prot_L-elsbetiae_contig6798.15553.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig6798.15553.1
Unique Nameprot_L-elsbetiae_contig6798.15553.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length542
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6798.15553.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 2..294
e-value: 2.2E-10
score: 41.5
IPR008615FNIPPFAMPF05725FNIPcoord: 205..246
e-value: 2.2E-4
score: 21.3
coord: 88..131
e-value: 3.4E-7
score: 30.3
coord: 157..199
e-value: 6.5E-7
score: 29.4
coord: 330..373
e-value: 7.7E-8
score: 32.4
coord: 470..513
e-value: 2.8E-7
score: 30.6
coord: 44..86
e-value: 3.5E-5
score: 23.9
NoneNo IPR availablePANTHERPTHR32134UNCHARACTERIZEDcoord: 98..312
coord: 12..132
coord: 189..403
coord: 318..534
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 121..466

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6798contigL-elsbetiae_contig6798:816..2441 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6798.15553.1mRNA_L-elsbetiae_contig6798.15553.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig6798 788..2957 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig6798.15553.1 ID=prot_L-elsbetiae_contig6798.15553.1|Name=mRNA_L-elsbetiae_contig6798.15553.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=542bp
MQSTAIEQWAGSLEDISFGDAFNECIRGVVWPTLVRKLSFGKKFNRPVDD
VVWPASLRVLSFGDAFAQPIAGDVWPASLQELSLGNAFNRPIAGVLWPDS
LQKLSLGGRFNQPIAAVVWPASLQQLSFGTFNRGFNQPISGITWPATLRK
LSFGFSFNQPIAKITWPATLQQLSFGHSFNQPLARVVWPASLQQLSFGSN
YCSAFNQPITGITWPASIQQLEFGGGFDQLITEVVWPASLQKLSVGNPPI
DDVVWPTSLQELCFGRNFNESIAGVVWPASLQQLTLGNPPINDVVWPVSL
EWLCFESFNRPIIGVAWPASLLHLAMGECFNQPIIGVVWPPSLQRLWIGG
DFNQPITGVVWPASLLQLYFGNDFNQPIAGVVWPASLQELGFSAYPTSFD
QPIVGVSWPASLVKLEFGDAFNQPIAAVGVPWPASLVTLDLGGAFNQPIA
GVVWPASLQELEFGGYRTSFNQPIVGISWPASLVKVSFGDAFNQPIAGVV
WPASLQELEFGYDKSNFDQPIVGVEWPASLRSVTRGGAILL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf
IPR008615FNIP