prot_L-elsbetiae_contig6807.15570.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig6807.15570.1
Unique Nameprot_L-elsbetiae_contig6807.15570.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length215
Homology
BLAST of mRNA_L-elsbetiae_contig6807.15570.1 vs. uniprot
Match: D7G1U0_ECTSI (Altered inheritance of mitochondria protein 24, mitochondrial n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1U0_ECTSI)

HSP 1 Score: 218 bits (554), Expect = 4.710e-66
Identity = 110/114 (96.49%), Postives = 112/114 (98.25%), Query Frame = 0
Query:   92 MASKVEGQESQMVTFELDPGQVIRAEAGNLVFMEDGIEMDTNTGGGASSMFRRVITGQNMFVTDYVNRGDRTSKVGLGTDVPSKIVRLPLAAYGGEVICQRGAFLAGSHTIDIQ 205
            MASKVEGQESQMVTFEL+PGQVIRAEAGNLVFMEDGIEMDTNTGGGASSMFRRVITGQNMFVTDYVNRGD + KVGLGTDVPSKIVRLPLAAYGGEVICQRGAFLAGSHTIDIQ
Sbjct:    1 MASKVEGQESQMVTFELEPGQVIRAEAGNLVFMEDGIEMDTNTGGGASSMFRRVITGQNMFVTDYVNRGDASGKVGLGTDVPSKIVRLPLAAYGGEVICQRGAFLAGSHTIDIQ 114          
BLAST of mRNA_L-elsbetiae_contig6807.15570.1 vs. uniprot
Match: A0A1Z5KFL0_FISSO (Altered inheritance of mitochondria protein 24, mitochondrial n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KFL0_FISSO)

HSP 1 Score: 152 bits (383), Expect = 1.510e-41
Identity = 67/123 (54.47%), Postives = 98/123 (79.67%), Query Frame = 0
Query:   84 LAKPLDFDMASKVEGQESQMVTFELDPGQVIRAEAGNLVFMEDGIEMDTNTGGGASSMFRRVITGQNMFVTDYVNRGDRTSKVGLGTDVPSKIVRLPLAAYGGEVICQRGAFLAGSHTIDIQV 206
            + +P+DFD+A+K+EG ESQ+VT EL P QV+RAE+G ++++ +G+EM+T TGGG S+ FRR++TGQN F++DY   G+   +V LGTD PSKI+RL +  YGG+++CQ+GA L  SHTID+Q+
Sbjct:   44 VGEPIDFDLAAKIEGNESQIVTIELRPNQVLRAESGAMMYLTEGVEMNTTTGGGLSAGFRRMMTGQNFFISDYTYTGNTVGRVALGTDFPSKILRLNVPEYGGKLVCQKGALLCASHTIDVQM 166          
BLAST of mRNA_L-elsbetiae_contig6807.15570.1 vs. uniprot
Match: A0A6U0KGL8_9STRA (Altered inheritance of mitochondria protein 24, mitochondrial (Fragment) n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A6U0KGL8_9STRA)

HSP 1 Score: 148 bits (373), Expect = 7.380e-41
Identity = 69/129 (53.49%), Postives = 99/129 (76.74%), Query Frame = 0
Query:   80 DHLALAKPLDFDMASKVEGQESQMVTFELDPGQVIRAEAGNLVFMEDGIEMDTNTGGGASSMFRRVITGQNMFVTDYVNRGD--RTSKVGLGTDVPSKIVRLPLAAYGGEVICQRGAFLAGSHTIDIQV 206
            D +    P+DFD+ASK+EG ESQ+VT  L+PGQV+RAE+G+++FM DGI M+T TGGG S+ F+R++TGQN+F++D+   G+   T  + LGTD PSKIVRL +  YGG+++ Q+GA L  SHT+DI++
Sbjct:   94 DGVVATHPIDFDVASKIEGNESQIVTVALEPGQVLRAESGSMMFMTDGITMETTTGGGMSAGFKRMLTGQNVFISDFRYEGEPATTGLIALGTDFPSKIVRLNIKQYGGKIVAQKGALLCASHTVDIEM 222          
BLAST of mRNA_L-elsbetiae_contig6807.15570.1 vs. uniprot
Match: A0A7S3L1B2_9STRA (Altered inheritance of mitochondria protein 24, mitochondrial n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L1B2_9STRA)

HSP 1 Score: 146 bits (368), Expect = 2.520e-40
Identity = 69/120 (57.50%), Postives = 95/120 (79.17%), Query Frame = 0
Query:   86 KPLDFDMASKVEGQESQMVTFELDPGQVIRAEAGNLVFMEDGIEMDTNTGGGASSMFRRVITGQNMFVTDYVNRGDR-TSKVGLGTDVPSKIVRLPLAAYGGEVICQRGAFLAGSHTIDI 204
            +P+DFD+ SK+EG ESQ+VT  L+PGQV+RAE+G +++M  G+EM+T TGGG SS F R++TGQN F++DY  +G+  T +V LGTD PSKI+RL +  YGG+++CQ+GA L  SHTIDI
Sbjct:   70 RPIDFDIQSKIEGNESQIVTITLEPGQVLRAESGAMMYMTAGVEMNTTTGGGLSSGFSRMLTGQNFFISDYSYQGETGTGQVALGTDFPSKILRLNVPEYGGKLVCQKGALLCASHTIDI 189          
BLAST of mRNA_L-elsbetiae_contig6807.15570.1 vs. uniprot
Match: A0A7S1VUA2_9STRA (Altered inheritance of mitochondria protein 24, mitochondrial n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VUA2_9STRA)

HSP 1 Score: 150 bits (379), Expect = 2.900e-40
Identity = 78/156 (50.00%), Postives = 113/156 (72.44%), Query Frame = 0
Query:   52 RRSRSKPKPSSGSDITAGGSNAPAVADPDHLALAKPLDFDMASKVEGQESQMVTFELDPGQVIRAEAGNLVFMEDGIEMDTNTGGGASSMFRRVITGQNMFVTDYV-NRGDRTSKVGLGTDVPSKIVRLPLAAYGGEVICQRGAFLAGSHTIDIQV 206
            RR  S    ++ + +T    +A A+   D ++  +P++FD+A+K+EG ESQ+VT  L+P QV+RAE+G ++FM DG+EM+T TGGG S+ F+R++TGQN F++DYV NR     +V LGTD PSKIVRL +A YGG++ CQ+GA L  SHTIDI++
Sbjct:   85 RRYYSNSPTNNSNSLTPQAQDAGALTSSDGVS-GRPINFDVAAKIEGNESQIVTVTLEPNQVLRAESGAMMFMTDGVEMNTTTGGGLSTGFQRMLTGQNFFISDYVYNRPTGKGQVALGTDFPSKIVRLNVAEYGGKITCQKGALLCASHTIDIEM 239          
BLAST of mRNA_L-elsbetiae_contig6807.15570.1 vs. uniprot
Match: A0A7S4QQK5_9STRA (Altered inheritance of mitochondria protein 24, mitochondrial n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QQK5_9STRA)

HSP 1 Score: 147 bits (372), Expect = 1.000e-39
Identity = 69/129 (53.49%), Postives = 101/129 (78.29%), Query Frame = 0
Query:   80 DHLALAKPLDFDMASKVEGQESQMVTFELDPGQVIRAEAGNLVFMEDGIEMDTNTGGGASSMFRRVITGQNMFVTDYVNRGDRTSK--VGLGTDVPSKIVRLPLAAYGGEVICQRGAFLAGSHTIDIQV 206
            D +    P++FD+ASK+EG+ESQ+VT  ++PGQV+RAE+G L++M DGIEM+T +GGG S+ F+R++TGQN+F++DY   G+  ++  V LGTD PSKI+RL    YGG+++CQ+GA L  SHTIDI++
Sbjct:   98 DGVVATHPINFDIASKIEGKESQIVTVAIEPGQVLRAESGALMYMTDGIEMNTTSGGGMSAGFKRLLTGQNVFISDYTYTGESGTRGLVALGTDFPSKIIRLNPNQYGGKIVCQKGALLCASHTIDIEM 226          
BLAST of mRNA_L-elsbetiae_contig6807.15570.1 vs. uniprot
Match: A0A7S2WLF3_9STRA (Altered inheritance of mitochondria protein 24, mitochondrial n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2WLF3_9STRA)

HSP 1 Score: 147 bits (371), Expect = 1.070e-39
Identity = 66/130 (50.77%), Postives = 97/130 (74.62%), Query Frame = 0
Query:   76 VADPDHLALAKPLDFDMASKVEGQESQMVTFELDPGQVIRAEAGNLVFMEDGIEMDTNTGGGASSMFRRVITGQNMFVTDYVNRGDRTSKVGLGTDVPSKIVRLPLAAYGGEVICQRGAFLAGSHTIDIQ 205
            V   D +     +DF+ AS++EG +SQ+VT  L+PGQV+RAE+G +++M DG+EM+T+TGGG  + F+R +TGQN+F++DY  +GDR   V LGTD PSKI+RL L  + G+++CQ+GA L  SHT+DI+
Sbjct:   37 VVSSDGVVATHAIDFNTASRIEGSDSQIVTVRLEPGQVLRAESGGMMYMTDGVEMNTSTGGGVGAGFKRFLTGQNVFISDYTYKGDRFGIVALGTDFPSKIMRLSLPEWDGKIVCQKGALLCASHTVDIE 166          
BLAST of mRNA_L-elsbetiae_contig6807.15570.1 vs. uniprot
Match: A0A7S4QQY9_9STRA (Altered inheritance of mitochondria protein 24, mitochondrial n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QQY9_9STRA)

HSP 1 Score: 147 bits (372), Expect = 2.380e-39
Identity = 69/129 (53.49%), Postives = 101/129 (78.29%), Query Frame = 0
Query:   80 DHLALAKPLDFDMASKVEGQESQMVTFELDPGQVIRAEAGNLVFMEDGIEMDTNTGGGASSMFRRVITGQNMFVTDYVNRGDRTSK--VGLGTDVPSKIVRLPLAAYGGEVICQRGAFLAGSHTIDIQV 206
            D +    P++FD+ASK+EG+ESQ+VT  ++PGQV+RAE+G L++M DGIEM+T +GGG S+ F+R++TGQN+F++DY   G+  ++  V LGTD PSKI+RL    YGG+++CQ+GA L  SHTIDI++
Sbjct:   98 DGVVATHPINFDIASKIEGKESQIVTVAIEPGQVLRAESGALMYMTDGIEMNTTSGGGMSAGFKRLLTGQNVFISDYTYTGESGTRGLVALGTDFPSKIIRLNPNQYGGKIVCQKGALLCASHTIDIEM 226          
BLAST of mRNA_L-elsbetiae_contig6807.15570.1 vs. uniprot
Match: A0A7S3L252_9STRA (Altered inheritance of mitochondria protein 24, mitochondrial n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L252_9STRA)

HSP 1 Score: 146 bits (368), Expect = 4.620e-39
Identity = 69/120 (57.50%), Postives = 95/120 (79.17%), Query Frame = 0
Query:   86 KPLDFDMASKVEGQESQMVTFELDPGQVIRAEAGNLVFMEDGIEMDTNTGGGASSMFRRVITGQNMFVTDYVNRGDR-TSKVGLGTDVPSKIVRLPLAAYGGEVICQRGAFLAGSHTIDI 204
            +P+DFD+ SK+EG ESQ+VT  L+PGQV+RAE+G +++M  G+EM+T TGGG SS F R++TGQN F++DY  +G+  T +V LGTD PSKI+RL +  YGG+++CQ+GA L  SHTIDI
Sbjct:   70 RPIDFDIQSKIEGNESQIVTITLEPGQVLRAESGAMMYMTAGVEMNTTTGGGLSSGFSRMLTGQNFFISDYSYQGETGTGQVALGTDFPSKILRLNVPEYGGKLVCQKGALLCASHTIDI 189          
BLAST of mRNA_L-elsbetiae_contig6807.15570.1 vs. uniprot
Match: A0A7S4J9C2_9STRA (Altered inheritance of mitochondria protein 24, mitochondrial n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J9C2_9STRA)

HSP 1 Score: 147 bits (370), Expect = 5.220e-39
Identity = 92/215 (42.79%), Postives = 133/215 (61.86%), Query Frame = 0
Query:    2 LTSRGVTSTARRLALLRGSSGRLAVPKHSGNLYP---TASALVA---PLATSTSAVRRSRSKPKPSSGSDITAGGSNAP--AVADPDHLALAKPLDFDMASKVEGQESQMVTFELDPGQVIRAEAGNLVFMEDGIEMDTNTGGGASSMFRRVITGQNMFVTDYVNRGD--RTSKVGLGTDVPSKIVRLPLAAYGGEVICQRGAFLAGSHTIDIQV 206
            L+  G  S +  LA  R  +G  +   H   L+P   TASA +    P  T     RR      P S + +  GG N P  A A  D + +A P+DFD++SKVEG+ESQ+VT  + PGQ++RAE+G +++M  G+ M+T TGGG S+ F+R++TGQN+F++DY   G+   T  V LGTD PSKI+RL +  YGG+++ Q+GA L  +HTIDI++
Sbjct:   14 LSQGGACSGSANLAR-RSLAGSASSTSHLSVLHPPLLTASAQLGCFDPARTKEPFQRRRYFSSTPDSDTPVAVGGENLPEGAKASSDGV-VAVPIDFDVSSKVEGKESQIVTVAIKPGQILRAESGAMMYMTQGVSMNTTTGGGLSAGFKRMLTGQNVFISDYSYEGEPGTTGLVALGTDFPSKIIRLNVDQYGGKIVAQKGALLCATHTIDIEM 226          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6807.15570.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G1U0_ECTSI4.710e-6696.49Altered inheritance of mitochondria protein 24, mi... [more]
A0A1Z5KFL0_FISSO1.510e-4154.47Altered inheritance of mitochondria protein 24, mi... [more]
A0A6U0KGL8_9STRA7.380e-4153.49Altered inheritance of mitochondria protein 24, mi... [more]
A0A7S3L1B2_9STRA2.520e-4057.50Altered inheritance of mitochondria protein 24, mi... [more]
A0A7S1VUA2_9STRA2.900e-4050.00Altered inheritance of mitochondria protein 24, mi... [more]
A0A7S4QQK5_9STRA1.000e-3953.49Altered inheritance of mitochondria protein 24, mi... [more]
A0A7S2WLF3_9STRA1.070e-3950.77Altered inheritance of mitochondria protein 24, mi... [more]
A0A7S4QQY9_9STRA2.380e-3953.49Altered inheritance of mitochondria protein 24, mi... [more]
A0A7S3L252_9STRA4.620e-3957.50Altered inheritance of mitochondria protein 24, mi... [more]
A0A7S4J9C2_9STRA5.220e-3942.79Altered inheritance of mitochondria protein 24, mi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002838Mitochondrial biogenesis protein AIM24PFAMPF01987AIM24coord: 95..210
e-value: 5.1E-24
score: 85.2
IPR036983Mitochondrial biogenesis AIM24 superfamilyGENE3D3.60.160.10coord: 89..214
e-value: 4.4E-32
score: 113.0
NoneNo IPR availablePANTHERPTHR43657FAMILY NOT NAMEDcoord: 91..208
IPR016031Tryptophan RNA-binding attenuator protein-like domain superfamilySUPERFAMILY51219TRAP-likecoord: 93..210

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6807contigL-elsbetiae_contig6807:8458..10335 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6807.15570.1mRNA_L-elsbetiae_contig6807.15570.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig6807 8458..10335 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig6807.15570.1 ID=prot_L-elsbetiae_contig6807.15570.1|Name=mRNA_L-elsbetiae_contig6807.15570.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=215bp
MLTSRGVTSTARRLALLRGSSGRLAVPKHSGNLYPTASALVAPLATSTSA
VRRSRSKPKPSSGSDITAGGSNAPAVADPDHLALAKPLDFDMASKVEGQE
SQMVTFELDPGQVIRAEAGNLVFMEDGIEMDTNTGGGASSMFRRVITGQN
MFVTDYVNRGDRTSKVGLGTDVPSKIVRLPLAAYGGEVICQRGAFLAGSH
TIDIQVTRQNLGVM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002838AIM24
IPR036983AIM24_sf
IPR016031Trp_RNA-bd_attenuator-like_dom