSLVLLVFNKWF 310 LITAEPE L ITP+DEF++LACDG+FDV TS+EVV V +++++H D QR CE L AI E+ T+DNVS+VL+V NK++ Sbjct: 1168 LITAEPEMLSCRITPEDEFVLLACDGLFDVFTSDEVVRIVRKELRMHGDTQRVCETLVRRAINERYTQDNVSVVLVVLNKFW 1249
BLAST of mRNA_L-elsbetiae_contig681.15574.1 vs. uniprot
Match: A0A836CBM8_9STRA (Phosphatase 2C-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBM8_9STRA) HSP 1 Score: 95.5 bits (236), Expect = 4.290e-20 Identity = 45/95 (47.37%), Postives = 67/95 (70.53%), Query Frame = 2 Query: 11 GPQNDGTTMEERETAYAQLITAEPEFLVSEITPQDEFLVLACDGVFDVLTSEEVVANVYEKMKIHADAQRCCEDLTEMAIVEKRTRDNVSLVLLV 295 GP DG ++ A L+ +EPEF V ++TP ++F+VLACDG+FDV ++ EVV V +M +H DAQ+CCE +T AI E+ TRDNV+++L++ Sbjct: 487 GPDADG--LDSTSGGCAPLVISEPEFTVVQLTPAEDFMVLACDGLFDVFSNVEVVQAVCAEMAVHGDAQKCCESITLRAIRERHTRDNVTMILVM 579
BLAST of mRNA_L-elsbetiae_contig681.15574.1 vs. uniprot
Match: A0A7S4DCC2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DCC2_HETAK) HSP 1 Score: 89.0 bits (219), Expect = 5.990e-19 Identity = 42/82 (51.22%), Postives = 61/82 (74.39%), Query Frame = 2 Query: 65 LITAEPEFLVSEITPQDEFLVLACDGVFDVLTSEEVVANVYEKMKIHADAQRCCEDLTEMAIVEKRTRDNVSLVLLVFNKWF 310 LIT EPE L ++TP+D F++LACDG+FDV +EE VA V ++M H +A R CE L+ A+ E+ +RDN+++VLLV N+W+ Sbjct: 151 LITCEPEILEYDLTPEDHFILLACDGLFDVFENEEAVALVLQEMAGHRNAHRACEALSRRAL-ERGSRDNITVVLLVLNEWW 231
BLAST of mRNA_L-elsbetiae_contig681.15574.1 vs. uniprot
Match: A0A7S0XEJ1_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0XEJ1_9STRA) HSP 1 Score: 91.3 bits (225), Expect = 1.280e-18 Identity = 39/82 (47.56%), Postives = 60/82 (73.17%), Query Frame = 2 Query: 65 LITAEPEFLVSEITPQDEFLVLACDGVFDVLTSEEVVANVYEKMKIHADAQRCCEDLTEMAIVEKRTRDNVSLVLLVFNKWF 310 LI A+P+ + I+ D+FL+LACDG+FDV T E++V V M+ H D+QRCC++LT AI ++ +RDNVS++L++ N W+ Sbjct: 534 LIVADPDIQATNISENDQFLLLACDGLFDVFTPEDIVTFVKSNMEEHHDSQRCCQNLTYEAIRKRNSRDNVSVILIILNPWY 615
BLAST of mRNA_L-elsbetiae_contig681.15574.1 vs. uniprot
Match: W7U755_9STRA (Protein phosphatase 1b2 53 kDa isoform n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U755_9STRA) HSP 1 Score: 90.5 bits (223), Expect = 2.550e-18 Identity = 42/86 (48.84%), Postives = 63/86 (73.26%), Query Frame = 2 Query: 56 YAQ-LITAEPEFLVSEITPQDEFLVLACDGVFDVLTSEEVVANVYEKMKIHADAQRCCEDLTEMAIVEKRTRDNVSLVLLVFNKWF 310 Y+Q L+ A PE L++E++ +D+F++LACDG+FDV + EV+ + E MK H DAQR CE+++ AI ++ DNVS+VLLV N W+ Sbjct: 918 YSQPLVIARPEILITELSERDDFVLLACDGLFDVFPNSEVIRFILEDMKQHHDAQRACENISYTAIHQRIAHDNVSIVLLVTNNWW 1003
BLAST of mRNA_L-elsbetiae_contig681.15574.1 vs. uniprot
Match: A0A7S1XX31_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XX31_9STRA) HSP 1 Score: 88.6 bits (218), Expect = 1.160e-17 Identity = 42/82 (51.22%), Postives = 58/82 (70.73%), Query Frame = 2 Query: 65 LITAEPEFLVSEITPQDEFLVLACDGVFDVLTSEEVVANVYEKMKIHADAQRCCEDLTEMAIVEKRTRDNVSLVLLVFNKWF 310 ++TAEPE ++ P+DEF+VLACDG+FDV T+EEVV V +M H DAQ+C E L+ AI E+ RDNV++VL++ F Sbjct: 669 ILTAEPEIQSLKLAPEDEFIVLACDGLFDVFTNEEVVQAVRAEMAQHQDAQQCVESLSRRAIHERNCRDNVTIVLIILKPKF 750
BLAST of mRNA_L-elsbetiae_contig681.15574.1 vs. uniprot
Match: A0A7S2DMW7_9DINO (Hypothetical protein n=1 Tax=Alexandrium andersonii TaxID=327968 RepID=A0A7S2DMW7_9DINO) HSP 1 Score: 77.8 bits (190), Expect = 3.930e-15 Identity = 37/84 (44.05%), Postives = 56/84 (66.67%), Query Frame = 2 Query: 65 LITAEPEFLVSEITPQDEFLVLACDGVFDVLTSEEVVANVYEKMKI----HADAQRCCEDLTEMAIVEKRTRDNVSLVLLVFNK 304 L+ AEPE V ++TPQDEFL +ACDG+FDV +S+E V +Y ++ D +R ED+ AI ++R+RDNV+ +L+ F + Sbjct: 89 LVIAEPEIRVEQLTPQDEFLFMACDGLFDVFSSQEAVDFIYARLAAMPQNEQDPKRAVEDIVHEAIHDRRSRDNVTALLVTFRR 172 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig681.15574.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig681.15574.1 >prot_L-elsbetiae_contig681.15574.1 ID=prot_L-elsbetiae_contig681.15574.1|Name=mRNA_L-elsbetiae_contig681.15574.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=93bp MEERETAYAQLITAEPEFLVSEITPQDEFLVLACDGVFDVLTSEEVVANVback to top mRNA from alignment at L-elsbetiae_contig681:24714..27715- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig681.15574.1 ID=mRNA_L-elsbetiae_contig681.15574.1|Name=mRNA_L-elsbetiae_contig681.15574.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3002bp|location=Sequence derived from alignment at L-elsbetiae_contig681:24714..27715- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig681:24714..27715- >mRNA_L-elsbetiae_contig681.15574.1 ID=mRNA_L-elsbetiae_contig681.15574.1|Name=mRNA_L-elsbetiae_contig681.15574.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=558bp|location=Sequence derived from alignment at L-elsbetiae_contig681:24714..27715- (Laminarionema elsbetiae ELsaHSoW15)back to top |