prot_L-elsbetiae_contig6741.15489.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig6741.15489.1
Unique Nameprot_L-elsbetiae_contig6741.15489.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length773
Homology
BLAST of mRNA_L-elsbetiae_contig6741.15489.1 vs. uniprot
Match: A0A6H5JG49_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG49_9PHAE)

HSP 1 Score: 479 bits (1234), Expect = 7.890e-147
Identity = 397/786 (50.51%), Postives = 455/786 (57.89%), Query Frame = 0
Query:    1 VSQCRDLQERPNPLVLARLARADRE--HAALAXXXXXXXXXXXXXXXDDGRDFSSLPGRPRRRHRTLDLGACRLTDRELRVLLHVLSEEHGGDKAAAAVAAXGEAASGESAGTAGPVRFSALLLGGNPGIGAGALGALWDGSGCG----GGGGRKSLFPFLVRLDLSRCGLTAADLAGLASAHGGXXXXXXXXXXFVSVCLRALVLRDNPFTRVRTGDXXXXXXXXXXXXXXXXXXXXQGAQHWIEPARRGVAALRDLIARAPALELLDVSGCSPIPDGPAGRLYSPEVSQLLASALSGGLEARVVSKVAPDASGAGYSXXXXXXXXXXDE---SDGRAQVSALRIGNNRFSRSSWRRLLEHLASHPPKELDLAFGSALPRRSAAAVAFDAAESRMAGRDTPSSAAVXXXXXXXXXXXXXXAPSAGPLESESSSAGDSTPEQSLGELLAATVLPADAPGIEILNLTGSAGLLL-------QRREA-GGDGAEDGAHPSLSPSACPATAAFLMLLRDALMSPLCRATHLLLSGVRGSPLPPERANSTVAAXXXXXXXXXENAHSFPPDSDRGQRALRPFGPDDAKSICEAASACASLRCLDLAGCDLSGPAGASAXXXXXSCLARSGGGDGDDGYGVPVAGG-LDRLSLRACGLGASGLSTVMRAVVALPG---DPGPGRRREVPPPRLPGLLDLSDNIPPVAGDAASVDEARRGREAGRRPSGQGAGSGDADAAALSELAGSARALQLEGVASVAVCFDPRRPPASRHQTSTNHAPALIDLSGNGL 765
            + +C  LQE+PNPL   RLA+ D      ALA XXXXXXXXXXXXXX         P  P   H+TLDLGACRLTDRELRVLLHVLS   GG    AAVAA   +  G+ A T  P R  AL+L GNPGIGAGAL  L  G G      G GG  SLF  L+RL+LS C LTAADL G +S+  G            +VCL ALVLRDNP TR+R                            WIEPAR+G AAL+DLIARAP+L++LDVSGCS IPDGPAGRLYSP+VS LLASAL  GLEARVV+     A+GAG            DE   SDGRAQVS LR+GNNRFS  SW  +LE L+S PP+ELDL+F SALP RSAA            G  T ++ A+               P   P            P Q+LGELLAATVLPADAPG+E LNLTGS GLLL       QRR   GG G ED + P    S+     AF++LLRDALMSPLC  THLLLSGVRG              XXXXXXXXX    +              FGP DAKS+CEAASACASLRCLDLAGCDLSGP GA+A     SCL  +   D +D  G+ +AGG L RLSLRACGL A+GL+ V+RA+VA P    +PG  R+  V    LP LLDLSDN P V    A+V  AR  ++ G R         +AD   L+ELAG  R L+ E + SVAV  D RR       +S     AL+DLSGNGL
Sbjct:  966 LDKCDHLQEKPNPLACTRLAKVDHRGLDTALAAXXXXXXXXXXXXXXXXXXXXXXXPPAP---HQTLDLGACRLTDRELRVLLHVLSGGRGGVGPDAAVAAA-TSGGGQGAPTP-PPRLGALVLNGNPGIGAGALRELCGGRGVNASRDGNGG--SLFSSLLRLELSACHLTAADLEGFSSS--GARPPPSEQTAAATVCLEALVLRDNPLTRLRE--------------RGPVDGVNDDDDAWIEPARKGTAALQDLIARAPSLDVLDVSGCSQIPDGPAGRLYSPQVSDLLASALRAGLEARVVAGKLAAANGAGRVADGSSGDGGNDERSESDGRAQVSTLRMGNNRFSWESWVDVLEVLSSAPPRELDLSFASALPGRSAAT-------GDGVGTATAAAVALTPVGGGNNDSPGAVTPPLRPAP----------PAQTLGELLAATVLPADAPGVETLNLTGSTGLLLLDDRRRQQRRGVEGGVGIEDPSEPLACLSSL-GMEAFVLLLRDALMSPLCETTHLLLSGVRGPXXXXXXXXXXXXXXXXXXXXXXXXXXAAV------------FGPRDAKSLCEAASACASLRCLDLAGCDLSGPVGAAAAAAAVSCLISN---DDEDEVGLGMAGGVLRRLSLRACGLEAAGLAAVVRALVAEPEGGLEPGTRRKGRV----LPKLLDLSDNRPLVG---AAVGTARWEQDRGLR---------EAD---LTELAGLLRVLEREFMVSVAVTGDQRRAFGRPRVSSGREPAALVDLSGNGL 1676          
BLAST of mRNA_L-elsbetiae_contig6741.15489.1 vs. uniprot
Match: D8LDQ0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDQ0_ECTSI)

HSP 1 Score: 441 bits (1135), Expect = 3.220e-133
Identity = 380/769 (49.41%), Postives = 437/769 (56.83%), Query Frame = 0
Query:    1 VSQCRDLQERPNPLVLARLARADREHAALAXXXXXXXXXXXXXXXDDGRDFSSLPGRPRRRHRTLDLGACRLTDRELRVLLHVLSEEHGGDKAAAAVAAXGEAASGESAGTAGPV---RFSALLLGGNPGIGAGALGALWDG-------------SGCGGGGGRKSLFPFLVRLDLSRCGLTAADLAGLASAHGGXXXXXXXXXXFVSVCLRALVLRDNPFTRVRTGDXXXXXXXXXXXXXXXXXXXXQGAQHWIEPARRGVAALRDLIARAPALELLDVSGCSPIPDGPAGRLYSPEVSQLLASALSGGLEARVVSKVAPDASGAGYSXXXXXXXXXXDE---SDGRAQVSALRIGNNRFSRSSWRRLLEHLASHPPKELDLAFGSALPRRSAAAVAFDAAESRMAGRDTPSSAAVXXXXXXXXXXXXXXAPSAGPLESESSSAGDSTPEQSLGELLAATVLPADAPGIEILNLTGSAGLLLQRREAGGDGAEDGAHPSL----SPSACPATA---AFLMLLRDALMSPLCRATHLLLSGVRGSPLPPERANSTVAAXXXXXXXXXENAHSFPPDSDRGQRALRPFGPDDAKSICEAASACASLRCLDLAGCDLSGPAGASAXXXXXSCLARSGGGDGDDGYGVPVAGG-LDRLSLRACGLGASGLSTVMRAVVALPGD-PGPGRRREVPPPRLPGLLDLSDNIPPVAGDAASVDEARRGREAGRRPSGQGAGSGDADAAALSELAGSARALQLEGVASVAVCFDPRR 741
            + +C  LQE+PNPL  ARLA+A+      A   XXXXXXXX     DG D +     P   H+ LDLGACRLTDRELRVLLHVLS   GG    AAV  X             P+   R  AL+L GNPGIGAGAL  L  G             +G GG     SLF  L+RL+LS C LTAADL G +S   G            +VCLRALVLRDNP TR+R                       +    WIEPAR+G  AL+ LIARAP+LE+LDVSGCS IPDGP  RLYSP+VS LLASALS GLEARVV+     A+GAG            DE   SDGRAQVS LR+GNNRFSR SW  +LE L+S+PP+ELDL+F S LP RSAA          +    T      XXXXXXXXXXX    P   P            P Q+LGELLAATVLPADAPG+E LNLTGS GLLL                      +P ACP+++   AFL+LLRD LMSPLC  THLLLSGVRG              XXXXXXXXX    +              FGP DAKS+CEAASACASLRCLDLAGCDLSGP GA+A     SCL  +     +D  G+ +AGG L RLSLRAC LGA+GL+ V+RA+VA PG   GPG RR+     LP LLDLSDN P +AG  A+V  AR  ++ G          G+AD   L+ELAG  R L+ E + SVAV  D RR
Sbjct:  898 LEKCHHLQEKPNPLACARLAQAEHRGLDTAPAAXXXXXXXXVDPACDG-DNTHRHRSPPAPHQALDLGACRLTDRELRVLLHVLSRGRGGVGPDAAVXXXXXXXXXXX-----PMPSPRLGALVLNGNPGIGAGALRELCGGXXXXXXXXMNASRNGSGG-----SLFSSLLRLELSACRLTAADLEGFSS--NGAGPPSFDQTAAATVCLRALVLRDNPLTRLRE--------------RGPVDGGNEDEDAWIEPARKGTVALQHLIARAPSLEVLDVSGCSQIPDGPVRRLYSPQVSDLLASALSAGLEARVVAGKLAAATGAGRVADGSGGDGGNDERSESDGRAQVSTLRMGNNRFSRESWGDVLEVLSSNPPRELDLSFASVLPGRSAATA------DGVVTTATXXXXXXXXXXXXXXXXXGAVTPPPRPAP----------PAQTLGELLAATVLPADAPGVETLNLTGSTGLLLXXXXXXXXXXXXXXXXXXXXXXAPLACPSSSGMEAFLLLLRDTLMSPLCETTHLLLSGVRGPXXXXXXXXXXXXXXXXXXXXXXXXXXAAV------------FGPRDAKSLCEAASACASLRCLDLAGCDLSGPVGAAAAAAAVSCLISN---HDEDEVGLGMAGGRLRRLSLRACALGAAGLAVVVRALVAEPGGGSGPGTRRKGR--SLPKLLDLSDNRP-LAG--AAVGTARPEQDGGL---------GEAD---LTELAGLVRVLEREFMVSVAVTRDQRR 1591          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6741.15489.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JG49_9PHAE7.890e-14750.51Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LDQ0_ECTSI3.220e-13349.41Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 58..646

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6741contigL-elsbetiae_contig6741:844..4604 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6741.15489.1mRNA_L-elsbetiae_contig6741.15489.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig6741 844..4604 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig6741.15489.1 ID=prot_L-elsbetiae_contig6741.15489.1|Name=mRNA_L-elsbetiae_contig6741.15489.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=773bp
VSQCRDLQERPNPLVLARLARADREHAALAATSSAAAAAAAANNGDDGRD
FSSLPGRPRRRHRTLDLGACRLTDRELRVLLHVLSEEHGGDKAAAAVAAA
GEAASGESAGTAGPVRFSALLLGGNPGIGAGALGALWDGSGCGGGGGRKS
LFPFLVRLDLSRCGLTAADLAGLASAHGGGGSGGGGGGGFVSVCLRALVL
RDNPFTRVRTGDGGAGGRGRGGGGGGGGVGAGQGAQHWIEPARRGVAALR
DLIARAPALELLDVSGCSPIPDGPAGRLYSPEVSQLLASALSGGLEARVV
SKVAPDASGAGYSGDGYGGNGGGDESDGRAQVSALRIGNNRFSRSSWRRL
LEHLASHPPKELDLAFGSALPRRSAAAVAFDAAESRMAGRDTPSSAAVAV
AAAAGAAAGIGVAPSAGPLESESSSAGDSTPEQSLGELLAATVLPADAPG
IEILNLTGSAGLLLQRREAGGDGAEDGAHPSLSPSACPATAAFLMLLRDA
LMSPLCRATHLLLSGVRGSPLPPERANSTVAAVAAAAAAAAENAHSFPPD
SDRGQRALRPFGPDDAKSICEAASACASLRCLDLAGCDLSGPAGASAAAA
AVSCLARSGGGDGDDGYGVPVAGGLDRLSLRACGLGASGLSTVMRAVVAL
PGDPGPGRRREVPPPRLPGLLDLSDNIPPVAGDAASVDEARRGREAGRRP
SGQGAGSGDADAAALSELAGSARALQLEGVASVAVCFDPRRPPASRHQTS
TNHAPALIDLSGNGLAFDVGNA*
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