prot_L-elsbetiae_contig675.15500.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig675.15500.1
Unique Nameprot_L-elsbetiae_contig675.15500.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length755
Homology
BLAST of mRNA_L-elsbetiae_contig675.15500.1 vs. uniprot
Match: A0A6H5KJK4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJK4_9PHAE)

HSP 1 Score: 161 bits (407), Expect = 4.650e-37
Identity = 245/629 (38.95%), Postives = 283/629 (44.99%), Query Frame = 0
Query:    1 MYFPPPADSGGRARTQXXXXXXXXXXXXXXXXXXXXXXXXXX-----SNLARSRNDAACAGAEVGDASFLGFGFDPSNDEWGEDGAGGREEGKAGGAC------DLGWGGLDANTDIASSRERGTEREXXXXXXXGYAFDAEGRSTSVPDINPHWSYEGAIGGQTRSARARSSSFYEGDDDEIMACINGEAP-AEKPPSRSSSVADRSDLCRYGSLAYSSSGDFSNSAELDALLRHAPRNNSSGLTASQXXXXXXXXXXXXXXXXXXXXA---------MVLTPVEAGRRQLGKRELDALEAGLKAPVPGCRKYSSRADNRDLSSDSDEGSEDEEEAYYEGERXXXXXXXXXXXXXXXXXAEEGRISPI----------------------EHDYRD---EGSLAPVGSPPXXXPLQ--MALPGPLAFGGGVVADDGVDPVHYGDGRGEDDGGGIMSSSSAG-----SLQALGGGGHVFPPGVDPFLSVIGSDGGG--GLPLSPRAAMMSSGMATETXXXXXXXXXXXXXXXXXXXXXXXXXXXRVSPVVGDGDRSELDPPGMNIPSPRRPAPVLWPQAEGGAPPEVVAA--GSEAPSLACEPG--AXXXXXXXSPPAMLASLSLGPAP 570
            MYF PP D GG  R +                               S ++ +R  +A A A VG A+F+      S D  G       ++  A G        DLGWG +     +    E G   E         A DA+ R  +VPDI+PHW +  A+GG+TRSARARSSSFYEGDD +++ACINGEAP A K   RS SV D  DL   G       GDFS S +LD +LR   R  +SGLTASQ                              M L  V  GRRQLG REL AL+AGL+AP    RK+S   D+RDLSSDSD  SE           XXXXXXXXXXXXXXXXX       P+                      E+DYR+   EG   P     XXX       LP P A+  G   D  V P H                         SLQAL GG HV P GVDPFLS  G       GL L+PRA MMS+G     XXXXXXXXXXXXXXXXXXXXXXX       P V     +  D  G N+     P   LWP ++ G P     A  G     L CE G  +       SPP M ASLSL  AP
Sbjct:    1 MYFQPPEDRGGGGRERVGSLHQAAGGAESPAAGGANIMGSAPATFCPSPISPTRPPSALAAAAVG-AAFIALDERDSCD-LGHHAPSALDDSAAAGRAPSSDNIDLGWGAM--GNALREEDEDGEAEEAGEGYSFAAADDAQ-RPLTVPDIDPHWGFGCAMGGETRSARARSSSFYEGDDADMLACINGEAPPANKSSRRSFSVTDVDDLLHGGGSG--GGGDFSPSCDLDEMLRPT-RGRTSGLTASQAAAARSAAAPVLATAAGGVDGGRLPGDGMPMALGAVAPGRRQLGPRELQALQAGLQAPG---RKFSG-GDDRDLSSDSDLSSEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPLCSRDGGGYCSRRQDGVADHHATEYDYREREEEGRDHPXXXXXXXXXXXXIQQLPDPFAYASGGAGDGEVLPPHLSGXXXXXXXXXXXXXXXXXXXXXQSLQALVGG-HVLPAGVDPFLSAPGGXXXXXXGLALNPRAMMMSAGRMASAXXXXXXXXXXXXXXXXXXXXXXXPPHS--PPRVRRSATAAGDFGGGNVSRSSTPPRDLWPASDDGPPAAATFAVVGEVHGGLTCEAGGGSPAGGSQCSPPVMPASLSLSAAP 614          
BLAST of mRNA_L-elsbetiae_contig675.15500.1 vs. uniprot
Match: D8LMQ0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMQ0_ECTSI)

HSP 1 Score: 79.0 bits (193), Expect = 1.970e-14
Identity = 34/48 (70.83%), Postives = 43/48 (89.58%), Query Frame = 0
Query:  133 RSTSVPDINPHWSYEGAIGGQTRSARARSSSFYEGDDDEIMACINGEA 180
            R  +VPDI+PHW ++ A+GG+TRSARARSSSFYEGDD +++ACINGEA
Sbjct:   28 RPLTVPDIDPHWGFDCAVGGETRSARARSSSFYEGDDADMLACINGEA 75          
BLAST of mRNA_L-elsbetiae_contig675.15500.1 vs. uniprot
Match: D8LMQ1_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMQ1_ECTSI)

HSP 1 Score: 59.7 bits (143), Expect = 5.420e-6
Identity = 75/139 (53.96%), Postives = 82/139 (58.99%), Query Frame = 0
Query:  181 PAEKPPSRSSSVADRSDLCRYGSLAYSSSGDFSNSAELDALLRHAPRNNSSGLTASQXXXXXXXXXXXXXXXXXXXXA--------MVLTPVEAGRRQLGKRELDALEAGLKAPVPGCRKYSSRADNRDLSSDSDEGSE 311
            P  K   RS SV D  DL   G       G+FS S +LD +LR   R  +SGLTASQ   XXXXXXXXXXXXXXXXX         M L  V  GRRQLG REL AL+AGL+AP    R+ S   D RDLSSDSD  SE
Sbjct:    5 PENKLSRRSFSVTDVDDLLYGGGSG--GGGNFSPSCDLDEMLRPT-RGRTSGLTASQAAAXXXXXXXXXXXXXXXXXXXXXXXXXXMALGAVAPGRRQLGPRELQALQAGLQAPG---RQISGGGD-RDLSSDSDLSSE 136          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig675.15500.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KJK4_9PHAE4.650e-3738.95Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LMQ0_ECTSI1.970e-1470.83Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LMQ1_ECTSI5.420e-653.96Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR01217PRICHEXTENSNcoord: 568..593
score: 29.23
coord: 474..490
score: 35.29
coord: 503..520
score: 32.22
coord: 602..614
score: 46.15
coord: 361..377
score: 35.29

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig675contigL-elsbetiae_contig675:25786..31176 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig675.15500.1mRNA_L-elsbetiae_contig675.15500.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig675 25611..31176 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig675.15500.1 ID=prot_L-elsbetiae_contig675.15500.1|Name=mRNA_L-elsbetiae_contig675.15500.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=755bp
MYFPPPADSGGRARTQQSHGGEVVSAIQDTTTTTTMPQDGGGSNLARSRN
DAACAGAEVGDASFLGFGFDPSNDEWGEDGAGGREEGKAGGACDLGWGGL
DANTDIASSRERGTEREEEEEEEEGYAFDAEGRSTSVPDINPHWSYEGAI
GGQTRSARARSSSFYEGDDDEIMACINGEAPAEKPPSRSSSVADRSDLCR
YGSLAYSSSGDFSNSAELDALLRHAPRNNSSGLTASQAAAAKSASVVVAA
AAAGGGGAMVLTPVEAGRRQLGKRELDALEAGLKAPVPGCRKYSSRADNR
DLSSDSDEGSEDEEEAYYEGEREGEAFYSREQDGEAFYPAEEGRISPIEH
DYRDEGSLAPVGSPPPPPPLQMALPGPLAFGGGVVADDGVDPVHYGDGRG
EDDGGGIMSSSSAGSLQALGGGGHVFPPGVDPFLSVIGSDGGGGLPLSPR
AAMMSSGMATETATAAAAAAFPLAVALPLPPPHSPPPRPRVSPVVGDGDR
SELDPPGMNIPSPRRPAPVLWPQAEGGAPPEVVAAGSEAPSLACEPGAGS
PSSLCSPPAMLASLSLGPAPPPPRSPPPPPSPSIDDEISLQSPVASPPAP
PPSQLAPLPPPPEPLAPSPPRPPTPDAPSSEAPSPTGDGRSSEGGESGRA
GSSSSLPYDASDEGRGGRGRGSGPVGGSDAGGCGSGGQVNPLMPPPPPPT
LRCGASYGSGSSGGGAGCRIGPAGSGSFGSGGGLGSTYRSIPSGSFNSGG
SAGGG
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