prot_L-elsbetiae_contig68.15558.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig68.15558.1
Unique Nameprot_L-elsbetiae_contig68.15558.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length130
Homology
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BLAST of mRNA_L-elsbetiae_contig68.15558.1 vs. uniprot
Match: A0A6H5JKL9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKL9_9PHAE)

HSP 1 Score: 85.1 bits (209), Expect = 1.190e-16
Identity = 59/121 (48.76%), Postives = 69/121 (57.02%), Query Frame = 0 
Query:   32 DAAGAGA-----AQSPAADLCDDELCVVSLGLHDLEVFVARPSAADFGAPSFESPQPAPLGAES-------------ETQPS-----PASENGCCLQAGLSNAEGLVLPFSVDFSHVLTAR 129
            DAAGA A     A + AA+    ELCV+SLGL  L+VFVARPS +DFG PS +   P+P   E              E QP+     PA   G CL+ GLSN EGLVLPF VDF HV+ AR
Sbjct: 2001 DAAGAAAGVXXAADTDAAETTAAELCVMSLGLEGLQVFVARPSMSDFG-PSQQESSPSPTQPEEAVPAGLRGADDGQERQPTAPAPAPAGTTGRCLRGGLSNGEGLVLPFRVDFKHVILAR 2120
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig68.15558.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JKL9_9PHAE1.190e-1648.76Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig68contigL-elsbetiae_contig68:42446..42835 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig68.15558.1mRNA_L-elsbetiae_contig68.15558.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig68 42446..42835 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig68.15558.1 ID=prot_L-elsbetiae_contig68.15558.1|Name=mRNA_L-elsbetiae_contig68.15558.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=130bp
DPTAAPATAPGDPGWSDAQRAGAPGDGADVGDAAGAGAAQSPAADLCDDE
LCVVSLGLHDLEVFVARPSAADFGAPSFESPQPAPLGAESETQPSPASEN
GCCLQAGLSNAEGLVLPFSVDFSHVLTARP
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